RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 LPCAT2Q7L5N7 544 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 IFNL1Q8IU54 200 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 EDC3Q96F86 508 aaKnown RBP9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 PPP1R36Q96LQ0 422 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 TGS1Q96RS0 853 aaKnown RBP9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 ECHDC1Q9NTX5 307 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 COMMD8Q9NX08 183 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 CLEC11AQ9Y240 323 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 HFM1A2PYH4 1435 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 PFDN6O15212 129 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 PRPF6O94906 941 aaKnown RBP9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 DDX58O95786 925 aaKnown RBP9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 ASPHQ12797 758 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 CCDC105Q8IYK2 499 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 MLKLQ8NB16 471 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 DEPDC7Q96QD5 511 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 CALN1Q9BXU9 219 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 NCOA2Q15596 1464 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 A0A1W2PQ72 361 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 MAP3K13O43283 966 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 MGRN1O60291 552 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 RGS2P41220 211 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 MLLT3P42568 568 aaPredicted RBP9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 NLRP10Q86W26 655 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 ELMOD2Q8IZ81 293 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 MTMR9Q96QG7 549 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 ACAT2Q9BWD1 397 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 GJB4Q9NTQ9 266 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 USP40Q9NVE5 1235 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 RRN3Q9NYV6 651 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 ANKRD30BQ9BXX2 1392 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 ZSCAN5CA6NGD5 496 aaPredicted RBP9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 STRNO43815 780 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 ENTPD5O75356 428 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 LPIN1Q14693 890 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 ZBTB41Q5SVQ8 909 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 SYDE2Q5VT97 1194 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 LRRC74BQ6ZQY2 392 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 UNC45BQ8IWX7 931 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 HNRNPABQ99729 332 aaKnown RBP9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 ZSCAN5AQ9BUG6 496 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 TEX12Q9BXU0 123 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 SEZ6LQ9BYH1 1024 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 OSBPL7Q9BZF2 842 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 HAUS4Q9H6D7 363 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 MLXIPQ9HAP2 919 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 ADGRG1Q9Y653 693 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 PARD3Q8TEW0 1356 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 RAB19A4D1S5 217 aa9.59□□□□□ -0.88
GTF2A1-203ENST00000553612 ZNF213O14771 459 aa9.59□□□□□ -0.88
GTF2A1-203ENST00000553612 ASLP04424 464 aa9.59□□□□□ -0.88
GTF2A1-203ENST00000553612 POLR2EP19388 210 aaKnown RBP9.59□□□□□ -0.88
GTF2A1-203ENST00000553612 ABCB4P21439 1286 aa9.59□□□□□ -0.88
GTF2A1-203ENST00000553612 PUDPQ08623 228 aa9.59□□□□□ -0.88
GTF2A1-203ENST00000553612 STX3Q13277 289 aa9.59□□□□□ -0.88
GTF2A1-203ENST00000553612 SLC9A5Q14940 896 aa9.59□□□□□ -0.88
GTF2A1-203ENST00000553612 SH3BP5LQ7L8J4 393 aa9.59□□□□□ -0.88
GTF2A1-203ENST00000553612 COG4Q9H9E3 785 aa9.59□□□□□ -0.88
GTF2A1-203ENST00000553612 EBF2Q9HAK2 575 aa9.59□□□□□ -0.88
GTF2A1-203ENST00000553612 NMRK1Q9NWW6 199 aa9.59□□□□□ -0.88
GTF2A1-203ENST00000553612 GMIPQ9P107 970 aa9.59□□□□□ -0.88
GTF2A1-203ENST00000553612 PNMA3Q9UL41 463 aa9.59□□□□□ -0.88
GTF2A1-203ENST00000553612 PIK3R4Q99570 1358 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 GAS8O95995 478 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 GHRP10912 638 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 CPA2P48052 419 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 RPS6KA1Q15418 735 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 LRGUKQ96M69 825 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 NAIPQ13075 1403 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 POLA1P09884 1462 aaPredicted RBP9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 MARK3P27448 753 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 EPHB2P29323 1055 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 NFIAQ12857 509 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 TMEM67Q5HYA8 995 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 ALDH16A1Q8IZ83 802 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 AGGF1Q8N302 714 aaeCLIP9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 SYT2Q8N9I0 419 aaPredicted RBP9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 SNX27Q96L92 541 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 SPATA16Q9BXB7 569 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 RAD21L1Q9H4I0 556 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 CNNM2Q9H8M5 875 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 MRPS7Q9Y2R9 242 aaKnown RBP9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 NBNO60934 754 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 ACSL3O95573 720 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 CYP1A2P05177 515 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 KITP10721 976 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 GRIN1Q05586 938 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 TCP11X2Q5H9J9 407 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 HEATR3Q7Z4Q2 680 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 STX12Q86Y82 276 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 POMGNT1Q8WZA1 660 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 NACC2Q96BF6 587 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 B3GALT6Q96L58 329 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 RNPEPL1Q9HAU8 725 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 PARVGQ9HBI0 331 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 KCNJ14Q9UNX9 436 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 ARL2BPQ9Y2Y0 163 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 PDLIM1O00151 329 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 TMED2Q15363 201 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 TRIP10Q15642 601 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms