RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 RNF149Q8NC42 400 aa21.48■■□□□ 1.03
DDX54-207ENST00000550016 ASAP3Q8TDY4 903 aa21.48■■□□□ 1.03
DDX54-207ENST00000550016 TMX1Q9H3N1 280 aa21.48■■□□□ 1.03
DDX54-207ENST00000550016 GPRC5CQ9NQ84 441 aa21.48■■□□□ 1.03
DDX54-207ENST00000550016 CSDE1O75534 798 aaKnown RBP21.47■■□□□ 1.03
DDX54-207ENST00000550016 SSBP05455 408 aaKnown RBP eCLIP21.47■■□□□ 1.03
DDX54-207ENST00000550016 NCLP19338 710 aaKnown RBP21.47■■□□□ 1.03
DDX54-207ENST00000550016 GLRA2P23416 452 aa21.47■■□□□ 1.03
DDX54-207ENST00000550016 PHKA2P46019 1235 aa21.47■■□□□ 1.03
DDX54-207ENST00000550016 FXR1P51114 621 aaKnown RBP eCLIP21.47■■□□□ 1.03
DDX54-207ENST00000550016 KRT85P78386 507 aa21.47■■□□□ 1.03
DDX54-207ENST00000550016 C1orf186Q6ZWK4 172 aa21.47■■□□□ 1.03
DDX54-207ENST00000550016 SRGAP1Q7Z6B7 1085 aa21.47■■□□□ 1.03
DDX54-207ENST00000550016 RTN4RL1Q86UN2 441 aaPredicted RBP21.47■■□□□ 1.03
DDX54-207ENST00000550016 HERC6Q8IVU3 1022 aa21.47■■□□□ 1.03
DDX54-207ENST00000550016 SFPQP23246 707 aaKnown RBP eCLIP21.46■■□□□ 1.03
DDX54-207ENST00000550016 ME1P48163 572 aa21.46■■□□□ 1.03
DDX54-207ENST00000550016 SLC12A3P55017 1021 aa21.46■■□□□ 1.03
DDX54-207ENST00000550016 CAPSQ13938 189 aa21.46■■□□□ 1.03
DDX54-207ENST00000550016 RRAGBQ5VZM2 374 aa21.46■■□□□ 1.03
DDX54-207ENST00000550016 KIFAP3Q92845 792 aa21.46■■□□□ 1.03
DDX54-207ENST00000550016 LRCH3Q96II8 777 aa21.46■■□□□ 1.03
DDX54-207ENST00000550016 RUSC1Q9BVN2 902 aa21.46■■□□□ 1.03
DDX54-207ENST00000550016 TSPYL2Q9H2G4 693 aaPredicted RBP21.46■■□□□ 1.03
DDX54-207ENST00000550016 BLOC1S4Q9NUP1 217 aa21.46■■□□□ 1.03
DDX54-207ENST00000550016 FGFR4P22455 802 aa21.45■■□□□ 1.02
DDX54-207ENST00000550016 PTENP60484 403 aa21.45■■□□□ 1.02
DDX54-207ENST00000550016 DSC3Q14574 896 aa21.45■■□□□ 1.02
DDX54-207ENST00000550016 RAB30Q15771 203 aa21.45■■□□□ 1.02
DDX54-207ENST00000550016 AXDND1Q5T1B0 1012 aaPredicted RBP21.45■■□□□ 1.02
DDX54-207ENST00000550016 IFNLR1Q8IU57 520 aaPredicted RBP21.45■■□□□ 1.02
DDX54-207ENST00000550016 MYOCDQ8IZQ8 938 aa21.45■■□□□ 1.02
DDX54-207ENST00000550016 LRRC15Q8TF66 581 aa21.45■■□□□ 1.02
DDX54-207ENST00000550016 LEO1Q8WVC0 666 aaPredicted RBP21.45■■□□□ 1.02
DDX54-207ENST00000550016 LINC01599Q8WXQ3 324 aa21.45■■□□□ 1.02
DDX54-207ENST00000550016 RAD54LQ92698 747 aa21.45■■□□□ 1.02
DDX54-207ENST00000550016 TOP1MTQ969P6 601 aa21.45■■□□□ 1.02
DDX54-207ENST00000550016 SPATA32Q96LK8 384 aa21.45■■□□□ 1.02
DDX54-207ENST00000550016 ADAM2Q99965 735 aa21.45■■□□□ 1.02
DDX54-207ENST00000550016 TIPINQ9BVW5 301 aa21.45■■□□□ 1.02
DDX54-207ENST00000550016 KCND2Q9NZV8 630 aa21.45■■□□□ 1.02
DDX54-207ENST00000550016 MSRAQ9UJ68 235 aa21.45■■□□□ 1.02
DDX54-207ENST00000550016 PCDHA7Q9UN72 937 aa21.45■■□□□ 1.02
DDX54-207ENST00000550016 PCDHA11Q9Y5I1 949 aa21.45■■□□□ 1.02
DDX54-207ENST00000550016 DENND3A2RUS2 1198 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 MGEA5O60502 916 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 GUCY2CP25092 1073 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 RABGGTBP53611 331 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 MCM6Q14566 821 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 PPP2R5AQ15172 486 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 GPR153Q6NV75 609 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 CATSPER4Q7RTX7 472 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 TMCO2Q7Z6W1 182 aaPredicted RBP21.44■■□□□ 1.02
DDX54-207ENST00000550016 CHAMP1Q96JM3 812 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 IFT74Q96LB3 600 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 ZBED2Q9BTP6 218 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 NFKBIZQ9BYH8 718 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 PBX4Q9BYU1 374 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 MINDY3Q9H8M7 445 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 POLD4Q9HCU8 107 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 RGS18Q9NS28 235 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 STK17AQ9UEE5 414 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 CIZ1Q9ULV3 898 aaPredicted RBP21.44■■□□□ 1.02
DDX54-207ENST00000550016 MYO9BQ13459 2157 aa21.44■■□□□ 1.02
DDX54-207ENST00000550016 LAMA2P24043 3122 aaKnown RBP21.43■■□□□ 1.02
DDX54-207ENST00000550016 LRRIQ4A6NIV6 560 aa21.43■■□□□ 1.02
DDX54-207ENST00000550016 HIP1RO75146 1068 aa21.43■■□□□ 1.02
DDX54-207ENST00000550016 GJB5O95377 273 aa21.43■■□□□ 1.02
DDX54-207ENST00000550016 ZSCAN20P17040 1043 aaPredicted RBP21.43■■□□□ 1.02
DDX54-207ENST00000550016 DNAJB2P25686 324 aa21.43■■□□□ 1.02
DDX54-207ENST00000550016 PBX2P40425 430 aa21.43■■□□□ 1.02
DDX54-207ENST00000550016 SHC4Q6S5L8 630 aa21.43■■□□□ 1.02
DDX54-207ENST00000550016 CCDC73Q6ZRK6 1079 aa21.43■■□□□ 1.02
DDX54-207ENST00000550016 BSNDQ8WZ55 320 aa21.43■■□□□ 1.02
DDX54-207ENST00000550016 LARP4BQ92615 738 aaKnown RBP21.43■■□□□ 1.02
DDX54-207ENST00000550016 DRC1Q96MC2 740 aa21.43■■□□□ 1.02
DDX54-207ENST00000550016 PANK2Q9BZ23 570 aa21.43■■□□□ 1.02
DDX54-207ENST00000550016 SCAND2PQ9GZW5 306 aaPredicted RBP21.43■■□□□ 1.02
DDX54-207ENST00000550016 CHST12Q9NRB3 414 aa21.43■■□□□ 1.02
DDX54-207ENST00000550016 C1orf112Q9NSG2 853 aa21.43■■□□□ 1.02
DDX54-207ENST00000550016 TLL1O43897 1013 aa21.42■■□□□ 1.02
DDX54-207ENST00000550016 UPP2O95045 317 aa21.42■■□□□ 1.02
DDX54-207ENST00000550016 NAMPTP43490 491 aa21.42■■□□□ 1.02
DDX54-207ENST00000550016 DHX8Q14562 1220 aaKnown RBP21.42■■□□□ 1.02
DDX54-207ENST00000550016 PCBP1Q15365 356 aaKnown RBP eCLIP21.42■■□□□ 1.02
DDX54-207ENST00000550016 ARSHQ5FYA8 562 aa21.42■■□□□ 1.02
DDX54-207ENST00000550016 FAM117BQ6P1L5 589 aa21.42■■□□□ 1.02
DDX54-207ENST00000550016 SLC24A5Q71RS6 500 aa21.42■■□□□ 1.02
DDX54-207ENST00000550016 GPBP1Q86WP2 473 aa21.42■■□□□ 1.02
DDX54-207ENST00000550016 DAW1Q8N136 415 aa21.42■■□□□ 1.02
DDX54-207ENST00000550016 RAD9AQ99638 391 aa21.42■■□□□ 1.02
DDX54-207ENST00000550016 RNF216Q9NWF9 866 aaPredicted RBP21.42■■□□□ 1.02
DDX54-207ENST00000550016 FNDC1Q4ZHG4 1894 aaPredicted RBP21.41■■□□□ 1.02
DDX54-207ENST00000550016 C9IYK1 514 aa21.41■■□□□ 1.02
DDX54-207ENST00000550016 INO80B-WBP1J3KQ70 363 aa21.41■■□□□ 1.02
DDX54-207ENST00000550016 STAT6P42226 847 aa21.41■■□□□ 1.02
DDX54-207ENST00000550016 SARSP49591 514 aaKnown RBP21.41■■□□□ 1.02
DDX54-207ENST00000550016 MAPK7Q13164 816 aa21.41■■□□□ 1.02
DDX54-207ENST00000550016 ZBTB8OSQ8IWT0 167 aa21.41■■□□□ 1.02
DDX54-207ENST00000550016 C17orf75Q9HAS0 396 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms