RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 GGCXP38435 758 aa14.05□□□□□ -0.16
SHMT2-205ENST00000553474 KCNA1Q09470 495 aa14.05□□□□□ -0.16
SHMT2-205ENST00000553474 PCNX4Q63HM2 1172 aa14.05□□□□□ -0.16
SHMT2-205ENST00000553474 INTS8Q75QN2 995 aaKnown RBP14.05□□□□□ -0.16
SHMT2-205ENST00000553474 SND1Q7KZF4 910 aaKnown RBP eCLIP14.05□□□□□ -0.162e-6■■□□□ 11.8
SHMT2-205ENST00000553474 C1orf131Q8NDD1 294 aaKnown RBP14.05□□□□□ -0.16
SHMT2-205ENST00000553474 TPCN2Q8NHX9 752 aa14.05□□□□□ -0.16
SHMT2-205ENST00000553474 HDAC7Q8WUI4 952 aa14.05□□□□□ -0.16
SHMT2-205ENST00000553474 DCPSQ96C86 337 aaKnown RBP14.05□□□□□ -0.16
SHMT2-205ENST00000553474 PSMB7Q99436 277 aa14.05□□□□□ -0.16
SHMT2-205ENST00000553474 PACSIN1Q9BY11 444 aa14.05□□□□□ -0.16
SHMT2-205ENST00000553474 TBC1D22BQ9NU19 505 aa14.05□□□□□ -0.16
SHMT2-205ENST00000553474 APEX2Q9UBZ4 518 aa14.05□□□□□ -0.16
SHMT2-205ENST00000553474 AGPSO00116 658 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 HSF2BPO75031 334 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 ARP10275 920 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 KRT13P13646 458 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 MATR3P43243 847 aaKnown RBP eCLIP14.04□□□□□ -0.16
SHMT2-205ENST00000553474 MCCD1P59942 119 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-205ENST00000553474 BFSP1Q12934 665 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 PPP2R5EQ16537 467 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 MIER3Q7Z3K6 550 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 SLC30A5Q8TAD4 765 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 FAM76AQ8TAV0 307 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 RUFY1Q96T51 708 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 PGAP2Q9UHJ9 254 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 CCPG1Q9ULG6 757 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 NCANO14594 1321 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 GOLGA6CA6NDK9 693 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 SFI1A8K8P3 1242 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 PGRMC1O00264 195 aaKnown RBP14.04□□□□□ -0.16
SHMT2-205ENST00000553474 EVI5O60447 810 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 HEXIM1O94992 359 aaKnown RBP14.04□□□□□ -0.16
SHMT2-205ENST00000553474 TMEM253P0C7T8 217 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 GOLGA6DP0CG33 693 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 NOP2P46087 812 aaKnown RBP14.04□□□□□ -0.16
SHMT2-205ENST00000553474 GYS2P54840 703 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 CUL1Q13616 776 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 TNFAIP1Q13829 316 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 ZC2HC1CQ53FD0 456 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-205ENST00000553474 PADI6Q6TGC4 694 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 APOBEC3FQ8IUX4 373 aaKnown RBP14.04□□□□□ -0.16
SHMT2-205ENST00000553474 SYCP3Q8IZU3 236 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 RASGEF1CQ8N431 466 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 SCFD2Q8WU76 684 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 TMEM39BQ9GZU3 492 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 KCNH7Q9NS40 1196 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 GOLGA6AQ9NYA3 693 aa14.04□□□□□ -0.16
SHMT2-205ENST00000553474 TTC7AQ9ULT0 858 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-205ENST00000553474 ADM5C9JUS6 153 aa14.03□□□□□ -0.16
SHMT2-205ENST00000553474 DDX3XO00571 662 aaKnown RBP eCLIP14.03□□□□□ -0.161e-14■■□□□ 13.5
SHMT2-205ENST00000553474 KCNK3O14649 394 aa14.03□□□□□ -0.16
SHMT2-205ENST00000553474 SHOX2O60902 331 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-205ENST00000553474 HIP1RO75146 1068 aa14.03□□□□□ -0.16
SHMT2-205ENST00000553474 PHACTR2O75167 634 aa14.03□□□□□ -0.16
SHMT2-205ENST00000553474 TAL1P17542 331 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-205ENST00000553474 ITGB5P18084 799 aa14.03□□□□□ -0.16
SHMT2-205ENST00000553474 HADHBP55084 474 aaKnown RBP14.03□□□□□ -0.16
SHMT2-205ENST00000553474 MYL7Q01449 175 aa14.03□□□□□ -0.16
SHMT2-205ENST00000553474 MAPK7Q13164 816 aa14.03□□□□□ -0.16
SHMT2-205ENST00000553474 PEX26Q7Z412 305 aa14.03□□□□□ -0.16
SHMT2-205ENST00000553474 RFFLQ8WZ73 363 aa14.03□□□□□ -0.16
SHMT2-205ENST00000553474 MS4A14Q96JA4 679 aa14.03□□□□□ -0.16
SHMT2-205ENST00000553474 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.03□□□□□ -0.167e-8■■□□□ 13.7
SHMT2-205ENST00000553474 SYT11Q9BT88 431 aa14.03□□□□□ -0.16
SHMT2-205ENST00000553474 KIAA1683Q9H0B3 1180 aa14.03□□□□□ -0.16
SHMT2-205ENST00000553474 DNAJC12Q9UKB3 198 aa14.03□□□□□ -0.16
SHMT2-205ENST00000553474 USP20Q9Y2K6 914 aa14.03□□□□□ -0.16
SHMT2-205ENST00000553474 UBIAD1Q9Y5Z9 338 aa14.03□□□□□ -0.16
SHMT2-205ENST00000553474 ZNF536O15090 1300 aa14.02□□□□□ -0.16
SHMT2-205ENST00000553474 EXOC3O60645 756 aa14.02□□□□□ -0.16
SHMT2-205ENST00000553474 QARSP47897 775 aaKnown RBP14.02□□□□□ -0.16
SHMT2-205ENST00000553474 SLC7A5Q01650 507 aa14.02□□□□□ -0.16
SHMT2-205ENST00000553474 RASA3Q14644 834 aa14.02□□□□□ -0.16
SHMT2-205ENST00000553474 KIF22Q14807 665 aa14.02□□□□□ -0.16
SHMT2-205ENST00000553474 ENOX2Q16206 610 aaKnown RBP14.02□□□□□ -0.16
SHMT2-205ENST00000553474 MAP1SQ66K74 1059 aaPredicted RBP14.02□□□□□ -0.16
SHMT2-205ENST00000553474 XRRA1Q6P2D8 792 aa14.02□□□□□ -0.16
SHMT2-205ENST00000553474 SULF1Q8IWU6 871 aa14.02□□□□□ -0.16
SHMT2-205ENST00000553474 CD302Q8IX05 232 aa14.02□□□□□ -0.16
SHMT2-205ENST00000553474 RDM1Q8NG50 284 aa14.02□□□□□ -0.16
SHMT2-205ENST00000553474 HVCN1Q96D96 273 aa14.02□□□□□ -0.16
SHMT2-205ENST00000553474 HES6Q96HZ4 224 aa14.02□□□□□ -0.16
SHMT2-205ENST00000553474 ACCSQ96QU6 501 aa14.02□□□□□ -0.16
SHMT2-205ENST00000553474 NAP1L3Q99457 506 aaPredicted RBP14.02□□□□□ -0.16
SHMT2-205ENST00000553474 MAF1Q9H063 256 aa14.02□□□□□ -0.16
SHMT2-205ENST00000553474 INTS2Q9H0H0 1204 aaKnown RBP14.02□□□□□ -0.16
SHMT2-205ENST00000553474 SLITRK6Q9H5Y7 841 aa14.02□□□□□ -0.16
SHMT2-205ENST00000553474 WRAP73Q9P2S5 460 aaPredicted RBP14.02□□□□□ -0.16
SHMT2-205ENST00000553474 DHX15O43143 795 aaKnown RBP14.01□□□□□ -0.17
SHMT2-205ENST00000553474 PLS3P13797 630 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 SFNP31947 248 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 JAK3P52333 1124 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 DRAP1Q14919 205 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-205ENST00000553474 TCEAL1Q15170 157 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 PRAMEF18Q5VWM3 479 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 DLK2Q6UY11 383 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 GPIHBP1Q8IV16 184 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 CDAN1Q8IWY9 1227 aa14.01□□□□□ -0.17
SHMT2-205ENST00000553474 C4orf19Q8IY42 314 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms