RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 TMEM62Q0P6H9 643 aa11.36□□□□□ -0.59
RAB5C-207ENST00000550504 LAMTOR4Q0VGL1 99 aa11.36□□□□□ -0.59
RAB5C-207ENST00000550504 PSMD2Q13200 908 aa11.36□□□□□ -0.59
RAB5C-207ENST00000550504 PTGISQ16647 500 aa11.36□□□□□ -0.59
RAB5C-207ENST00000550504 L1TD1Q5T7N2 865 aaKnown RBP11.36□□□□□ -0.59
RAB5C-207ENST00000550504 ZNF658Q5TYW1 1059 aaPredicted RBP11.36□□□□□ -0.59
RAB5C-207ENST00000550504 KIAA0319LQ8IZA0 1049 aa11.36□□□□□ -0.59
RAB5C-207ENST00000550504 KIAA0895Q8NCT3 520 aa11.36□□□□□ -0.59
RAB5C-207ENST00000550504 DNAJB3Q8WWF6 145 aa11.36□□□□□ -0.59
RAB5C-207ENST00000550504 MAP7D2Q96T17 732 aa11.36□□□□□ -0.59
RAB5C-207ENST00000550504 FUCA2Q9BTY2 467 aa11.36□□□□□ -0.59
RAB5C-207ENST00000550504 TRPV6Q9H1D0 765 aa11.36□□□□□ -0.59
RAB5C-207ENST00000550504 KMT5AQ9NQR1 393 aa11.36□□□□□ -0.59
RAB5C-207ENST00000550504 NOD1Q9Y239 953 aa11.36□□□□□ -0.59
RAB5C-207ENST00000550504 BRCA2P51587 3418 aa11.36□□□□□ -0.59
RAB5C-207ENST00000550504 ARVCFO00192 962 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 B4GALT4O60513 344 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 CD44P16070 742 aaKnown RBP11.35□□□□□ -0.59
RAB5C-207ENST00000550504 NAMPTP43490 491 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 SMTNP53814 917 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 ZNF445P59923 1031 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 CAPSQ13938 189 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 MXD4Q14582 209 aaPredicted RBP11.35□□□□□ -0.59
RAB5C-207ENST00000550504 PPP2R5AQ15172 486 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 ANO6Q4KMQ2 910 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 ZC2HC1CQ53FD0 456 aaPredicted RBP11.35□□□□□ -0.59
RAB5C-207ENST00000550504 PRPF38BQ5VTL8 546 aaKnown RBP11.35□□□□□ -0.59
RAB5C-207ENST00000550504 KLHL10Q6JEL2 608 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 LRSAM1Q6UWE0 723 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 C11orf57Q6ZUT1 292 aaPredicted RBP11.35□□□□□ -0.59
RAB5C-207ENST00000550504 ANKLE1Q8NAG6 615 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 SLC43A3Q8NBI5 491 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 RNF149Q8NC42 400 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 DEPTORQ8TB45 409 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 WNT8BQ93098 351 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 PAWRQ96IZ0 340 aaKnown RBP11.35□□□□□ -0.59
RAB5C-207ENST00000550504 SCLT1Q96NL6 688 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 FIZ1Q96SL8 496 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 DNAJC25Q9H1X3 360 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 C11orf49Q9H6J7 331 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 C17orf75Q9HAS0 396 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 OLFML3Q9NRN5 406 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 ANO10Q9NW15 660 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 GINS2Q9Y248 185 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 ADGRA3Q8IWK6 1321 aa11.35□□□□□ -0.59
RAB5C-207ENST00000550504 A0A087WZ62 844 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 PPP1R3GB7ZBB8 358 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 ASAP2O43150 1006 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 PQBP1O60828 265 aaKnown RBP11.34□□□□□ -0.59
RAB5C-207ENST00000550504 PRPF6O94906 941 aaKnown RBP11.34□□□□□ -0.59
RAB5C-207ENST00000550504 EN2P19622 333 aaPredicted RBP11.34□□□□□ -0.59
RAB5C-207ENST00000550504 PRCPP42785 496 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 CDK7P50613 346 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 NCKAP1LP55160 1127 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 NLRP11P59045 1033 aaKnown RBP11.34□□□□□ -0.59
RAB5C-207ENST00000550504 TFDP1Q14186 410 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 KIZQ2M2Z5 673 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 TAF2Q6P1X5 1199 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 SLC39A5Q6ZMH5 540 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 ZNF720Q7Z2F6 126 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 HAUS6Q7Z4H7 955 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 SERINC5Q86VE9 423 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 NELFCDQ8IXH7 590 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 SPIRE2Q8WWL2 714 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 NLRP7Q8WX94 980 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 CTAGE1Q96RT6 745 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 FDXACB1Q9BRP7 624 aaPredicted RBP11.34□□□□□ -0.59
RAB5C-207ENST00000550504 GTPBP4Q9BZE4 634 aaKnown RBP11.34□□□□□ -0.59
RAB5C-207ENST00000550504 TSPY26PQ9H489 355 aa11.34□□□□□ -0.59
RAB5C-207ENST00000550504 CENPFP49454 3210 aa11.33□□□□□ -0.59
RAB5C-207ENST00000550504 DENND3A2RUS2 1198 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 RBAK-RBAKDNI3L0D1 243 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 CTSHP09668 335 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 MAPTP10636 758 aaKnown RBP11.33□□□□□ -0.6
RAB5C-207ENST00000550504 COL6A1P12109 1028 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 GPC3P51654 580 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 KCNA1Q09470 495 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 PTK7Q13308 1070 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 STIM1Q13586 685 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 STXBP4Q6ZWJ1 553 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 EPM2AIP1Q7L775 607 aaPredicted RBP11.33□□□□□ -0.6
RAB5C-207ENST00000550504 RSPH3Q86UC2 560 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 MYOCDQ8IZQ8 938 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 ADSSL1Q8N142 457 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 MLKLQ8NB16 471 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 TMEM161BQ8NDZ6 487 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 SCFD1Q8WVM8 642 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 DHX38Q92620 1227 aaKnown RBP11.33□□□□□ -0.6
RAB5C-207ENST00000550504 NTPCRQ9BSD7 190 aaKnown RBP11.33□□□□□ -0.6
RAB5C-207ENST00000550504 IKZF4Q9H2S9 585 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 CDHR5Q9HBB8 845 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 DACH1Q9UI36 760 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 KCNG1Q9UIX4 513 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 CTNND2Q9UQB3 1225 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 PCDHB13Q9Y5F0 798 aa11.33□□□□□ -0.6
RAB5C-207ENST00000550504 H0YCG3 227 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 INO80B-WBP1J3KQ70 363 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 M0QZ92 97 aa11.32□□□□□ -0.6
RAB5C-207ENST00000550504 EIF3DO15371 548 aaKnown RBP eCLIP11.32□□□□□ -0.6
RAB5C-207ENST00000550504 TLR3O15455 904 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms