RNA–Protein interactions for RNA: ENST00000550236.1

ATXN2-220, Transcript of ataxin 2, humanhuman

TSL 5

Gene ATXN2, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-220ENST00000550236 REV3LO60673 3130 aa9.32□□□□□ -0.92
ATXN2-220ENST00000550236 IGKV6-21A0A0C4DH24 114 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 H3BQV1 296 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 USO1O60763 962 aaKnown RBP9.31□□□□□ -0.92
ATXN2-220ENST00000550236 OR52Z1P0C646 297 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 LINC00271P0C7V0 271 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 SPATA31C1P0DKV0 1188 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 POU3F3P20264 500 aaPredicted RBP9.31□□□□□ -0.92
ATXN2-220ENST00000550236 DNAJB1P25685 340 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 CDC25AP30304 524 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 GTF2F1P35269 517 aaKnown RBP eCLIP9.31□□□□□ -0.92
ATXN2-220ENST00000550236 PBX3P40426 434 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 MRPS5P82675 430 aaKnown RBP9.31□□□□□ -0.92
ATXN2-220ENST00000550236 LAMTOR4Q0VGL1 99 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 EMC2Q15006 297 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 ZRSR1Q15695 479 aaKnown RBP9.31□□□□□ -0.92
ATXN2-220ENST00000550236 TCEAL5Q5H9L2 206 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 TWF2Q6IBS0 349 aaKnown RBP9.31□□□□□ -0.92
ATXN2-220ENST00000550236 POTEGQ6S5H5 508 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 CATSPER4Q7RTX7 472 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 CATSPER3Q86XQ3 398 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 ECHDC2Q86YB7 292 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 CMTR2Q8IYT2 770 aaKnown RBP9.31□□□□□ -0.92
ATXN2-220ENST00000550236 CRIPAKQ8N1N5 446 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 KLHL23Q8NBE8 558 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 SAMD11Q96NU1 681 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 ASB2Q96Q27 587 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 MTRQ99707 1265 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 HSD17B14Q9BPX1 270 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 MINDY3Q9H8M7 445 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 RC3H2Q9HBD1 1191 aaKnown RBP9.31□□□□□ -0.92
ATXN2-220ENST00000550236 GPRC5CQ9NQ84 441 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 C1orf112Q9NSG2 853 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 TYW1Q9NV66 732 aaKnown RBP9.31□□□□□ -0.92
ATXN2-220ENST00000550236 NOL7Q9UMY1 257 aaKnown RBP9.31□□□□□ -0.92
ATXN2-220ENST00000550236 PIN4Q9Y237 131 aaKnown RBP9.31□□□□□ -0.92
ATXN2-220ENST00000550236 COL4A3BPQ9Y5P4 624 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 UNC80Q8N2C7 3258 aa9.31□□□□□ -0.92
ATXN2-220ENST00000550236 MYH11P35749 1972 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 MEIS3P2A8K0S8 358 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 PP2D1A8MPX8 630 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 NT5C1B-RDH14C9J2C7 533 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 ITGB1P05556 798 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 LIG1P18858 919 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 IRS1P35568 1242 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 CCT6AP40227 531 aaKnown RBP9.3□□□□□ -0.92
ATXN2-220ENST00000550236 RFC5P40937 340 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 PTGDRQ13258 359 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 CLUL1Q15846 466 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 ECM1Q16610 540 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 LRRC55Q6ZSA7 311 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 RBM23Q86U06 439 aaKnown RBP9.3□□□□□ -0.92
ATXN2-220ENST00000550236 CDR2LQ86X02 465 aaPredicted RBP9.3□□□□□ -0.92
ATXN2-220ENST00000550236 ABI1Q8IZP0 508 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 C4orf32Q8N8J7 132 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 RNF149Q8NC42 400 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 IL27Q8NEV9 243 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 HELQQ8TDG4 1101 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 ASAP3Q8TDY4 903 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 PSPC1Q8WXF1 523 aaKnown RBP9.3□□□□□ -0.92
ATXN2-220ENST00000550236 HLA-CQ95604 372 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 MRPL38Q96DV4 380 aaKnown RBP9.3□□□□□ -0.92
ATXN2-220ENST00000550236 CPB2Q96IY4 423 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 PLIN2Q99541 437 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 BACH2Q9BYV9 841 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 DHX33Q9H6R0 707 aaKnown RBP9.3□□□□□ -0.92
ATXN2-220ENST00000550236 IFT122Q9HBG6 1241 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 XPNPEP1Q9NQW7 623 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 RNF19AQ9NV58 838 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 TMEM161AQ9NX61 479 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 PLAGL2Q9UPG8 496 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 INPP5FQ9Y2H2 1132 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 USP20Q9Y2K6 914 aa9.3□□□□□ -0.92
ATXN2-220ENST00000550236 TDRD15B5MCY1 1934 aaKnown RBP9.29□□□□□ -0.92
ATXN2-220ENST00000550236 H3BQ06 376 aaPredicted RBP9.29□□□□□ -0.92
ATXN2-220ENST00000550236 INO80B-WBP1J3KQ70 363 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 LINC01565O15544 149 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 KCNA5P22460 613 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 U2AF2P26368 475 aaKnown RBP eCLIP9.29□□□□□ -0.922e-6■□□□□ 9.7
ATXN2-220ENST00000550236 RARRES1P49788 294 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 FAM189BP81408 668 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 IL17AQ16552 155 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 PTPROQ16827 1216 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 TJAP1Q5JTD0 557 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 CLLU1OSQ5K130 101 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 LARP1BQ659C4 914 aaKnown RBP9.29□□□□□ -0.92
ATXN2-220ENST00000550236 FERMT3Q86UX7 667 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 THNSL1Q8IYQ7 743 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 COLGALT1Q8NBJ5 622 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 MICAL1Q8TDZ2 1067 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 POF1BQ8WVV4 589 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 ATXN2LQ8WWM7 1075 aaKnown RBP9.29□□□□□ -0.92
ATXN2-220ENST00000550236 TCP11Q8WWU5 503 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 CLP1Q92989 425 aaKnown RBP9.29□□□□□ -0.92
ATXN2-220ENST00000550236 CASD1Q96PB1 797 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 JPH2Q9BR39 696 aaPredicted RBP9.29□□□□□ -0.92
ATXN2-220ENST00000550236 C11orf84Q9BUA3 381 aaPredicted RBP9.29□□□□□ -0.92
ATXN2-220ENST00000550236 APOL6Q9BWW8 343 aa9.29□□□□□ -0.92
ATXN2-220ENST00000550236 INO80BQ9C086 356 aaPredicted RBP9.29□□□□□ -0.92
ATXN2-220ENST00000550236 GBP3Q9H0R5 595 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms