RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 EDRF1Q3B7T1 1238 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 HP1BP3Q5SSJ5 553 aaPredicted RBP12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 SEPT14Q6ZU15 432 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 SLF2Q8IX21 1173 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 PPM1KQ8N3J5 372 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 RNF25Q96BH1 459 aaPredicted RBP12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 KIF9Q9HAQ2 790 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 MYH7P12883 1935 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 FAM187AA6NFU0 413 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 FAM196BA6NMK8 535 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 ECEL1O95672 775 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 EEF2P13639 858 aaKnown RBP12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 ATP5DP30049 168 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 HOXA13P31271 388 aaPredicted RBP12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 GTF2IP78347 998 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 SLMAPQ14BN4 828 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 SPICE1Q8N0Z3 855 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 LRRC57Q8N9N7 239 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 HAS1Q92839 578 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 SAAL1Q96ER3 474 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 TGS1Q96RS0 853 aaKnown RBP12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 TAS2R14Q9NYV8 317 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 THRAP3Q9Y2W1 955 aaKnown RBP12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 GHRP10912 638 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 BCRP11274 1271 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 KRT15P19012 456 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 ZNF131P52739 623 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 PTENP60484 403 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 TMEM119Q4V9L6 283 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 ZCWPW2Q504Y3 356 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 STXBP4Q6ZWJ1 553 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 SLC51AQ86UW1 340 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 ARMC2Q8NEN0 867 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 ZNF622Q969S3 477 aaKnown RBP eCLIP12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 BTBD6Q96KE9 485 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 RUNDC3BQ96NL0 473 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 PAGR1Q9BTK6 254 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 DDX23Q9BUQ8 820 aaKnown RBP12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 PLVAPQ9BX97 442 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 BCAS3Q9H6U6 928 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 JMJD4Q9H9V9 463 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 TYW1Q9NV66 732 aaKnown RBP12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 TCEAL9Q9UHQ7 104 aa12.48□□□□□ -0.41
PPFIA2-227ENST00000552948 POC1B-GALNT4F8VUJ3 575 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 DLATP10515 647 aaKnown RBP12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 GBP1P32455 592 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 RPL21P46778 160 aaKnown RBP12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 SCNN1DP51172 638 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 GNPTABQ3T906 1256 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 SGO2Q562F6 1265 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 ODR4Q5SWX8 454 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 ZNF365Q70YC5 407 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 SPATA21Q7Z572 469 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 CATSPER3Q86XQ3 398 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 KRT35Q92764 455 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 PITPNM3Q9BZ71 974 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 MTFR1LQ9H019 292 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 PNMA3Q9UL41 463 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 C15orf41Q9Y2V0 281 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 BCL9LQ86UU0 1499 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 PSEN1P49768 467 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 BIRC2Q13490 618 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 TMED2Q15363 201 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 KYNUQ16719 465 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 C1orf131Q8NDD1 294 aaKnown RBP12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 CCHCR1Q8TD31 782 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 FAM118BQ9BPY3 351 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 USP40Q9NVE5 1235 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 TMEM59LQ9UK28 342 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 AJAP1Q9UKB5 411 aaPredicted RBP12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 COL1A1P02452 1464 aaPredicted RBP12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 SRRM3A6NNA2 597 aaPredicted RBP12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 PODXLO00592 558 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 HLA-DOAP06340 250 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 MARCKSL1P49006 195 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 DHX34Q14147 1143 aaKnown RBP12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 NFIXQ14938 502 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 COBLL1Q53SF7 1204 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 WLSQ5T9L3 541 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 ARHGAP27Q6ZUM4 889 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 SLFN12Q8IYM2 578 aa12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 SIPA1L3O60292 1781 aaPredicted RBP12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 COL5A2P05997 1499 aaPredicted RBP12.47□□□□□ -0.41
PPFIA2-227ENST00000552948 PPIP5K2O43314 1243 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 TTLL1O95922 423 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 SLURP2P0DP57 97 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 CHRNA3P32297 505 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 ALG3Q92685 438 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 CCDC127Q96BQ5 260 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 ZNF653Q96CK0 615 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 POP1Q99575 1024 aaKnown RBP12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 CARD9Q9H257 536 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 MTMR4Q9NYA4 1195 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 CTNNAL1Q9UBT7 734 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 ANKRD62A6NC57 917 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 MGRN1O60291 552 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 PPFIA2O75334 1257 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 KRT5P13647 590 aa12.46□□□□□ -0.41
PPFIA2-227ENST00000552948 ATP2A2P16615 1042 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms