RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 IGFBP4P22692 258 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 CDC25AP30304 524 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 ARL2P36404 184 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 GATMP50440 423 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 RESTQ13127 1097 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 GRB10Q13322 594 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 ARL6IP4Q66PJ3 421 aaKnown RBP22.66■■□□□ 1.22
FOXA1-203ENST00000553751 FIBCD1Q8N539 461 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 RNF149Q8NC42 400 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 ASAP3Q8TDY4 903 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 MMTAG2Q9BU76 263 aaKnown RBP22.66■■□□□ 1.22
FOXA1-203ENST00000553751 MINDY3Q9H8M7 445 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 LRFN2Q9ULH4 789 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 MTMR6Q9Y217 621 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 PCDHB7Q9Y5E2 793 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 RALGAPA2Q2PPJ7 1873 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 POU3F3P20264 500 aaPredicted RBP22.65■■□□□ 1.22
FOXA1-203ENST00000553751 BTG3Q14201 252 aaPredicted RBP22.65■■□□□ 1.22
FOXA1-203ENST00000553751 MXD4Q14582 209 aaPredicted RBP22.65■■□□□ 1.22
FOXA1-203ENST00000553751 EPC2Q52LR7 807 aa22.65■■□□□ 1.22
FOXA1-203ENST00000553751 KRT79Q5XKE5 535 aa22.65■■□□□ 1.22
FOXA1-203ENST00000553751 SRGAP1Q7Z6B7 1085 aa22.65■■□□□ 1.22
FOXA1-203ENST00000553751 CMTR2Q8IYT2 770 aaKnown RBP22.65■■□□□ 1.22
FOXA1-203ENST00000553751 SAMD11Q96NU1 681 aa22.65■■□□□ 1.22
FOXA1-203ENST00000553751 POLR3FQ9H1D9 316 aaPredicted RBP22.65■■□□□ 1.22
FOXA1-203ENST00000553751 ELAC1Q9H777 363 aaKnown RBP22.65■■□□□ 1.22
FOXA1-203ENST00000553751 CHST12Q9NRB3 414 aa22.65■■□□□ 1.22
FOXA1-203ENST00000553751 DDX19AQ9NUU7 478 aaKnown RBP22.65■■□□□ 1.22
FOXA1-203ENST00000553751 TMEM161AQ9NX61 479 aa22.65■■□□□ 1.22
FOXA1-203ENST00000553751 KIAA1024Q9UPX6 916 aa22.65■■□□□ 1.22
FOXA1-203ENST00000553751 VWA3AA6NCI4 1184 aa22.64■■□□□ 1.21
FOXA1-203ENST00000553751 GLRA2P23416 452 aa22.64■■□□□ 1.21
FOXA1-203ENST00000553751 CAPSQ13938 189 aa22.64■■□□□ 1.21
FOXA1-203ENST00000553751 PADI6Q6TGC4 694 aa22.64■■□□□ 1.21
FOXA1-203ENST00000553751 CATSPER4Q7RTX7 472 aa22.64■■□□□ 1.21
FOXA1-203ENST00000553751 TMEM192Q8IY95 271 aa22.64■■□□□ 1.21
FOXA1-203ENST00000553751 MCPH1Q8NEM0 835 aa22.64■■□□□ 1.21
FOXA1-203ENST00000553751 FBXO22Q8NEZ5 403 aa22.64■■□□□ 1.21
FOXA1-203ENST00000553751 CLP1Q92989 425 aaKnown RBP22.64■■□□□ 1.21
FOXA1-203ENST00000553751 GPRC5CQ9NQ84 441 aa22.64■■□□□ 1.21
FOXA1-203ENST00000553751 RNF216Q9NWF9 866 aaPredicted RBP22.64■■□□□ 1.21
FOXA1-203ENST00000553751 MTCH2Q9Y6C9 303 aa22.64■■□□□ 1.21
FOXA1-203ENST00000553751 PRRC2BQ5JSZ5 2229 aaKnown RBP22.63■■□□□ 1.21
FOXA1-203ENST00000553751 ARHGEF35A5YM69 484 aa22.63■■□□□ 1.21
FOXA1-203ENST00000553751 STX6O43752 255 aa22.63■■□□□ 1.21
FOXA1-203ENST00000553751 BMP15O95972 392 aa22.63■■□□□ 1.21
FOXA1-203ENST00000553751 PHKA2P46019 1235 aa22.63■■□□□ 1.21
FOXA1-203ENST00000553751 SF3A1Q15459 793 aaKnown RBP22.63■■□□□ 1.21
FOXA1-203ENST00000553751 BHMT2Q9H2M3 363 aa22.63■■□□□ 1.21
FOXA1-203ENST00000553751 AGPAT5Q9NUQ2 364 aa22.63■■□□□ 1.21
FOXA1-203ENST00000553751 DACT1Q9NYF0 836 aa22.63■■□□□ 1.21
FOXA1-203ENST00000553751 PIN4Q9Y237 131 aaKnown RBP22.63■■□□□ 1.21
FOXA1-203ENST00000553751 MRPL42Q9Y6G3 142 aaKnown RBP22.63■■□□□ 1.21
FOXA1-203ENST00000553751 FNDC1Q4ZHG4 1894 aaPredicted RBP22.62■■□□□ 1.21
FOXA1-203ENST00000553751 KIAA1671Q9BY89 1806 aa22.62■■□□□ 1.21
FOXA1-203ENST00000553751 A0A0U1RQF3 1178 aa22.62■■□□□ 1.21
FOXA1-203ENST00000553751 FGFR1P11362 822 aa22.62■■□□□ 1.21
FOXA1-203ENST00000553751 CYP11B2P19099 503 aa22.62■■□□□ 1.21
FOXA1-203ENST00000553751 PTENP60484 403 aa22.62■■□□□ 1.21
FOXA1-203ENST00000553751 POU5F1BQ06416 359 aa22.62■■□□□ 1.21
FOXA1-203ENST00000553751 TFDP1Q14186 410 aa22.62■■□□□ 1.21
FOXA1-203ENST00000553751 PAN2Q504Q3 1202 aaKnown RBP22.62■■□□□ 1.21
FOXA1-203ENST00000553751 FAM102BQ5T8I3 360 aa22.62■■□□□ 1.21
FOXA1-203ENST00000553751 FAM173BQ6P4H8 233 aa22.62■■□□□ 1.21
FOXA1-203ENST00000553751 MAEAQ7L5Y9 396 aa22.62■■□□□ 1.21
FOXA1-203ENST00000553751 ECHDC2Q86YB7 292 aa22.62■■□□□ 1.21
FOXA1-203ENST00000553751 IFNLR1Q8IU57 520 aaPredicted RBP22.62■■□□□ 1.21
FOXA1-203ENST00000553751 TRAIPQ9BWF2 469 aa22.62■■□□□ 1.21
FOXA1-203ENST00000553751 RNF19AQ9NV58 838 aa22.62■■□□□ 1.21
FOXA1-203ENST00000553751 PRUNE2Q8WUY3 3088 aa22.62■■□□□ 1.21
FOXA1-203ENST00000553751 E9PMD0 336 aa22.61■■□□□ 1.21
FOXA1-203ENST00000553751 C5orf67F2Z3F1 127 aa22.61■■□□□ 1.21
FOXA1-203ENST00000553751 GTPBP6O43824 516 aaPredicted RBP22.61■■□□□ 1.21
FOXA1-203ENST00000553751 ATF7P17544 494 aaPredicted RBP22.61■■□□□ 1.21
FOXA1-203ENST00000553751 CTNNB1P35222 781 aa22.61■■□□□ 1.21
FOXA1-203ENST00000553751 HYIQ5T013 277 aa22.61■■□□□ 1.21
FOXA1-203ENST00000553751 KCNK18Q7Z418 384 aa22.61■■□□□ 1.21
FOXA1-203ENST00000553751 ZNF598Q86UK7 904 aaKnown RBP22.61■■□□□ 1.21
FOXA1-203ENST00000553751 NFKBIZQ9BYH8 718 aa22.61■■□□□ 1.21
FOXA1-203ENST00000553751 RWDD3Q9Y3V2 267 aa22.61■■□□□ 1.21
FOXA1-203ENST00000553751 EYA4O95677 639 aa22.6■■□□□ 1.21
FOXA1-203ENST00000553751 BMPR1AP36894 532 aa22.6■■□□□ 1.21
FOXA1-203ENST00000553751 MBTD1Q05BQ5 628 aa22.6■■□□□ 1.21
FOXA1-203ENST00000553751 TWF2Q6IBS0 349 aaKnown RBP22.6■■□□□ 1.21
FOXA1-203ENST00000553751 AK8Q96MA6 479 aa22.6■■□□□ 1.21
FOXA1-203ENST00000553751 PNMA5Q96PV4 448 aa22.6■■□□□ 1.21
FOXA1-203ENST00000553751 DNM3Q9UQ16 869 aa22.6■■□□□ 1.21
FOXA1-203ENST00000553751 CLIC4Q9Y696 253 aa22.6■■□□□ 1.21
FOXA1-203ENST00000553751 TBKBP1A7MCY6 615 aa22.59■■□□□ 1.21
FOXA1-203ENST00000553751 H3BNC9 293 aa22.59■■□□□ 1.21
FOXA1-203ENST00000553751 TSPAN1O60635 241 aa22.59■■□□□ 1.21
FOXA1-203ENST00000553751 HOXA11P31270 313 aaPredicted RBP22.59■■□□□ 1.21
FOXA1-203ENST00000553751 GRIN1Q05586 938 aa22.59■■□□□ 1.21
FOXA1-203ENST00000553751 PTPAQ15257 358 aa22.59■■□□□ 1.21
FOXA1-203ENST00000553751 PCBP1Q15365 356 aaKnown RBP eCLIP22.59■■□□□ 1.21
FOXA1-203ENST00000553751 CCDC85BQ15834 202 aaPredicted RBP22.59■■□□□ 1.21
FOXA1-203ENST00000553751 MICALL1Q8N3F8 863 aa22.59■■□□□ 1.21
FOXA1-203ENST00000553751 PPM1EQ8WY54 764 aa22.59■■□□□ 1.21
FOXA1-203ENST00000553751 BSNDQ8WZ55 320 aa22.59■■□□□ 1.21
FOXA1-203ENST00000553751 LMCD1Q9NZU5 365 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms