RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 MIER3Q7Z3K6 550 aa10.56□□□□□ -0.72
CHD8-203ENST00000553283 SUGP1Q8IWZ8 645 aaKnown RBP10.56□□□□□ -0.72
CHD8-203ENST00000553283 TRIM22Q8IYM9 498 aa10.56□□□□□ -0.72
CHD8-203ENST00000553283 FBXL6Q8N531 539 aa10.56□□□□□ -0.72
CHD8-203ENST00000553283 CASP10Q92851 521 aa10.56□□□□□ -0.72
CHD8-203ENST00000553283 CEP89Q96ST8 783 aa10.56□□□□□ -0.72
CHD8-203ENST00000553283 PRRX2Q99811 253 aa10.56□□□□□ -0.72
CHD8-203ENST00000553283 TRAIPQ9BWF2 469 aa10.56□□□□□ -0.72
CHD8-203ENST00000553283 APOL5Q9BWW9 433 aa10.56□□□□□ -0.72
CHD8-203ENST00000553283 MRPL9Q9BYD2 267 aaKnown RBP10.56□□□□□ -0.72
CHD8-203ENST00000553283 PCDHA4Q9UN74 947 aa10.56□□□□□ -0.72
CHD8-203ENST00000553283 PLXNA4Q9HCM2 1894 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 A0A087WZ62 844 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 DDX11L8A8MPP1 907 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 CLASP2O75122 1294 aaKnown RBP10.55□□□□□ -0.72
CHD8-203ENST00000553283 REC8O95072 547 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 PHKA2P46019 1235 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 ALDH7A1P49419 539 aaKnown RBP10.55□□□□□ -0.72
CHD8-203ENST00000553283 DNM2P50570 870 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 BCAR1P56945 870 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 SSRP1Q08945 709 aaKnown RBP10.55□□□□□ -0.72
CHD8-203ENST00000553283 BMS1Q14692 1282 aaKnown RBP10.55□□□□□ -0.72
CHD8-203ENST00000553283 PTPN21Q16825 1174 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 MTERF2Q49AM1 385 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 TPRNQ4KMQ1 711 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 PRSS33Q8NF86 280 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 RSPH1Q8WYR4 309 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 ASIC4Q96FT7 647 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 MBOAT7Q96N66 472 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 FDXACB1Q9BRP7 624 aaPredicted RBP10.55□□□□□ -0.72
CHD8-203ENST00000553283 INO80BQ9C086 356 aaPredicted RBP10.55□□□□□ -0.72
CHD8-203ENST00000553283 ADAM7Q9H2U9 754 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 ZSWIM6Q9HCJ5 1215 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 SUCLA2Q9P2R7 463 aaPredicted RBP10.55□□□□□ -0.72
CHD8-203ENST00000553283 SEPT9Q9UHD8 586 aaPredicted RBP10.55□□□□□ -0.72
CHD8-203ENST00000553283 CACNA1HO95180 2353 aa10.55□□□□□ -0.72
CHD8-203ENST00000553283 MYH9P35579 1960 aaKnown RBP10.55□□□□□ -0.72
CHD8-203ENST00000553283 CARNS1A5YM72 827 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 TMEM150BA6NC51 233 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 NT5C1B-RDH14C9J2C7 533 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 M0R2N6 131 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 MAFO75444 373 aaPredicted RBP10.54□□□□□ -0.72
CHD8-203ENST00000553283 DEXIO95424 95 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 TDP2O95551 362 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 CXCL14O95715 111 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 SKIP12755 728 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 SFPQP23246 707 aaKnown RBP eCLIP10.54□□□□□ -0.72
CHD8-203ENST00000553283 PTPN5P54829 565 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 ITIH3Q06033 890 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 TOB2Q14106 344 aaPredicted RBP10.54□□□□□ -0.72
CHD8-203ENST00000553283 GALNT17Q6IS24 598 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 CES5AQ6NT32 575 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 MOXD1Q6UVY6 613 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 RUFY3Q7L099 469 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 ZNF410Q86VK4 478 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 BLIDQ8IZY5 108 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 FAM177A1Q8N128 213 aaPredicted RBP10.54□□□□□ -0.72
CHD8-203ENST00000553283 DAGLBQ8NCG7 672 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 ETNPPLQ8TBG4 499 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 ZNF274Q96GC6 653 aaPredicted RBP10.54□□□□□ -0.72
CHD8-203ENST00000553283 TMEM169Q96HH4 297 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 NECTIN4Q96NY8 510 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 SH2D3AQ9BRG2 576 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 HCFC2Q9Y5Z7 792 aa10.54□□□□□ -0.72
CHD8-203ENST00000553283 CPLX1O14810 134 aa10.53□□□□□ -0.72
CHD8-203ENST00000553283 EPB41L2O43491 1005 aaKnown RBP10.53□□□□□ -0.72
CHD8-203ENST00000553283 ZNF623O75123 536 aa10.53□□□□□ -0.72
CHD8-203ENST00000553283 AVPR2P30518 371 aa10.53□□□□□ -0.72
CHD8-203ENST00000553283 POLGP54098 1239 aaPredicted RBP10.53□□□□□ -0.72
CHD8-203ENST00000553283 PSMC5P62195 406 aa10.53□□□□□ -0.72
CHD8-203ENST00000553283 TCF15Q12870 199 aa10.53□□□□□ -0.72
CHD8-203ENST00000553283 NONOQ15233 471 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHD8-203ENST00000553283 NPY5RQ15761 445 aa10.53□□□□□ -0.72
CHD8-203ENST00000553283 TWF2Q6IBS0 349 aaKnown RBP10.53□□□□□ -0.72
CHD8-203ENST00000553283 GLB1LQ6UWU2 654 aa10.53□□□□□ -0.72
CHD8-203ENST00000553283 ANO5Q75V66 913 aa10.53□□□□□ -0.72
CHD8-203ENST00000553283 ZBTB33Q86T24 672 aa10.53□□□□□ -0.72
CHD8-203ENST00000553283 DDX53Q86TM3 631 aaKnown RBP10.53□□□□□ -0.72
CHD8-203ENST00000553283 RHPN2Q8IUC4 686 aa10.53□□□□□ -0.72
CHD8-203ENST00000553283 VPS52Q8N1B4 723 aa10.53□□□□□ -0.72
CHD8-203ENST00000553283 LPPQ93052 612 aa10.53□□□□□ -0.72
CHD8-203ENST00000553283 IGSF21Q96ID5 467 aa10.53□□□□□ -0.72
CHD8-203ENST00000553283 JPH2Q9BR39 696 aaPredicted RBP10.53□□□□□ -0.72
CHD8-203ENST00000553283 DDX25Q9UHL0 483 aaKnown RBP10.53□□□□□ -0.72
CHD8-203ENST00000553283 NR2E1Q9Y466 385 aa10.53□□□□□ -0.72
CHD8-203ENST00000553283 IRAK3Q9Y616 596 aa10.53□□□□□ -0.72
CHD8-203ENST00000553283 CYP46A1Q9Y6A2 500 aa10.53□□□□□ -0.72
CHD8-203ENST00000553283 EML1O00423 815 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 ZC3H11AO75152 810 aaKnown RBP eCLIP10.52□□□□□ -0.73
CHD8-203ENST00000553283 OFD1O75665 1012 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 GALTP07902 379 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 CTSAP10619 480 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 SP100P23497 879 aaPredicted RBP10.52□□□□□ -0.73
CHD8-203ENST00000553283 CA8P35219 290 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 MTHFRP42898 656 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 RAB27AP51159 221 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 GIT2Q14161 759 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 LONRF3Q496Y0 759 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 NOMO2Q5JPE7 1267 aa10.52□□□□□ -0.73
CHD8-203ENST00000553283 ATAT1Q5SQI0 421 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms