RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 KCNJ6P48051 423 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 AMPD3Q01432 767 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 SPIRE1Q08AE8 756 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 SKIV2LQ15477 1246 aaKnown RBP8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 ZNF658Q5TYW1 1059 aaPredicted RBP8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 RUFY4Q6ZNE9 571 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 CYFIP1Q7L576 1253 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 ZSCAN30Q86W11 494 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 SMYD4Q8IYR2 804 aaPredicted RBP8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 SAMD3Q8N6K7 520 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 SPC24Q8NBT2 197 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 LARP4BQ92615 738 aaKnown RBP8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 RAD54LQ92698 747 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 ZBTB10Q96DT7 871 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 MED15Q96RN5 788 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 RAD9AQ99638 391 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 C7orf25Q9BPX7 421 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 TRIM9Q9C026 710 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 TUT1Q9H6E5 874 aaKnown RBP8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 RC3H2Q9HBD1 1191 aaKnown RBP8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 SETD4Q9NVD3 440 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 MAP3K20Q9NYL2 800 aaKnown RBP8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 KMT2EQ8IZD2 1858 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 MUC6Q6W4X9 2439 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 GSTTP1A0A1W2PQM5 241 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 RSPH10B2B2RC85 870 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 RHOBTB3O94955 611 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 TPM3P06753 285 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 RSPH10BP0C881 870 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 ATP1A3P13637 1013 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 ZNF18P17022 549 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 THPOP40225 353 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 ASIC1P78348 528 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 FANCCQ00597 558 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 SETQ01105 290 aaPredicted RBP8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 MGAT3Q09327 533 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 MCM6Q14566 821 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 ECM1Q16610 540 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 KMT5BQ4FZB7 885 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 CEP55Q53EZ4 464 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 CNNM4Q6P4Q7 775 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 SV2BQ7L1I2 683 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 KCNK18Q7Z418 384 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 DRC7Q8IY82 874 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 CYP2W1Q8TAV3 490 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 LMBR1Q8WVP7 490 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 LINC01599Q8WXQ3 324 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 SLC5A5Q92911 643 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 ATP6V0A1Q93050 837 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 CCDC47Q96A33 483 aaKnown RBP8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 UIMC1Q96RL1 719 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 TGS1Q96RS0 853 aaKnown RBP8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 PCYT2Q99447 389 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 LRFN3Q9BTN0 628 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 KATNAL1Q9BW62 490 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 NT5C3AQ9H0P0 336 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 UBE2ZQ9H832 354 aaPredicted RBP8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 FANCLQ9NW38 375 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 IFNKQ9P0W0 207 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 VAV3Q9UKW4 847 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 COG5Q9UP83 839 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 ZKSCAN5Q9Y2L8 839 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 NFE2L3Q9Y4A8 694 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 STK24Q9Y6E0 443 aa8.2□□□□□ -1.1
SMARCD1-210ENST00000551352 POTEB3A0JP26 581 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 C17orf102A2RUQ5 167 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 FAM86C2PA6NEL3 165 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 MYMKA6NI61 221 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 MEIS1O00470 390 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 MED24O75448 989 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 PARNO95453 639 aaKnown RBP8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 CHRNA1P02708 482 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 TGFB3P10600 412 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 IL9P15248 144 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 KCNA2P16389 499 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 IKBKEQ14164 716 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 DHX8Q14562 1220 aaKnown RBP8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 COL19A1Q14993 1142 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 FAM26DQ5JW98 314 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 MARCH8Q5T0T0 291 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 UTP14CQ5TAP6 766 aaKnown RBP8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 SPATA1Q5VX52 437 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 HAUS3Q68CZ6 603 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 NCAPH2Q6IBW4 605 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 KLHL10Q6JEL2 608 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 POTEBQ6S5H4 581 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 METTL7BQ6UX53 244 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 NIPA1Q7RTP0 329 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 MYOCDQ8IZQ8 938 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 GIMAP8Q8ND71 665 aaPredicted RBP8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 ERMNQ8TAM6 284 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 HLA-CQ95604 372 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 TOP1MTQ969P6 601 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 MXRA8Q9BRK3 442 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 ZBED2Q9BTP6 218 aa8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 GTPBP4Q9BZE4 634 aaKnown RBP8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 XPO4Q9C0E2 1151 aaKnown RBP8.19□□□□□ -1.1
SMARCD1-210ENST00000551352 LRRC27Q9C0I9 530 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms