RNA–Protein interactions for RNA: ENST00000551483.5

CNOT2-231, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2 BASIC

Gene CNOT2, Length 4,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-231	ENST00000551483	SLC8A3	P57103	927 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	GPR85	P60893	370 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	VBP1	P61758	197 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	KRT85	P78386	507 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	PLCB3	Q01970	1234 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	DOC2A	Q14183	400 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	SPARCL1	Q14515	664 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	CEP55	Q53EZ4	464 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	USP39	Q53GS9	565 aa	Known RBP	4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	FAM26D	Q5JW98	314 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	USPL1	Q5W0Q7	1092 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	TTBK2	Q6IQ55	1244 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	CCDC62	Q6P9F0	684 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	CCDC81	Q6ZN84	652 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	NLRC3	Q7RTR2	1065 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	SYT2	Q8N9I0	419 aa	Predicted RBP	4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	ZNF565	Q8N9K5	539 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	IL17RE	Q8NFR9	667 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	DNAJB8	Q8NHS0	232 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	LTV1	Q96GA3	475 aa	Predicted RBP	4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	ABHD8	Q96I13	439 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	GORASP1	Q9BQQ3	440 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	TNKS2	Q9H2K2	1166 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	SMARCAD1	Q9H4L7	1026 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	ATAD3A	Q9NVI7	634 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	CPSF3	Q9UKF6	684 aa	Known RBP	4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	TRIM43B	A6NCK2	446 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	OR6C65	A6NJZ3	312 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483		E9PMD0	336 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	TNFRSF21	O75509	655 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	PIAS2	O75928	621 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	FBXO21	O94952	628 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	CNOT4	O95628	575 aa	Known RBP	4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	EOMES	O95936	686 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	CCND1	P24385	295 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	HADHB	P55084	474 aa	Known RBP	4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	KCNH2	Q12809	1159 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	COASY	Q13057	564 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	ANO4	Q32M45	955 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	SPATA24	Q86W54	205 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	SLC22A9	Q8IVM8	553 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	ST13P4	Q8IZP2	240 aa	Predicted RBP	4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	EXOC6	Q8TAG9	804 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	SMARCE1	Q969G3	411 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	OPTN	Q96CV9	577 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	UBXN10	Q96LJ8	280 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	OXCT2	Q9BYC2	517 aa	Predicted RBP	4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	CARD9	Q9H257	536 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	RTEL1	Q9NZ71	1219 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	BAG5	Q9UL15	447 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	L1RE1	Q9UN81	338 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	COG5	Q9UP83	839 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	PARP3	Q9Y6F1	533 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	MYO3B	Q8WXR4	1341 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	MAGEB16	A2A368	324 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	SH3D21	A4FU49	640 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	RGSL1	A5PLK6	1076 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	MASP2	O00187	686 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	ZBTB24	O43167	697 aa	Predicted RBP	4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	KLHL2	O95198	593 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	POU2F1	P14859	743 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	ATP5J	P18859	108 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	S100A1	P23297	94 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	TRIM23	P36406	574 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	PCP4	P48539	62 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	CAMK2B	Q13554	666 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	THEMIS2	Q5TEJ8	643 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	ANKMY2	Q8IV38	441 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	CD302	Q8IX05	232 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	ZNF321P	Q8N8H1	164 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	EXT2	Q93063	718 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	PRPF18	Q99633	342 aa	Known RBP	4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	PARVB	Q9HBI1	364 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	CCDC87	Q9NVE4	849 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	MIS18A	Q9NYP9	233 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	DPP7	Q9UHL4	492 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	ZBTB1	Q9Y2K1	713 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	TTC21B	Q7Z4L5	1316 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	KDM2B	Q8NHM5	1336 aa		4.19	□□□□□ -1.74
CNOT2-231	ENST00000551483	MACROD2	A1Z1Q3	448 aa		4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	FAM221A	A4D161	298 aa		4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	TRDMT1	O14717	391 aa	Known RBP	4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	IFIT3	O14879	490 aa	Known RBP	4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	KLF4	O43474	513 aa		4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	CTNND1	O60716	968 aa	Known RBP	4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	CBFA2T3	O75081	653 aa		4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	GUCY1B2	O75343	617 aa		4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	TMCC1	O94876	653 aa		4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	SNRPA1	P09661	255 aa	Known RBP	4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	CDK4	P11802	303 aa		4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	ADSL	P30566	484 aa	Predicted RBP	4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	CCT6A	P40227	531 aa	Known RBP	4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	IREB2	P48200	963 aa	Known RBP	4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	CLCN6	P51797	869 aa		4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	AK2	P54819	239 aa		4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	EIF4A1	P60842	406 aa	Known RBP	4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	EIF4G2	P78344	907 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	MFSD10	Q14728	455 aa		4.18	□□□□□ -1.74
CNOT2-231	ENST00000551483	ERCC6L	Q2NKX8	1250 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms