RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 FERMT3Q86UX7 667 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 MRPL38Q96DV4 380 aaKnown RBP13.17□□□□□ -0.3
LETMD1-221ENST00000550100 SCLT1Q96NL6 688 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 CWH43Q9H720 699 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 GPRC5CQ9NQ84 441 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.17□□□□□ -0.3
LETMD1-221ENST00000550100 ANKEF1Q9NU02 776 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 TYW1Q9NV66 732 aaKnown RBP13.17□□□□□ -0.3
LETMD1-221ENST00000550100 TMEM161AQ9NX61 479 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 LMCD1Q9NZU5 365 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 LRFN2Q9ULH4 789 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 PLAGL2Q9UPG8 496 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 DKC1O60832 514 aaKnown RBP eCLIP13.16□□□□□ -0.3
LETMD1-221ENST00000550100 CSPG5O95196 566 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 ITGB1P05556 798 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 CDC25AP30304 524 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 ARL2P36404 184 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 TRAPPC10P48553 1259 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 KCNQ1P51787 676 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 GNL2Q13823 731 aaKnown RBP13.16□□□□□ -0.3
LETMD1-221ENST00000550100 SKIV2LQ15477 1246 aaKnown RBP13.16□□□□□ -0.3
LETMD1-221ENST00000550100 MCTP1Q6DN14 999 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 ZNF410Q86VK4 478 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 ZNF710Q8N1W2 664 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 KLHL23Q8NBE8 558 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 SPPL3Q8TCT6 385 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 SLC7A3Q8WY07 619 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 LPPQ93052 612 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 SAMD11Q96NU1 681 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 ASB2Q96Q27 587 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 POLR3CQ9BUI4 534 aaPredicted RBP13.16□□□□□ -0.3
LETMD1-221ENST00000550100 ELAC1Q9H777 363 aaKnown RBP13.16□□□□□ -0.3
LETMD1-221ENST00000550100 PCDHGC5Q9Y5F6 944 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 C5orf42Q9H799 3197 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 A0A0U1RQF3 1178 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 GLRA2P23416 452 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 GTF2F1P35269 517 aaKnown RBP eCLIP13.16□□□□□ -0.3
LETMD1-221ENST00000550100 IRS1P35568 1242 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 MCM2P49736 904 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
LETMD1-221ENST00000550100 TCEAL5Q5H9L2 206 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 ODR4Q5SWX8 454 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 UBXN11Q5T124 520 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 MAEAQ7L5Y9 396 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 RNF149Q8NC42 400 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 RNF169Q8NCN4 708 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 NEK9Q8TD19 979 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 PSPC1Q8WXF1 523 aaKnown RBP13.16□□□□□ -0.3
LETMD1-221ENST00000550100 MTRQ99707 1265 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 MMTAG2Q9BU76 263 aaKnown RBP13.16□□□□□ -0.3
LETMD1-221ENST00000550100 ATP6V0A4Q9HBG4 840 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 TUFT1Q9NNX1 390 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 THEGQ9P2T0 379 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 SMC3Q9UQE7 1217 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 PPME1Q9Y570 386 aa13.16□□□□□ -0.3
LETMD1-221ENST00000550100 BDP1A6H8Y1 2624 aa13.15□□□□□ -0.3
LETMD1-221ENST00000550100 PLXNA4Q9HCM2 1894 aa13.15□□□□□ -0.3
LETMD1-221ENST00000550100 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.15□□□□□ -0.3
LETMD1-221ENST00000550100 USO1O60763 962 aaKnown RBP13.15□□□□□ -0.3
LETMD1-221ENST00000550100 RB1P06400 928 aa13.15□□□□□ -0.3
LETMD1-221ENST00000550100 XRCC6P12956 609 aaKnown RBP eCLIP13.15□□□□□ -0.3
LETMD1-221ENST00000550100 BMP1P13497 986 aa13.15□□□□□ -0.3
LETMD1-221ENST00000550100 ZSCAN20P17040 1043 aaPredicted RBP13.15□□□□□ -0.3
LETMD1-221ENST00000550100 RPA1P27694 616 aa13.15□□□□□ -0.3
LETMD1-221ENST00000550100 PBX3P40426 434 aa13.15□□□□□ -0.3
LETMD1-221ENST00000550100 PHKA2P46019 1235 aa13.15□□□□□ -0.3
LETMD1-221ENST00000550100 AFF1P51825 1210 aaKnown RBP13.15□□□□□ -0.3
LETMD1-221ENST00000550100 CDC42EP1Q00587 391 aa13.15□□□□□ -0.3
LETMD1-221ENST00000550100 ORC2Q13416 577 aaPredicted RBP13.15□□□□□ -0.3
LETMD1-221ENST00000550100 CAPSQ13938 189 aa13.15□□□□□ -0.3
LETMD1-221ENST00000550100 CATSPER4Q7RTX7 472 aa13.15□□□□□ -0.3
LETMD1-221ENST00000550100 IGSF22Q8N9C0 903 aa13.15□□□□□ -0.3
LETMD1-221ENST00000550100 ATXN2LQ8WWM7 1075 aaKnown RBP13.15□□□□□ -0.3
LETMD1-221ENST00000550100 BSNDQ8WZ55 320 aa13.15□□□□□ -0.3
LETMD1-221ENST00000550100 NECAB3Q96P71 396 aaPredicted RBP13.15□□□□□ -0.3
LETMD1-221ENST00000550100 JPH2Q9BR39 696 aaPredicted RBP13.15□□□□□ -0.3
LETMD1-221ENST00000550100 TTLL13PA6NNM8 815 aa13.14□□□□□ -0.31
LETMD1-221ENST00000550100 B4GALT3O60512 393 aa13.14□□□□□ -0.31
LETMD1-221ENST00000550100 PTENP60484 403 aa13.14□□□□□ -0.31
LETMD1-221ENST00000550100 MRPS5P82675 430 aaKnown RBP13.14□□□□□ -0.31
LETMD1-221ENST00000550100 AMHR2Q16671 573 aa13.14□□□□□ -0.31
LETMD1-221ENST00000550100 LARP1BQ659C4 914 aaKnown RBP13.14□□□□□ -0.31
LETMD1-221ENST00000550100 KCNK18Q7Z418 384 aa13.14□□□□□ -0.31
LETMD1-221ENST00000550100 COLGALT1Q8NBJ5 622 aa13.14□□□□□ -0.31
LETMD1-221ENST00000550100 HELQQ8TDG4 1101 aa13.14□□□□□ -0.31
LETMD1-221ENST00000550100 TRAIPQ9BWF2 469 aa13.14□□□□□ -0.31
LETMD1-221ENST00000550100 POLR3FQ9H1D9 316 aaPredicted RBP13.14□□□□□ -0.31
LETMD1-221ENST00000550100 CHST12Q9NRB3 414 aa13.14□□□□□ -0.31
LETMD1-221ENST00000550100 AGPAT5Q9NUQ2 364 aa13.14□□□□□ -0.31
LETMD1-221ENST00000550100 DBR1Q9UK59 544 aaKnown RBP13.14□□□□□ -0.31
LETMD1-221ENST00000550100 NOL7Q9UMY1 257 aaKnown RBP13.14□□□□□ -0.31
LETMD1-221ENST00000550100 PIN4Q9Y237 131 aaKnown RBP13.14□□□□□ -0.31
LETMD1-221ENST00000550100 USP20Q9Y2K6 914 aa13.14□□□□□ -0.31
LETMD1-221ENST00000550100 B4GALT5O43286 388 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 DGAT1O75907 488 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 MBTD1Q05BQ5 628 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 PDIA5Q14554 519 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 TJAP1Q5JTD0 557 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 SRGAP1Q7Z6B7 1085 aa13.13□□□□□ -0.31
LETMD1-221ENST00000550100 ADGRD2Q7Z7M1 963 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms