RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 FAM227BQ96M60 508 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 KRTAP9-3Q9BYQ3 159 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 NACAP1Q9BZK3 213 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 RNF32Q9H0A6 362 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 PUS7LQ9H0K6 701 aaKnown RBP6.82□□□□□ -1.32
SCAF11-213ENST00000550629 DCP1AQ9NPI6 582 aaPredicted RBP6.82□□□□□ -1.32
SCAF11-213ENST00000550629 USP40Q9NVE5 1235 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 AATFQ9NY61 560 aaKnown RBP eCLIP6.82□□□□□ -1.32
SCAF11-213ENST00000550629 PPP2R3BQ9Y5P8 575 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 SSU72P8A0A1W2PR75 194 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 NPIPB6E9PJ23 425 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 M0R2C6 588 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 SHOXO15266 292 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 FKTNO75072 461 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 WDHD1O75717 1129 aaPredicted RBP6.81□□□□□ -1.32
SCAF11-213ENST00000550629 CTSKP43235 329 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 GJA8P48165 433 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 ALX1Q15699 326 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 TBC1D10BQ4KMP7 808 aaPredicted RBP6.81□□□□□ -1.32
SCAF11-213ENST00000550629 ZPBP2Q6X784 338 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 SPPL2CQ8IUH8 684 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 CCDC144CPQ8IYA2 1237 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 TEX11Q8IYF3 940 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 C7orf61Q8IZ16 206 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 LCORLQ8N3X6 602 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 ANKS4BQ8N8V4 417 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 SH3RF3Q8TEJ3 882 aaPredicted RBP6.81□□□□□ -1.32
SCAF11-213ENST00000550629 HOOK2Q96ED9 719 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 DSCC1Q9BVC3 393 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 DHX36Q9H2U1 1008 aaKnown RBP6.81□□□□□ -1.32
SCAF11-213ENST00000550629 ACBD3Q9H3P7 528 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 ARMT1Q9H993 441 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 KCNK12Q9HB15 430 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 ZNF70Q9UC06 446 aaPredicted RBP6.81□□□□□ -1.32
SCAF11-213ENST00000550629 CTNNA3Q9UI47 895 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 ZMYM5Q9UJ78 669 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 MYH7P12883 1935 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 ATRNL1Q5VV63 1379 aa6.81□□□□□ -1.32
SCAF11-213ENST00000550629 AK9Q5TCS8 1911 aa6.8□□□□□ -1.32
SCAF11-213ENST00000550629 SHTN1A0MZ66 631 aa6.8□□□□□ -1.32
SCAF11-213ENST00000550629 TCAF2A6NFQ2 919 aa6.8□□□□□ -1.32
SCAF11-213ENST00000550629 GSG1L2A8MUP6 293 aa6.8□□□□□ -1.32
SCAF11-213ENST00000550629 CHGBP05060 677 aa6.8□□□□□ -1.32
SCAF11-213ENST00000550629 NT5C2P49902 561 aa6.8□□□□□ -1.32
SCAF11-213ENST00000550629 DYNLL1P63167 89 aaKnown RBP6.8□□□□□ -1.32
SCAF11-213ENST00000550629 CHRNEQ04844 493 aa6.8□□□□□ -1.32
SCAF11-213ENST00000550629 AXDND1Q5T1B0 1012 aaPredicted RBP6.8□□□□□ -1.32
SCAF11-213ENST00000550629 DCAF15Q66K64 600 aa6.8□□□□□ -1.32
SCAF11-213ENST00000550629 ZNF589Q86UQ0 364 aaPredicted RBP6.8□□□□□ -1.32
SCAF11-213ENST00000550629 LDHDQ86WU2 507 aa6.8□□□□□ -1.32
SCAF11-213ENST00000550629 AMOTL1Q8IY63 956 aa6.8□□□□□ -1.32
SCAF11-213ENST00000550629 FAM151AQ8WW52 585 aa6.8□□□□□ -1.32
SCAF11-213ENST00000550629 DCPSQ96C86 337 aaKnown RBP6.8□□□□□ -1.32
SCAF11-213ENST00000550629 SEC62Q99442 399 aaKnown RBP6.8□□□□□ -1.32
SCAF11-213ENST00000550629 TGIF2Q9GZN2 237 aa6.8□□□□□ -1.32
SCAF11-213ENST00000550629 TDRD3Q9H7E2 651 aaKnown RBP6.8□□□□□ -1.32
SCAF11-213ENST00000550629 FAM86C1Q9NVL1 165 aa6.8□□□□□ -1.32
SCAF11-213ENST00000550629 ARPP21Q9UBL0 812 aaPredicted RBP6.8□□□□□ -1.32
SCAF11-213ENST00000550629 SLC4A4Q9Y6R1 1079 aa6.8□□□□□ -1.32
SCAF11-213ENST00000550629 CNTNAP1P78357 1384 aa6.8□□□□□ -1.32
SCAF11-213ENST00000550629 ADAMTSL1Q8N6G6 1762 aa6.8□□□□□ -1.32
SCAF11-213ENST00000550629 FLT1P17948 1338 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 NOTOA8MTQ0 251 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 FOXP2O15409 715 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 PSPNO60542 156 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 USP2O75604 605 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-213ENST00000550629 TP53P04637 393 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-213ENST00000550629 APPP05067 770 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 HSPD1P10809 573 aaKnown RBP6.79□□□□□ -1.32
SCAF11-213ENST00000550629 PCP11498 1178 aaKnown RBP6.79□□□□□ -1.32
SCAF11-213ENST00000550629 YY1P25490 414 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 GIPRP48546 466 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 SBK1Q52WX2 424 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 MAP4K1Q92918 833 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 MAP6Q96JE9 813 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 SRRTQ9BXP5 876 aaKnown RBP6.79□□□□□ -1.32
SCAF11-213ENST00000550629 OSBPL5Q9H0X9 879 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-213ENST00000550629 DEFB129Q9H1M3 183 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 NMRK2Q9NPI5 230 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 GGA3Q9NZ52 723 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 PRR13Q9NZ81 148 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 GPR160Q9UJ42 338 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 ZNF214Q9UL59 606 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-213ENST00000550629 PCDHAC2Q9Y5I4 1007 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 MYH2Q9UKX2 1941 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 ROBO3Q96MS0 1386 aa6.79□□□□□ -1.32
SCAF11-213ENST00000550629 MYO5AQ9Y4I1 1855 aaKnown RBP6.79□□□□□ -1.32
SCAF11-213ENST00000550629 ECM29Q5VYK3 1845 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 CLRN2A0PK11 232 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 PRKAB2O43741 272 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 EFEMP2O95967 443 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 FGAP02671 866 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 KRT1P04264 644 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 HLA-DOAP06340 250 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 SLC3A2P08195 630 aaKnown RBP6.78□□□□□ -1.32
SCAF11-213ENST00000550629 TDO2P48775 406 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 NASPP49321 788 aaPredicted RBP6.78□□□□□ -1.32
SCAF11-213ENST00000550629 GALK1P51570 392 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 RASA3Q14644 834 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 KCNA10Q16322 511 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms