RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 NFKBIZQ9BYH8 718 aa19.95■□□□□ 0.78
PSEN1-208ENST00000553719 OLFML3Q9NRN5 406 aa19.95■□□□□ 0.78
PSEN1-208ENST00000553719 UMODL1Q5DID0 1318 aa19.95■□□□□ 0.78
PSEN1-208ENST00000553719 LTBP2Q14767 1821 aa19.95■□□□□ 0.78
PSEN1-208ENST00000553719 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.94■□□□□ 0.78
PSEN1-208ENST00000553719 TRIM43BA6NCK2 446 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 FAM13AO94988 1023 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 GAP43P17677 238 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 NPTX2P47972 431 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 NCKAP1LP55160 1127 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 NLRP11P59045 1033 aaKnown RBP19.94■□□□□ 0.78
PSEN1-208ENST00000553719 CDC42EP1Q00587 391 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 COASYQ13057 564 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 BFSP2Q13515 415 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 MBTPS1Q14703 1052 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 RBM43Q6ZSC3 357 aaKnown RBP19.94■□□□□ 0.78
PSEN1-208ENST00000553719 SFR1Q86XK3 245 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 CCDC155Q8N6L0 562 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 TRIM43Q96BQ3 446 aaPredicted RBP19.94■□□□□ 0.78
PSEN1-208ENST00000553719 HTATIP2Q9BUP3 242 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 CELF4Q9BZC1 486 aaKnown RBP19.94■□□□□ 0.78
PSEN1-208ENST00000553719 WNT8AQ9H1J5 351 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 NUP62CLQ9H1M0 184 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 CDHR5Q9HBB8 845 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 PANK4Q9NVE7 773 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 LARSQ9P2J5 1176 aaKnown RBP19.94■□□□□ 0.78
PSEN1-208ENST00000553719 ARHGAP28Q9P2N2 729 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 SEL1LQ9UBV2 794 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 TRPV2Q9Y5S1 764 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 CDY2AQ9Y6F7 541 aa19.94■□□□□ 0.78
PSEN1-208ENST00000553719 RPN1P04843 607 aaKnown RBP19.93■□□□□ 0.78
PSEN1-208ENST00000553719 CTSHP09668 335 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 SELPP16109 830 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 ITGB8P26012 769 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 PEX3P56589 373 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 PTENP60484 403 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 DMP1Q13316 513 aaPredicted RBP19.93■□□□□ 0.78
PSEN1-208ENST00000553719 KCNB1Q14721 858 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 GPNMBQ14956 572 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 PPP2R5AQ15172 486 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 CAMK4Q16566 473 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 KIZQ2M2Z5 673 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 CCDC65Q8IXS2 484 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 RNF149Q8NC42 400 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 TMEM40Q8WWA1 233 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 ERCC4Q92889 916 aaPredicted RBP19.93■□□□□ 0.78
PSEN1-208ENST00000553719 STRA6Q9BX79 667 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 HIPK3Q9H422 1215 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 ST6GALNAC4Q9H4F1 302 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 TMEM39AQ9NV64 488 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 TMEM63CQ9P1W3 806 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 HOOK1Q9UJC3 728 aaKnown RBP19.93■□□□□ 0.78
PSEN1-208ENST00000553719 PCDHA5Q9Y5H7 936 aa19.93■□□□□ 0.78
PSEN1-208ENST00000553719 A0A087WZ62 844 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 TRAK2O60296 914 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 PPP1R37O75864 691 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 RHOBTB3O94955 611 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 MAPTP10636 758 aaKnown RBP19.92■□□□□ 0.78
PSEN1-208ENST00000553719 IDEP14735 1019 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 CRYBB1P53674 252 aaPredicted RBP19.92■□□□□ 0.78
PSEN1-208ENST00000553719 TFDP1Q14186 410 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 KMT5BQ4FZB7 885 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 ODR4Q5SWX8 454 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 LRRC8DQ7L1W4 858 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 MYCT1Q8N699 235 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 TMEM161BQ8NDZ6 487 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 ZNF668Q96K58 619 aaPredicted RBP19.92■□□□□ 0.78
PSEN1-208ENST00000553719 IFT74Q96LB3 600 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 NLRP4Q96MN2 994 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 PPP1R16BQ96T49 567 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 OSMRQ99650 979 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 FDXACB1Q9BRP7 624 aaPredicted RBP19.92■□□□□ 0.78
PSEN1-208ENST00000553719 KIFC3Q9BVG8 833 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 FGFBP2Q9BYJ0 223 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 OSBPL7Q9BZF2 842 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 CCDC113Q9H0I3 377 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 MINDY3Q9H8M7 445 aa19.92■□□□□ 0.78
PSEN1-208ENST00000553719 SRGAP2CP0DJJ0 459 aa19.91■□□□□ 0.78
PSEN1-208ENST00000553719 DARSP14868 501 aaKnown RBP19.91■□□□□ 0.78
PSEN1-208ENST00000553719 HERC4Q5GLZ8 1057 aaPredicted RBP19.91■□□□□ 0.78
PSEN1-208ENST00000553719 FBXO47Q5MNV8 452 aa19.91■□□□□ 0.78
PSEN1-208ENST00000553719 TAS1R3Q7RTX0 852 aa19.91■□□□□ 0.78
PSEN1-208ENST00000553719 NLRP7Q8WX94 980 aa19.91■□□□□ 0.78
PSEN1-208ENST00000553719 HPS3Q969F9 1004 aa19.91■□□□□ 0.78
PSEN1-208ENST00000553719 VWCEQ96DN2 955 aa19.91■□□□□ 0.78
PSEN1-208ENST00000553719 GSDMAQ96QA5 445 aa19.91■□□□□ 0.78
PSEN1-208ENST00000553719 SQORQ9Y6N5 450 aa19.91■□□□□ 0.78
PSEN1-208ENST00000553719 SCN5AQ14524 2016 aa19.9■□□□□ 0.78
PSEN1-208ENST00000553719 LRRIQ4A6NIV6 560 aa19.9■□□□□ 0.78
PSEN1-208ENST00000553719 TIMP1P01033 207 aa19.9■□□□□ 0.78
PSEN1-208ENST00000553719 IQCF3P0C7M6 154 aa19.9■□□□□ 0.78
PSEN1-208ENST00000553719 EIF4BP23588 611 aaKnown RBP19.9■□□□□ 0.78
PSEN1-208ENST00000553719 CYP2C18P33260 490 aa19.9■□□□□ 0.78
PSEN1-208ENST00000553719 PHKA2P46019 1235 aa19.9■□□□□ 0.78
PSEN1-208ENST00000553719 RGS19P49795 217 aa19.9■□□□□ 0.78
PSEN1-208ENST00000553719 CASP5P51878 434 aa19.9■□□□□ 0.78
PSEN1-208ENST00000553719 MBTD1Q05BQ5 628 aa19.9■□□□□ 0.78
PSEN1-208ENST00000553719 SKOR2Q2VWA4 1001 aaPredicted RBP19.9■□□□□ 0.78
PSEN1-208ENST00000553719 FAM26FQ5R3K3 315 aa19.9■□□□□ 0.78
PSEN1-208ENST00000553719 CCDC183Q5T5S1 534 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms