RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 ST3GAL5Q9UNP4 418 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 NOC2LQ9Y3T9 749 aaKnown RBP11.81□□□□□ -0.52
PTCH1-225ENST00000551845 MORC2Q9Y6X9 1032 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-225ENST00000551845 A0A087WZ62 844 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 E9PMD0 336 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 USO1O60763 962 aaKnown RBP11.8□□□□□ -0.52
PTCH1-225ENST00000551845 PPP6R2O75170 966 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 YEATS4O95619 227 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 EYA4O95677 639 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 SRGAP2CP0DJJ0 459 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 DARSP14868 501 aaKnown RBP11.8□□□□□ -0.52
PTCH1-225ENST00000551845 ZSCAN20P17040 1043 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-225ENST00000551845 CYP11B2P19099 503 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 TXLNAP40222 546 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 NUCB2P80303 420 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 LAMTOR4Q0VGL1 99 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 TFDP1Q14186 410 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 AAK1Q2M2I8 961 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 HYIQ5T013 277 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 MAEAQ7L5Y9 396 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 ZNF668Q96K58 619 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-225ENST00000551845 SLC9A7Q96T83 725 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 PLIN2Q99541 437 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 FDXACB1Q9BRP7 624 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-225ENST00000551845 LRFN3Q9BTN0 628 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 ZBED2Q9BTP6 218 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 CCSER1Q9C0I3 900 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 CSRNP2Q9H175 543 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 SLC28A3Q9HAS3 691 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 FBXO2Q9UK22 296 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-225ENST00000551845 COL4A3BPQ9Y5P4 624 aa11.8□□□□□ -0.52
PTCH1-225ENST00000551845 DOCK5Q9H7D0 1870 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 BMP1P13497 986 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 DDIT3P35638 169 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 ARL2P36404 184 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 ANP32AP39687 249 aaKnown RBP11.79□□□□□ -0.52
PTCH1-225ENST00000551845 WDR5P61964 334 aaKnown RBP11.79□□□□□ -0.52
PTCH1-225ENST00000551845 GRIN1Q05586 938 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 POU5F1BQ06416 359 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 GRB10Q13322 594 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 TCTN1Q2MV58 587 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 FAM102BQ5T8I3 360 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.79□□□□□ -0.52
PTCH1-225ENST00000551845 SRGAP1Q7Z6B7 1085 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 KSR1Q8IVT5 923 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 RNF149Q8NC42 400 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 KCNG4Q8TDN1 519 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 TMEM40Q8WWA1 233 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 NLRP4Q96MN2 994 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 CLIC6Q96NY7 704 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 PNMA5Q96PV4 448 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 XPNPEP1Q9NQW7 623 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 KCNG1Q9UIX4 513 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 ZDHHC9Q9Y397 364 aa11.79□□□□□ -0.52
PTCH1-225ENST00000551845 SSBP05455 408 aaKnown RBP eCLIP11.78□□□□□ -0.52
PTCH1-225ENST00000551845 SFPQP23246 707 aaKnown RBP eCLIP11.78□□□□□ -0.52
PTCH1-225ENST00000551845 TFF2Q03403 129 aa11.78□□□□□ -0.52
PTCH1-225ENST00000551845 DNM1Q05193 864 aaKnown RBP11.78□□□□□ -0.52
PTCH1-225ENST00000551845 NCBP1Q09161 790 aaKnown RBP11.78□□□□□ -0.52
PTCH1-225ENST00000551845 SPECC1Q5M775 1068 aa11.78□□□□□ -0.52
PTCH1-225ENST00000551845 RTN4RL1Q86UN2 441 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-225ENST00000551845 FAM228AQ86W67 206 aa11.78□□□□□ -0.52
PTCH1-225ENST00000551845 HERC6Q8IVU3 1022 aa11.78□□□□□ -0.52
PTCH1-225ENST00000551845 MYOCDQ8IZQ8 938 aa11.78□□□□□ -0.52
PTCH1-225ENST00000551845 SYT2Q8N9I0 419 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-225ENST00000551845 TOP1MTQ969P6 601 aa11.78□□□□□ -0.52
PTCH1-225ENST00000551845 EPSTI1Q96J88 318 aa11.78□□□□□ -0.52
PTCH1-225ENST00000551845 EPHX3Q9H6B9 360 aa11.78□□□□□ -0.52
PTCH1-225ENST00000551845 ERVK-5Q9HDB9 667 aa11.78□□□□□ -0.52
PTCH1-225ENST00000551845 CHST12Q9NRB3 414 aa11.78□□□□□ -0.52
PTCH1-225ENST00000551845 RCOR1Q9UKL0 485 aa11.78□□□□□ -0.52
PTCH1-225ENST00000551845 ARIH1Q9Y4X5 557 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-225ENST00000551845 GBF1Q92538 1859 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-225ENST00000551845 DENND3A2RUS2 1198 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 CUTAO60888 179 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 CSDE1O75534 798 aaKnown RBP11.77□□□□□ -0.53
PTCH1-225ENST00000551845 UPP2O95045 317 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 PLA2G4BP0C869 781 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 STAG3L1P0CL83 205 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 NCLP19338 710 aaKnown RBP11.77□□□□□ -0.53
PTCH1-225ENST00000551845 GLRA2P23416 452 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 PHKA2P46019 1235 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 ME1P48163 572 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 KCNQ1P51787 676 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 PTENP60484 403 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 KRT85P78386 507 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 KARSQ15046 597 aaKnown RBP11.77□□□□□ -0.53
PTCH1-225ENST00000551845 PCBP1Q15365 356 aaKnown RBP eCLIP11.77□□□□□ -0.53
PTCH1-225ENST00000551845 TMEM119Q4V9L6 283 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 TMEM31Q5JXX7 168 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 RRAGBQ5VZM2 374 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 RINT1Q6NUQ1 792 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 SLC24A5Q71RS6 500 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 CATSPER4Q7RTX7 472 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 KIFAP3Q92845 792 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 IFT74Q96LB3 600 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 RAD9AQ99638 391 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 ADAM2Q99965 735 aa11.77□□□□□ -0.53
PTCH1-225ENST00000551845 TIPINQ9BVW5 301 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms