RNA–Protein interactions for RNA: ENST00000551710.1

CNOT2-233, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-233	ENST00000551710	GAREM2	Q75VX8	874 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	DDX53	Q86TM3	631 aa	Known RBP	4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	CALML6	Q8TD86	181 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	GCDH	Q92947	438 aa	Predicted RBP	4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	RIOX1	Q9H6W3	641 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	ZNHIT2	Q9UHR6	403 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	ASB1	Q9Y576	335 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	CD2AP	Q9Y5K6	639 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	RBM8A	Q9Y5S9	174 aa	Known RBP	4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	KPNA6	O60684	536 aa		4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	H2AFY	O75367	372 aa	Known RBP	4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	MAF	O75444	373 aa	Predicted RBP	4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	MRPS21	P82921	87 aa	Known RBP	4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	COL10A1	Q03692	680 aa		4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	HNRNPA0	Q13151	305 aa	Known RBP	4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	NFE2L2	Q16236	605 aa		4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	TKFC	Q3LXA3	575 aa		4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	PRAMEF9	Q5VWM5	478 aa		4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	FAM111B	Q6SJ93	734 aa		4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	OTOP1	Q7RTM1	612 aa		4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	VRK3	Q8IV63	474 aa		4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	KIAA1958	Q8N8K9	716 aa		4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	ANKRD53	Q8N9V6	530 aa		4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	PGBD4	Q96DM1	585 aa		4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	NAF1	Q96HR8	494 aa	Known RBP	4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	PCIF1	Q9H4Z3	704 aa		4.8	□□□□□ -1.64
CNOT2-233	ENST00000551710	XDH	P47989	1333 aa		4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	UBE2QL1	A1L167	161 aa		4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	LCHN	A4D1U4	455 aa		4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	ZNF891	A8MT65	544 aa	Predicted RBP	4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	RHOBTB3	O94955	611 aa		4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	PRL	P01236	227 aa		4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	APEX1	P27695	318 aa	Known RBP	4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	ADCY7	P51828	1080 aa		4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	BPIFB4	P59827	614 aa		4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	TOB2	Q14106	344 aa	Predicted RBP	4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	ESRP1	Q6NXG1	681 aa	Known RBP	4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	KLHDC10	Q6PID8	442 aa		4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	MRGPRE	Q86SM8	312 aa		4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	SYNE4	Q8N205	404 aa		4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	NXPE1	Q8N323	547 aa		4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	OR5AN1	Q8NGI8	311 aa		4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	SLC6A15	Q9H2J7	730 aa		4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	MS4A5	Q9H3V2	200 aa		4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	PTGFRN	Q9P2B2	879 aa		4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	VWA7	Q9Y334	891 aa		4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.79	□□□□□ -1.64
CNOT2-233	ENST00000551710	CCDC163	A0A0D9SF12	145 aa		4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	APOL3	O95236	402 aa		4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	ASL	P04424	464 aa		4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	SESN2	P58004	480 aa	Predicted RBP	4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	SMAD3	P84022	425 aa	Known RBP	4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	PTPA	Q15257	358 aa		4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	CREB3L3	Q68CJ9	461 aa		4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	SLFN12L	Q6IEE8	588 aa		4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	ZNF276	Q8N554	614 aa		4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	LPP	Q93052	612 aa		4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	GFM2	Q969S9	779 aa	Known RBP	4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	RNPC3	Q96LT9	517 aa	Known RBP	4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	ELF4	Q99607	663 aa	Predicted RBP	4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	TCF25	Q9BQ70	676 aa		4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	CABP5	Q9NP86	173 aa		4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	SAE1	Q9UBE0	346 aa	Predicted RBP	4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	DNAI1	Q9UI46	699 aa		4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	RCAN3	Q9UKA8	241 aa		4.78	□□□□□ -1.64
CNOT2-233	ENST00000551710	UBA6	A0AVT1	1052 aa	Predicted RBP	4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	FAM83G	A6ND36	823 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710		H7C1D1	291 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	CBX4	O00257	560 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	NPTXR	O95502	500 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	ADRA1B	P35368	520 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	RANGAP1	P46060	587 aa	Predicted RBP	4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	ATXN1	P54253	815 aa	Known RBP	4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	MYBPC3	Q14896	1274 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	CFAP100	Q494V2	611 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	FNDC3B	Q53EP0	1204 aa	Known RBP	4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	RABL3	Q5HYI8	236 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	KRT40	Q6A162	431 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	UNQ6494/PRO21346	Q6UXR6	183 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	MB21D1	Q8N884	522 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	PROKR1	Q8TCW9	393 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	RTF1	Q92541	710 aa	Known RBP	4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	TUBGCP5	Q96RT8	1024 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	GPHA2	Q96T91	129 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	FOXB1	Q99853	325 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	POFUT1	Q9H488	388 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	TMEM260	Q9NX78	707 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	NCDN	Q9UBB6	729 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	PACSIN3	Q9UKS6	424 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	DENND2A	Q9ULE3	1009 aa		4.77	□□□□□ -1.65
CNOT2-233	ENST00000551710	C2orf78	A6NCI8	922 aa		4.76	□□□□□ -1.65
CNOT2-233	ENST00000551710	GOLGA6L6	A8MZA4	724 aa		4.76	□□□□□ -1.65
CNOT2-233	ENST00000551710	MASP2	O00187	686 aa		4.76	□□□□□ -1.65

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