RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 HFE2Q6ZVN8 426 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 TMC7Q7Z402 723 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 SKAP1Q86WV1 359 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 LRRC71Q8N4P6 559 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 CCDC136Q96JN2 1154 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 ZNF668Q96K58 619 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-208ENST00000553370 TCF25Q9BQ70 676 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 APOL5Q9BWW9 433 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 ZMYND12Q9H0C1 365 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 TMEM117Q9H0C3 514 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 KCNH6Q9H252 994 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 DISC1Q9NRI5 854 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 PCDHGA10Q9Y5H3 936 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 TMEM221A6NGB7 291 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 C9IYK1 514 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 M0R296 226 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 DHX15O43143 795 aaKnown RBP11.17□□□□□ -0.62
ACTN1-208ENST00000553370 PRPF3O43395 683 aaKnown RBP11.17□□□□□ -0.62
ACTN1-208ENST00000553370 REC8O95072 547 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 EYA4O95677 639 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 SP100P23497 879 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-208ENST00000553370 SFNP31947 248 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 DNM2P50570 870 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 CAMK1Q14012 370 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 TSGA10IPQ3SY00 556 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 ZNF710Q8N1W2 664 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 MRPS27Q92552 414 aaKnown RBP11.17□□□□□ -0.62
ACTN1-208ENST00000553370 EDAQ92838 391 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 PBXIP1Q96AQ6 731 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 MSLNLQ96KJ4 702 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 PHF7Q9BWX1 381 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-208ENST00000553370 MRPL9Q9BYD2 267 aaKnown RBP11.17□□□□□ -0.62
ACTN1-208ENST00000553370 ELAC1Q9H777 363 aaKnown RBP11.17□□□□□ -0.62
ACTN1-208ENST00000553370 DACT1Q9NYF0 836 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 CLEC1BQ9P126 229 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 VPS54Q9P1Q0 977 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 HCSTQ9UBK5 93 aa11.17□□□□□ -0.62
ACTN1-208ENST00000553370 MAFBQ9Y5Q3 323 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-208ENST00000553370 ZBTB42B2RXF5 422 aa11.16□□□□□ -0.62
ACTN1-208ENST00000553370 GLP2RO95838 553 aa11.16□□□□□ -0.62
ACTN1-208ENST00000553370 SFPQP23246 707 aaKnown RBP eCLIP11.16□□□□□ -0.622e-7■■□□□ 12.9
ACTN1-208ENST00000553370 ERVFC1P60507 584 aa11.16□□□□□ -0.62
ACTN1-208ENST00000553370 CCT2P78371 535 aaKnown RBP11.16□□□□□ -0.62
ACTN1-208ENST00000553370 NHLH1Q02575 133 aa11.16□□□□□ -0.62
ACTN1-208ENST00000553370 SMC1AQ14683 1233 aaKnown RBP11.16□□□□□ -0.62
ACTN1-208ENST00000553370 DUSP6Q16828 381 aa11.16□□□□□ -0.62
ACTN1-208ENST00000553370 TSR1Q2NL82 804 aaKnown RBP11.16□□□□□ -0.62
ACTN1-208ENST00000553370 MTERF2Q49AM1 385 aa11.16□□□□□ -0.62
ACTN1-208ENST00000553370 CES5AQ6NT32 575 aa11.16□□□□□ -0.62
ACTN1-208ENST00000553370 CPLX2Q6PUV4 134 aaKnown RBP11.16□□□□□ -0.62
ACTN1-208ENST00000553370 KCNT2Q6UVM3 1135 aa11.16□□□□□ -0.62
ACTN1-208ENST00000553370 MIER3Q7Z3K6 550 aa11.16□□□□□ -0.62
ACTN1-208ENST00000553370 CRIPAKQ8N1N5 446 aa11.16□□□□□ -0.62
ACTN1-208ENST00000553370 FBXL18Q96ME1 805 aa11.16□□□□□ -0.62
ACTN1-208ENST00000553370 RNF26Q9BY78 433 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-208ENST00000553370 GCOM2Q9BZD3 368 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-208ENST00000553370 C22orf23Q9BZE7 217 aa11.16□□□□□ -0.62
ACTN1-208ENST00000553370 NGRNQ9NPE2 291 aaKnown RBP11.16□□□□□ -0.62
ACTN1-208ENST00000553370 FAM217BQ9NTX9 383 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-208ENST00000553370 SPG21Q9NZD8 308 aa11.16□□□□□ -0.62
ACTN1-208ENST00000553370 LZTS1Q9Y250 596 aa11.16□□□□□ -0.62
ACTN1-208ENST00000553370 C2orf16Q68DN1 1984 aa11.16□□□□□ -0.62
ACTN1-208ENST00000553370 MSH4O15457 936 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 MARCH6O60337 910 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 GPR32O75388 356 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 ATP4AP20648 1035 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 RPS6KB1P23443 525 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 EIF4BP23588 611 aaKnown RBP11.15□□□□□ -0.62
ACTN1-208ENST00000553370 PBX3P40426 434 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 ALDH7A1P49419 539 aaKnown RBP11.15□□□□□ -0.62
ACTN1-208ENST00000553370 MRE11P49959 708 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 RBM10P98175 930 aaKnown RBP11.15□□□□□ -0.62
ACTN1-208ENST00000553370 RNASELQ05823 741 aaKnown RBP11.15□□□□□ -0.62
ACTN1-208ENST00000553370 SSRP1Q08945 709 aaKnown RBP11.15□□□□□ -0.62
ACTN1-208ENST00000553370 CBX2Q14781 532 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-208ENST00000553370 PKN1Q16512 942 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 TWF2Q6IBS0 349 aaKnown RBP11.15□□□□□ -0.62
ACTN1-208ENST00000553370 TRIM67Q6ZTA4 783 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 ECHDC2Q86YB7 292 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 HELQQ8TDG4 1101 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 CASP10Q92851 521 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 TMEM169Q96HH4 297 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 PHOX2BQ99453 314 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 RIT2Q99578 217 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 SLKQ9H2G2 1235 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-208ENST00000553370 CWH43Q9H720 699 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 NCOA5Q9HCD5 579 aaKnown RBP11.15□□□□□ -0.62
ACTN1-208ENST00000553370 NR2E1Q9Y466 385 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 SNX14Q9Y5W7 946 aa11.15□□□□□ -0.62
ACTN1-208ENST00000553370 NID2Q14112 1375 aa11.15□□□□□ -0.63
ACTN1-208ENST00000553370 PTPRZ1P23471 2315 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-208ENST00000553370 LOC730098B7Z3J9 87 aa11.14□□□□□ -0.63
ACTN1-208ENST00000553370 ZC3H11AO75152 810 aaKnown RBP eCLIP11.14□□□□□ -0.63
ACTN1-208ENST00000553370 DARSP14868 501 aaKnown RBP11.14□□□□□ -0.63
ACTN1-208ENST00000553370 ATF7P17544 494 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-208ENST00000553370 FGFR4P22455 802 aa11.14□□□□□ -0.63
ACTN1-208ENST00000553370 CIITAP33076 1130 aa11.14□□□□□ -0.63
ACTN1-208ENST00000553370 GPC3P51654 580 aa11.14□□□□□ -0.63
ACTN1-208ENST00000553370 PTPN5P54829 565 aa11.14□□□□□ -0.63
ACTN1-208ENST00000553370 ZXDAP98168 799 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms