RNA–Protein interactions for RNA: ENST00000552310.5

RACGAP1-227, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 3

Gene RACGAP1, Length 932 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-227ENST00000552310 SNX27Q96L92 541 aa16.83■□□□□ 0.28
RACGAP1-227ENST00000552310 NECTIN4Q96NY8 510 aa16.83■□□□□ 0.28
RACGAP1-227ENST00000552310 SH2D3AQ9BRG2 576 aa16.83■□□□□ 0.28
RACGAP1-227ENST00000552310 IRF2BPLQ9H1B7 796 aa16.83■□□□□ 0.28
RACGAP1-227ENST00000552310 LIMD1Q9UGP4 676 aa16.83■□□□□ 0.28
RACGAP1-227ENST00000552310 CCDC196A0A1B0GTZ2 297 aa16.82■□□□□ 0.28
RACGAP1-227ENST00000552310 TMEM150BA6NC51 233 aa16.82■□□□□ 0.28
RACGAP1-227ENST00000552310 ZC3H11AO75152 810 aaKnown RBP eCLIP16.82■□□□□ 0.28
RACGAP1-227ENST00000552310 MTHFRP42898 656 aa16.82■□□□□ 0.28
RACGAP1-227ENST00000552310 RCAN1P53805 252 aa16.82■□□□□ 0.28
RACGAP1-227ENST00000552310 KRT32Q14532 448 aa16.82■□□□□ 0.28
RACGAP1-227ENST00000552310 MTERF2Q49AM1 385 aa16.82■□□□□ 0.28
RACGAP1-227ENST00000552310 TMEM173Q86WV6 379 aaPredicted RBP16.82■□□□□ 0.28
RACGAP1-227ENST00000552310 UBALD2Q8IYN6 164 aa16.82■□□□□ 0.28
RACGAP1-227ENST00000552310 TMEM105Q8N8V8 129 aa16.82■□□□□ 0.28
RACGAP1-227ENST00000552310 TMEM87AQ8NBN3 555 aa16.82■□□□□ 0.28
RACGAP1-227ENST00000552310 BRF1Q92994 677 aa16.82■□□□□ 0.28
RACGAP1-227ENST00000552310 TMEM169Q96HH4 297 aa16.82■□□□□ 0.28
RACGAP1-227ENST00000552310 GCOM2Q9BZD3 368 aaPredicted RBP16.82■□□□□ 0.28
RACGAP1-227ENST00000552310 UNC45AQ9H3U1 944 aa16.82■□□□□ 0.28
RACGAP1-227ENST00000552310 DACT1Q9NYF0 836 aa16.82■□□□□ 0.28
RACGAP1-227ENST00000552310 A0A087WZ62 844 aa16.81■□□□□ 0.28
RACGAP1-227ENST00000552310 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.81■□□□□ 0.28
RACGAP1-227ENST00000552310 GALR2O43603 387 aaPredicted RBP16.81■□□□□ 0.28
RACGAP1-227ENST00000552310 GAS7O60861 476 aa16.81■□□□□ 0.28
RACGAP1-227ENST00000552310 EPCAMP16422 314 aa16.81■□□□□ 0.28
RACGAP1-227ENST00000552310 AKAP17AQ02040 695 aaKnown RBP16.81■□□□□ 0.28
RACGAP1-227ENST00000552310 TARBP2Q15633 366 aaKnown RBP16.81■□□□□ 0.28
RACGAP1-227ENST00000552310 ZNF710Q8N1W2 664 aa16.81■□□□□ 0.28
RACGAP1-227ENST00000552310 FDXACB1Q9BRP7 624 aaPredicted RBP16.81■□□□□ 0.28
RACGAP1-227ENST00000552310 TEKT3Q9BXF9 490 aa16.81■□□□□ 0.28
RACGAP1-227ENST00000552310 MRPL9Q9BYD2 267 aaKnown RBP16.81■□□□□ 0.28
RACGAP1-227ENST00000552310 NRDE2Q9H7Z3 1164 aa16.81■□□□□ 0.28
RACGAP1-227ENST00000552310 VPS54Q9P1Q0 977 aa16.81■□□□□ 0.28
RACGAP1-227ENST00000552310 DBR1Q9UK59 544 aaKnown RBP16.81■□□□□ 0.28
RACGAP1-227ENST00000552310 CACNA1HO95180 2353 aa16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 ZFHX2Q9C0A1 2572 aaPredicted RBP16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 MEIS3P2A8K0S8 358 aa16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 HMGB1P09429 215 aaKnown RBP16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 PHKA2P46019 1235 aa16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 BMS1Q14692 1282 aaKnown RBP16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 BMP2KLQ5H9B9 411 aa16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 ATAT1Q5SQI0 421 aa16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 LRCH2Q5VUJ6 765 aa16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 TWF2Q6IBS0 349 aaKnown RBP16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 BICD2Q8TD16 824 aa16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 SLC22A17Q8WUG5 538 aa16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 BCL7CQ8WUZ0 217 aaPredicted RBP16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 SLC5A5Q92911 643 aa16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 RIT2Q99578 217 aa16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 SLC26A6Q9BXS9 759 aa16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 ZBP1Q9H171 429 aa16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 SEPT9Q9UHD8 586 aaPredicted RBP16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 INPP5FQ9Y2H2 1132 aa16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 PLXNA3P51805 1871 aa16.8■□□□□ 0.28
RACGAP1-227ENST00000552310 STBD1O95210 358 aa16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 GALTP07902 379 aa16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 CTSAP10619 480 aa16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 SFNP31947 248 aa16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 JAK3P52333 1124 aa16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 NTRK3Q16288 839 aa16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 TMC5Q6UXY8 1006 aa16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 ASCL5Q7RTU5 278 aa16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 KSR1Q8IVT5 923 aa16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 TDRD5Q8NAT2 981 aaKnown RBP16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 IGSF21Q96ID5 467 aa16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 JAKMIP1Q96N16 626 aaKnown RBP16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 CEP89Q96ST8 783 aa16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 NIFKQ9BYG3 293 aaKnown RBP16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 GBP3Q9H0R5 595 aa16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 CHST12Q9NRB3 414 aa16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 TBC1D13Q9NVG8 400 aa16.79■□□□□ 0.28
RACGAP1-227ENST00000552310 DDX11L8A8MPP1 907 aa16.78■□□□□ 0.28
RACGAP1-227ENST00000552310 USP11P51784 963 aa16.78■□□□□ 0.28
RACGAP1-227ENST00000552310 NUBP1P53384 320 aa16.78■□□□□ 0.28
RACGAP1-227ENST00000552310 CCT2P78371 535 aaKnown RBP16.78■□□□□ 0.28
RACGAP1-227ENST00000552310 NOMO2Q5JPE7 1267 aa16.78■□□□□ 0.28
RACGAP1-227ENST00000552310 KIAA1841Q6NSI8 718 aa16.78■□□□□ 0.28
RACGAP1-227ENST00000552310 MIER3Q7Z3K6 550 aa16.78■□□□□ 0.28
RACGAP1-227ENST00000552310 DDX53Q86TM3 631 aaKnown RBP16.78■□□□□ 0.28
RACGAP1-227ENST00000552310 RHPN2Q8IUC4 686 aa16.78■□□□□ 0.28
RACGAP1-227ENST00000552310 ZDHHC14Q8IZN3 488 aa16.78■□□□□ 0.28
RACGAP1-227ENST00000552310 MFSD1Q9H3U5 465 aa16.78■□□□□ 0.28
RACGAP1-227ENST00000552310 DZANK1Q9NVP4 752 aa16.78■□□□□ 0.28
RACGAP1-227ENST00000552310 SUCLA2Q9P2R7 463 aaPredicted RBP16.78■□□□□ 0.28
RACGAP1-227ENST00000552310 DNAJB4Q9UDY4 337 aa16.78■□□□□ 0.28
RACGAP1-227ENST00000552310 PIN4Q9Y237 131 aaKnown RBP16.78■□□□□ 0.28
RACGAP1-227ENST00000552310 IGKV6-21A0A0C4DH24 114 aa16.77■□□□□ 0.28
RACGAP1-227ENST00000552310 B4GALT3O60512 393 aa16.77■□□□□ 0.28
RACGAP1-227ENST00000552310 OFD1O75665 1012 aa16.77■□□□□ 0.28
RACGAP1-227ENST00000552310 PSMD10O75832 226 aa16.77■□□□□ 0.28
RACGAP1-227ENST00000552310 SSBP05455 408 aaKnown RBP eCLIP16.77■□□□□ 0.28
RACGAP1-227ENST00000552310 SLC11A1P49279 550 aa16.77■□□□□ 0.28
RACGAP1-227ENST00000552310 NLRP5P59047 1200 aa16.77■□□□□ 0.28
RACGAP1-227ENST00000552310 RNASELQ05823 741 aaKnown RBP16.77■□□□□ 0.28
RACGAP1-227ENST00000552310 XKR3Q5GH77 459 aa16.77■□□□□ 0.28
RACGAP1-227ENST00000552310 ASTLQ6HA08 431 aaPredicted RBP16.77■□□□□ 0.28
RACGAP1-227ENST00000552310 BLOC1S2Q6QNY1 142 aa16.77■□□□□ 0.28
RACGAP1-227ENST00000552310 GLB1LQ6UWU2 654 aa16.77■□□□□ 0.28
RACGAP1-227ENST00000552310 CATSPER4Q7RTX7 472 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms