RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 JMJD4Q9H9V9 463 aa13□□□□□ -0.33
GPN3-208ENST00000550974 WDFY3Q8IZQ1 3526 aa13□□□□□ -0.33
GPN3-208ENST00000550974 CEP295Q9C0D2 2601 aa12.99□□□□□ -0.33
GPN3-208ENST00000550974 CHURC1-FNTBB4DL54 471 aa12.99□□□□□ -0.33
GPN3-208ENST00000550974 GCOM1H8Y6P7 765 aaPredicted RBP12.99□□□□□ -0.33
GPN3-208ENST00000550974 POLR2MP0CAP2 368 aa12.99□□□□□ -0.33
GPN3-208ENST00000550974 FNTBP49356 437 aa12.99□□□□□ -0.33
GPN3-208ENST00000550974 ADCY1Q08828 1119 aa12.99□□□□□ -0.33
GPN3-208ENST00000550974 ZNF852Q6ZMS4 543 aa12.99□□□□□ -0.33
GPN3-208ENST00000550974 ECHDC2Q86YB7 292 aa12.99□□□□□ -0.33
GPN3-208ENST00000550974 FTSJ3Q8IY81 847 aaKnown RBP12.99□□□□□ -0.33
GPN3-208ENST00000550974 GIMAP8Q8ND71 665 aaPredicted RBP12.99□□□□□ -0.33
GPN3-208ENST00000550974 RHOBTB2Q9BYZ6 727 aa12.99□□□□□ -0.33
GPN3-208ENST00000550974 ANAPC4Q9UJX5 808 aa12.99□□□□□ -0.33
GPN3-208ENST00000550974 MRPS17Q9Y2R5 130 aaKnown RBP12.99□□□□□ -0.33
GPN3-208ENST00000550974 RAB11FIP3O75154 756 aa12.98□□□□□ -0.33
GPN3-208ENST00000550974 FGRP09769 529 aa12.98□□□□□ -0.33
GPN3-208ENST00000550974 ZNF806P0C7X5 589 aa12.98□□□□□ -0.33
GPN3-208ENST00000550974 COL28A1Q2UY09 1125 aa12.98□□□□□ -0.33
GPN3-208ENST00000550974 ELMSAN1Q6PJG2 1045 aa12.98□□□□□ -0.33
GPN3-208ENST00000550974 MTHFD1LQ6UB35 978 aa12.98□□□□□ -0.33
GPN3-208ENST00000550974 CEP68Q76N32 757 aa12.98□□□□□ -0.33
GPN3-208ENST00000550974 SAMD3Q8N6K7 520 aa12.98□□□□□ -0.33
GPN3-208ENST00000550974 TNPO1Q92973 898 aaKnown RBP12.98□□□□□ -0.33
GPN3-208ENST00000550974 ZNF707Q96C28 371 aaPredicted RBP12.98□□□□□ -0.33
GPN3-208ENST00000550974 OSMRQ99650 979 aa12.98□□□□□ -0.33
GPN3-208ENST00000550974 MRPL9Q9BYD2 267 aaKnown RBP12.98□□□□□ -0.33
GPN3-208ENST00000550974 NDRG2Q9UN36 371 aaKnown RBP12.98□□□□□ -0.33
GPN3-208ENST00000550974 GPSM3Q9Y4H4 160 aa12.98□□□□□ -0.33
GPN3-208ENST00000550974 IGF2RP11717 2491 aa12.98□□□□□ -0.33
GPN3-208ENST00000550974 CNOT1A5YKK6 2376 aaKnown RBP12.98□□□□□ -0.33
GPN3-208ENST00000550974 ADAMTS20P59510 1910 aa12.98□□□□□ -0.33
GPN3-208ENST00000550974 C2CD2LO14523 706 aa12.97□□□□□ -0.33
GPN3-208ENST00000550974 FOXP2O15409 715 aa12.97□□□□□ -0.33
GPN3-208ENST00000550974 ANP32CO43423 234 aa12.97□□□□□ -0.33
GPN3-208ENST00000550974 PPP1R11O60927 126 aaPredicted RBP12.97□□□□□ -0.33
GPN3-208ENST00000550974 ATP9AO75110 1047 aa12.97□□□□□ -0.33
GPN3-208ENST00000550974 SPATA31D3P0C874 917 aa12.97□□□□□ -0.33
GPN3-208ENST00000550974 ZSCAN20P17040 1043 aaPredicted RBP12.97□□□□□ -0.33
GPN3-208ENST00000550974 CNR2P34972 360 aa12.97□□□□□ -0.33
GPN3-208ENST00000550974 CCR3P51677 355 aa12.97□□□□□ -0.33
GPN3-208ENST00000550974 KIZQ2M2Z5 673 aa12.97□□□□□ -0.33
GPN3-208ENST00000550974 RNF43Q68DV7 783 aa12.97□□□□□ -0.33
GPN3-208ENST00000550974 KIAA1211LQ6NV74 962 aa12.97□□□□□ -0.33
GPN3-208ENST00000550974 SPATA31D4Q6ZUB0 917 aa12.97□□□□□ -0.33
GPN3-208ENST00000550974 ZKSCAN3Q9BRR0 538 aa12.97□□□□□ -0.33
GPN3-208ENST00000550974 VN1R3Q9BXE9 311 aa12.97□□□□□ -0.33
GPN3-208ENST00000550974 MRPL17Q9NRX2 175 aaKnown RBP12.97□□□□□ -0.33
GPN3-208ENST00000550974 DPP7Q9UHL4 492 aa12.97□□□□□ -0.33
GPN3-208ENST00000550974 MAST4O15021 2626 aa12.97□□□□□ -0.33
GPN3-208ENST00000550974 SMG1Q96Q15 3661 aaKnown RBP12.97□□□□□ -0.33
GPN3-208ENST00000550974 RALGAPA1Q6GYQ0 2036 aa12.96□□□□□ -0.33
GPN3-208ENST00000550974 TRIM6-TRIM34B2RNG4 842 aa12.96□□□□□ -0.33
GPN3-208ENST00000550974 GALTP07902 379 aa12.96□□□□□ -0.33
GPN3-208ENST00000550974 FSHRP23945 695 aa12.96□□□□□ -0.33
GPN3-208ENST00000550974 KLRC1P26715 233 aa12.96□□□□□ -0.33
GPN3-208ENST00000550974 CRYBB1P53674 252 aaPredicted RBP12.96□□□□□ -0.33
GPN3-208ENST00000550974 SATB1Q01826 763 aa12.96□□□□□ -0.33
GPN3-208ENST00000550974 ASPRV1Q53RT3 343 aa12.96□□□□□ -0.33
GPN3-208ENST00000550974 HEATR6Q6AI08 1181 aaKnown RBP12.96□□□□□ -0.33
GPN3-208ENST00000550974 NLRX1Q86UT6 975 aa12.96□□□□□ -0.33
GPN3-208ENST00000550974 PNMA1Q8ND90 353 aa12.96□□□□□ -0.33
GPN3-208ENST00000550974 NT5C3AQ9H0P0 336 aa12.96□□□□□ -0.33
GPN3-208ENST00000550974 CHRDQ9H2X0 955 aa12.96□□□□□ -0.33
GPN3-208ENST00000550974 SMOC1Q9H4F8 434 aa12.96□□□□□ -0.33
GPN3-208ENST00000550974 AZI2Q9H6S1 392 aa12.96□□□□□ -0.33
GPN3-208ENST00000550974 ECHDC1Q9NTX5 307 aa12.96□□□□□ -0.33
GPN3-208ENST00000550974 PKD2L1Q9P0L9 805 aa12.96□□□□□ -0.33
GPN3-208ENST00000550974 ZFP37Q9Y6Q3 630 aaPredicted RBP12.96□□□□□ -0.33
GPN3-208ENST00000550974 LILRB3O75022 631 aa12.95□□□□□ -0.34
GPN3-208ENST00000550974 SEC24BO95487 1268 aa12.95□□□□□ -0.34
GPN3-208ENST00000550974 GLUD1P00367 558 aa12.95□□□□□ -0.34
GPN3-208ENST00000550974 CXCL12P48061 93 aa12.95□□□□□ -0.34
GPN3-208ENST00000550974 AK2P54819 239 aa12.95□□□□□ -0.34
GPN3-208ENST00000550974 SH3PXD2AQ5TCZ1 1133 aa12.95□□□□□ -0.34
GPN3-208ENST00000550974 MTSS1LQ765P7 747 aa12.95□□□□□ -0.34
GPN3-208ENST00000550974 KIAA0319LQ8IZA0 1049 aa12.95□□□□□ -0.34
GPN3-208ENST00000550974 MIER1Q8N108 512 aa12.95□□□□□ -0.34
GPN3-208ENST00000550974 GLIS3Q8NEA6 775 aa12.95□□□□□ -0.34
GPN3-208ENST00000550974 PCYT2Q99447 389 aa12.95□□□□□ -0.34
GPN3-208ENST00000550974 KXD1Q9BQD3 176 aa12.95□□□□□ -0.34
GPN3-208ENST00000550974 GBP3Q9H0R5 595 aa12.95□□□□□ -0.34
GPN3-208ENST00000550974 NRDE2Q9H7Z3 1164 aa12.95□□□□□ -0.34
GPN3-208ENST00000550974 HEBP1Q9NRV9 189 aa12.95□□□□□ -0.34
GPN3-208ENST00000550974 CDH7Q9ULB5 785 aa12.95□□□□□ -0.34
GPN3-208ENST00000550974 MYH15Q9Y2K3 1946 aa12.94□□□□□ -0.34
GPN3-208ENST00000550974 NBEAQ8NFP9 2946 aa12.94□□□□□ -0.34
GPN3-208ENST00000550974 DOCK8Q8NF50 2099 aa12.94□□□□□ -0.34
GPN3-208ENST00000550974 HYAL3O43820 417 aaPredicted RBP12.94□□□□□ -0.34
GPN3-208ENST00000550974 ADH1AP07327 375 aa12.94□□□□□ -0.34
GPN3-208ENST00000550974 PARP1P09874 1014 aaKnown RBP12.94□□□□□ -0.34
GPN3-208ENST00000550974 RLBP1P12271 317 aa12.94□□□□□ -0.34
GPN3-208ENST00000550974 KCNA2P16389 499 aa12.94□□□□□ -0.34
GPN3-208ENST00000550974 C19orf57Q0VDD7 668 aa12.94□□□□□ -0.34
GPN3-208ENST00000550974 VPS53Q5VIR6 699 aa12.94□□□□□ -0.34
GPN3-208ENST00000550974 TSHZ3Q63HK5 1081 aa12.94□□□□□ -0.34
GPN3-208ENST00000550974 MAMSTRQ6ZN01 415 aa12.94□□□□□ -0.34
GPN3-208ENST00000550974 LONP2Q86WA8 852 aa12.94□□□□□ -0.34
GPN3-208ENST00000550974 PROSER1Q86XN7 944 aa12.94□□□□□ -0.34
GPN3-208ENST00000550974 PHF20Q9BVI0 1012 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms