RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 POLR3FQ9H1D9 316 aaPredicted RBP13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 TMX1Q9H3N1 280 aa13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 IFT122Q9HBG6 1241 aa13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 ZDHHC9Q9Y397 364 aa13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 ATP6V1DQ9Y5K8 247 aa13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 TDRD15B5MCY1 1934 aaKnown RBP13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 A0A087WWV3 80 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 GRXCR1A8MXD5 290 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 E9PMD0 336 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 GJB5O95377 273 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 PRR29P0C7W0 189 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 PLCG1P19174 1290 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 DDIT3P35638 169 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 TXLNAP40222 546 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 POU5F1BQ06416 359 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 NFX1Q12986 1120 aaKnown RBP13□□□□□ -0.33
TRAFD1-209ENST00000552896 CAPSQ13938 189 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 ZRSR1Q15695 479 aaKnown RBP13□□□□□ -0.33
TRAFD1-209ENST00000552896 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13□□□□□ -0.33
TRAFD1-209ENST00000552896 SRGAP1Q7Z6B7 1085 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 IFNLR1Q8IU57 520 aaPredicted RBP13□□□□□ -0.33
TRAFD1-209ENST00000552896 KSR1Q8IVT5 923 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 MYOCDQ8IZQ8 938 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 RNF149Q8NC42 400 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 RASSF8Q8NHQ8 419 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 KCNG4Q8TDN1 519 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 ASAP3Q8TDY4 903 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 SYMPKQ92797 1274 aaKnown RBP13□□□□□ -0.33
TRAFD1-209ENST00000552896 ZNF668Q96K58 619 aaPredicted RBP13□□□□□ -0.33
TRAFD1-209ENST00000552896 TIPINQ9BVW5 301 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 NFKBIZQ9BYH8 718 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 C1orf112Q9NSG2 853 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 KCND2Q9NZV8 630 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 MSRAQ9UJ68 235 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 CFAP45Q9UL16 551 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 ST3GAL5Q9UNP4 418 aa13□□□□□ -0.33
TRAFD1-209ENST00000552896 DENND3A2RUS2 1198 aa12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 RBAK-RBAKDNI3L0D1 243 aa12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 MGEA5O60502 916 aa12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 GLRA2P23416 452 aa12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 ANP32AP39687 249 aaKnown RBP12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 DNM1Q05193 864 aaKnown RBP12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 DSC3Q14574 896 aa12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 KARSQ15046 597 aaKnown RBP12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 PPP2R5AQ15172 486 aa12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 PCBP1Q15365 356 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 FAM102BQ5T8I3 360 aa12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 CDCA2Q69YH5 1023 aaPredicted RBP12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 KIFAP3Q92845 792 aa12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 TIFAQ96CG3 184 aa12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 CLIC6Q96NY7 704 aa12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 RUSC1Q9BVN2 902 aa12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 GPRC5CQ9NQ84 441 aa12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 RTN4Q9NQC3 1192 aaKnown RBP12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 TFIP11Q9UBB9 837 aaKnown RBP12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 STK17AQ9UEE5 414 aa12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 CITO14578 2027 aa12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 PDCD11Q14690 1871 aaKnown RBP12.99□□□□□ -0.33
TRAFD1-209ENST00000552896 TLL1O43897 1013 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 CUTAO60888 179 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 SRGAP2CP0DJJ0 459 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 GUCY2CP25092 1073 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 PBX2P40425 430 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 NAMPTP43490 491 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 SARSP49591 514 aaKnown RBP12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 RABGGTBP53611 331 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 SLC12A3P55017 1021 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 PTENP60484 403 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 KRT85P78386 507 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 NUCB2P80303 420 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 HTRA4P83105 476 aaPredicted RBP12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 FOXD4L6Q3SYB3 417 aaPredicted RBP12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 ZNF697Q5TEC3 545 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 RINT1Q6NUQ1 792 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 FOXD4L3Q6VB84 417 aaPredicted RBP12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 C1orf186Q6ZWK4 172 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 NPAS4Q8IUM7 802 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 SYT2Q8N9I0 419 aaPredicted RBP12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 LRRC15Q8TF66 581 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 TOP1MTQ969P6 601 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 EPSTI1Q96J88 318 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 DRC1Q96MC2 740 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 ADAM2Q99965 735 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 RC3H2Q9HBD1 1191 aaKnown RBP12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 RGS18Q9NS28 235 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 BLOC1S4Q9NUP1 217 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 AGPAT5Q9NUQ2 364 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 CCDC39Q9UFE4 941 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 YBX2Q9Y2T7 364 aaKnown RBP12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 TRIP11Q15643 1979 aa12.98□□□□□ -0.33
TRAFD1-209ENST00000552896 LRRIQ4A6NIV6 560 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 C9IYK1 514 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 ENPP3O14638 875 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 HIP1RO75146 1068 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 CSDE1O75534 798 aaKnown RBP12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 PLA2G4BP0C869 781 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 FGFR4P22455 802 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 MBTD1Q05BQ5 628 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 SPECC1Q5M775 1068 aa12.97□□□□□ -0.33
TRAFD1-209ENST00000552896 USP49Q70CQ1 688 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms