RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 ATP13A4Q4VNC1 1196 aa5.81□□□□□ -1.48
FCF1-204ENST00000553673 GPR158Q5T848 1215 aa5.81□□□□□ -1.48
FCF1-204ENST00000553673 STRA8Q7Z7C7 330 aa5.81□□□□□ -1.48
FCF1-204ENST00000553673 ATL2Q8NHH9 583 aa5.81□□□□□ -1.48
FCF1-204ENST00000553673 IL17DQ8TAD2 202 aa5.81□□□□□ -1.48
FCF1-204ENST00000553673 CALML6Q8TD86 181 aa5.81□□□□□ -1.48
FCF1-204ENST00000553673 PLEKHG4BQ96PX9 1271 aa5.81□□□□□ -1.48
FCF1-204ENST00000553673 OR14A2Q96R54 314 aa5.81□□□□□ -1.48
FCF1-204ENST00000553673 SLC39A2Q9NP94 309 aa5.81□□□□□ -1.48
FCF1-204ENST00000553673 EMC7Q9NPA0 242 aa5.81□□□□□ -1.48
FCF1-204ENST00000553673 INCENPQ9NQS7 918 aa5.81□□□□□ -1.48
FCF1-204ENST00000553673 GALNT8Q9NY28 637 aa5.81□□□□□ -1.48
FCF1-204ENST00000553673 BTBD7Q9P203 1132 aa5.81□□□□□ -1.48
FCF1-204ENST00000553673 SLC30A1Q9Y6M5 507 aa5.81□□□□□ -1.48
FCF1-204ENST00000553673 PRAMEF22A3QJZ6 481 aa5.8□□□□□ -1.48
FCF1-204ENST00000553673 RASSF10A6NK89 507 aa5.8□□□□□ -1.48
FCF1-204ENST00000553673 NEMP1O14524 444 aa5.8□□□□□ -1.48
FCF1-204ENST00000553673 POLD1P28340 1107 aa5.8□□□□□ -1.48
FCF1-204ENST00000553673 LSP1P33241 339 aa5.8□□□□□ -1.48
FCF1-204ENST00000553673 NOLC1Q14978 699 aaKnown RBP eCLIP5.8□□□□□ -1.48
FCF1-204ENST00000553673 PTPROQ16827 1216 aa5.8□□□□□ -1.48
FCF1-204ENST00000553673 RNF219Q5W0B1 726 aaPredicted RBP5.8□□□□□ -1.48
FCF1-204ENST00000553673 MAMDC4Q6UXC1 1216 aa5.8□□□□□ -1.48
FCF1-204ENST00000553673 CACTINQ8WUQ7 758 aaKnown RBP5.8□□□□□ -1.48
FCF1-204ENST00000553673 FAM89AQ96GI7 184 aa5.8□□□□□ -1.48
FCF1-204ENST00000553673 C16orf92Q96LL3 132 aa5.8□□□□□ -1.48
FCF1-204ENST00000553673 SPTLC3Q9NUV7 552 aa5.8□□□□□ -1.48
FCF1-204ENST00000553673 UCKL1Q9NWZ5 548 aa5.8□□□□□ -1.48
FCF1-204ENST00000553673 H2AFY2Q9P0M6 372 aaPredicted RBP5.8□□□□□ -1.48
FCF1-204ENST00000553673 ATP8A1Q9Y2Q0 1164 aa5.8□□□□□ -1.48
FCF1-204ENST00000553673 COL4A3BPQ9Y5P4 624 aa5.8□□□□□ -1.48
FCF1-204ENST00000553673 PEG3Q9GZU2 1588 aa5.8□□□□□ -1.48
FCF1-204ENST00000553673 HMGXB3Q12766 1538 aa5.79□□□□□ -1.48
FCF1-204ENST00000553673 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.79□□□□□ -1.48
FCF1-204ENST00000553673 UBA6A0AVT1 1052 aaPredicted RBP5.79□□□□□ -1.48
FCF1-204ENST00000553673 RAB11FIP3O75154 756 aa5.79□□□□□ -1.48
FCF1-204ENST00000553673 EYA4O95677 639 aa5.79□□□□□ -1.48
FCF1-204ENST00000553673 PTX3P26022 381 aaPredicted RBP5.79□□□□□ -1.48
FCF1-204ENST00000553673 PHC1P78364 1004 aa5.79□□□□□ -1.48
FCF1-204ENST00000553673 SMAD3P84022 425 aaKnown RBP5.79□□□□□ -1.48
FCF1-204ENST00000553673 ROM1Q03395 351 aa5.79□□□□□ -1.48
FCF1-204ENST00000553673 FAPQ12884 760 aa5.79□□□□□ -1.48
FCF1-204ENST00000553673 TOP3AQ13472 1001 aaPredicted RBP5.79□□□□□ -1.48
FCF1-204ENST00000553673 DDB1Q16531 1140 aa5.79□□□□□ -1.48
FCF1-204ENST00000553673 TTC38Q5R3I4 469 aa5.79□□□□□ -1.48
FCF1-204ENST00000553673 CXXC5Q7LFL8 322 aaKnown RBP5.79□□□□□ -1.48
FCF1-204ENST00000553673 WDR66Q8TBY9 1149 aa5.79□□□□□ -1.48
FCF1-204ENST00000553673 ERCC4Q92889 916 aaPredicted RBP5.79□□□□□ -1.48
FCF1-204ENST00000553673 FOXB1Q99853 325 aa5.79□□□□□ -1.48
FCF1-204ENST00000553673 BTBD2Q9BX70 525 aa5.79□□□□□ -1.48
FCF1-204ENST00000553673 PLA2G12BQ9BX93 195 aa5.79□□□□□ -1.48
FCF1-204ENST00000553673 PCDH12Q9NPG4 1184 aa5.79□□□□□ -1.48
FCF1-204ENST00000553673 USP36Q9P275 1121 aaKnown RBP5.79□□□□□ -1.48
FCF1-204ENST00000553673 TGM5O43548 720 aa5.78□□□□□ -1.48
FCF1-204ENST00000553673 CUTAO60888 179 aa5.78□□□□□ -1.48
FCF1-204ENST00000553673 ACRV1P26436 265 aa5.78□□□□□ -1.48
FCF1-204ENST00000553673 MC4RP32245 332 aa5.78□□□□□ -1.48
FCF1-204ENST00000553673 ECE1P42892 770 aa5.78□□□□□ -1.48
FCF1-204ENST00000553673 SESN3P58005 492 aa5.78□□□□□ -1.48
FCF1-204ENST00000553673 ALDH6A1Q02252 535 aaKnown RBP5.78□□□□□ -1.48
FCF1-204ENST00000553673 DUSP8Q13202 625 aa5.78□□□□□ -1.48
FCF1-204ENST00000553673 STAT4Q14765 748 aa5.78□□□□□ -1.48
FCF1-204ENST00000553673 ZMAT1Q5H9K5 638 aa5.78□□□□□ -1.48
FCF1-204ENST00000553673 TIGD7Q6NT04 549 aaPredicted RBP5.78□□□□□ -1.48
FCF1-204ENST00000553673 RTN4RL1Q86UN2 441 aaPredicted RBP5.78□□□□□ -1.48
FCF1-204ENST00000553673 SPATS2Q86XZ4 545 aaKnown RBP5.78□□□□□ -1.48
FCF1-204ENST00000553673 PHYKPLQ8IUZ5 450 aa5.78□□□□□ -1.48
FCF1-204ENST00000553673 ZNF808Q8N4W9 903 aaPredicted RBP5.78□□□□□ -1.48
FCF1-204ENST00000553673 C7orf31Q8N865 590 aa5.78□□□□□ -1.48
FCF1-204ENST00000553673 ZNF610Q8N9Z0 462 aa5.78□□□□□ -1.48
FCF1-204ENST00000553673 SLC5A5Q92911 643 aa5.78□□□□□ -1.48
FCF1-204ENST00000553673 FOXRED1Q96CU9 486 aaPredicted RBP5.78□□□□□ -1.48
FCF1-204ENST00000553673 C12orf65Q9H3J6 166 aaKnown RBP5.78□□□□□ -1.48
FCF1-204ENST00000553673 NOP58Q9Y2X3 529 aaKnown RBP5.78□□□□□ -1.48
FCF1-204ENST00000553673 NR2E1Q9Y466 385 aa5.78□□□□□ -1.48
FCF1-204ENST00000553673 MATN2O00339 956 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 MAFGO15525 162 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 GPR39O43194 453 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 MPIG6BO95866 241 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 ADH4P08319 380 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 POU3F3P20264 500 aaPredicted RBP5.77□□□□□ -1.49
FCF1-204ENST00000553673 AMPD3Q01432 767 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 TUBA3CQ13748 450 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 TERF2Q15554 542 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 KRTAP15-1Q3LI76 137 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 FNDC7Q5VTL7 733 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 ESRP1Q6NXG1 681 aaKnown RBP5.77□□□□□ -1.49
FCF1-204ENST00000553673 TUBA3EQ6PEY2 450 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 DDX42Q86XP3 938 aaKnown RBP eCLIP5.77□□□□□ -1.49
FCF1-204ENST00000553673 LDLRAD3Q86YD5 345 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 DNAJC10Q8IXB1 793 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 MAML3Q96JK9 1138 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 TUBGCP5Q96RT8 1024 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 AMNQ9BXJ7 453 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 OR10A5Q9H207 317 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 ZMAT4Q9H898 229 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 MMRN2Q9H8L6 949 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 KCNG1Q9UIX4 513 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 FBXO10Q9UK96 956 aa5.77□□□□□ -1.49
FCF1-204ENST00000553673 PRLP01236 227 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms