RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 NPY5RQ15761 445 aa7.56□□□□□ -1.2
TMEM116-208ENST00000549537 GRIK4Q16099 956 aa7.56□□□□□ -1.2
TMEM116-208ENST00000549537 JAKMIP3Q5VZ66 844 aa7.56□□□□□ -1.2
TMEM116-208ENST00000549537 LYPD4Q6UWN0 246 aa7.56□□□□□ -1.2
TMEM116-208ENST00000549537 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.56□□□□□ -1.2
TMEM116-208ENST00000549537 LYSMD3Q7Z3D4 306 aa7.56□□□□□ -1.2
TMEM116-208ENST00000549537 SPRED2Q7Z698 418 aa7.56□□□□□ -1.2
TMEM116-208ENST00000549537 TMCO2Q7Z6W1 182 aaPredicted RBP7.56□□□□□ -1.2
TMEM116-208ENST00000549537 REXO1Q8N1G1 1221 aaKnown RBP7.56□□□□□ -1.2
TMEM116-208ENST00000549537 BEND7Q8N7W2 519 aaPredicted RBP7.56□□□□□ -1.2
TMEM116-208ENST00000549537 DBF4BQ8NFT6 615 aa7.56□□□□□ -1.2
TMEM116-208ENST00000549537 ZNF592Q92610 1267 aa7.56□□□□□ -1.2
TMEM116-208ENST00000549537 LENG9Q96B70 501 aa7.56□□□□□ -1.2
TMEM116-208ENST00000549537 ZNF274Q96GC6 653 aaPredicted RBP7.56□□□□□ -1.2
TMEM116-208ENST00000549537 UPF3BQ9BZI7 483 aaKnown RBP7.56□□□□□ -1.2
TMEM116-208ENST00000549537 SMARCAD1Q9H4L7 1026 aa7.56□□□□□ -1.2
TMEM116-208ENST00000549537 VRTNQ9H8Y1 702 aa7.56□□□□□ -1.2
TMEM116-208ENST00000549537 ERAP1Q9NZ08 941 aa7.56□□□□□ -1.2
TMEM116-208ENST00000549537 SLC9A2Q9UBY0 812 aa7.56□□□□□ -1.2
TMEM116-208ENST00000549537 CYP46A1Q9Y6A2 500 aa7.56□□□□□ -1.2
TMEM116-208ENST00000549537 COL4A6Q14031 1691 aa7.56□□□□□ -1.2
TMEM116-208ENST00000549537 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.55□□□□□ -1.2
TMEM116-208ENST00000549537 LCHNA4D1U4 455 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 M0R2N6 131 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 MSTNO14793 375 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 EFCAB14O75071 495 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 GJB5O95377 273 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 CHRNA1P02708 482 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 ADH1AP07327 375 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 CTSHP09668 335 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 POU3F3P20264 500 aaPredicted RBP7.55□□□□□ -1.2
TMEM116-208ENST00000549537 MARK3P27448 753 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 CIITAP33076 1130 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 KCNJ6P48051 423 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 PPFIA1Q13136 1202 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 IKBKEQ14164 716 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 PLCB4Q15147 1175 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 MCTP2Q6DN12 878 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 ABHD15Q6UXT9 468 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 PLPPR4Q7Z2D5 763 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 RASGRP4Q8TDF6 673 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 CCDC12Q8WUD4 166 aaPredicted RBP7.55□□□□□ -1.2
TMEM116-208ENST00000549537 SREK1Q8WXA9 508 aaKnown RBP7.55□□□□□ -1.2
TMEM116-208ENST00000549537 GLG1Q92896 1179 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 ZBTB10Q96DT7 871 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 GAS2L1Q99501 681 aaPredicted RBP7.55□□□□□ -1.2
TMEM116-208ENST00000549537 SDF4Q9BRK5 362 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 SLC26A6Q9BXS9 759 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 ZNF395Q9H8N7 513 aaPredicted RBP7.55□□□□□ -1.2
TMEM116-208ENST00000549537 C6orf50Q9HD87 102 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 SH3GLB2Q9NR46 395 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 VPS54Q9P1Q0 977 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 TUBE1Q9UJT0 475 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 KAT6AQ92794 2004 aa7.55□□□□□ -1.2
TMEM116-208ENST00000549537 WDR81Q562E7 1941 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 WDFY4Q6ZS81 3184 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 PRRC2BQ5JSZ5 2229 aaKnown RBP7.54□□□□□ -1.2
TMEM116-208ENST00000549537 ZBTB42B2RXF5 422 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 RFXAPO00287 272 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 IPO5O00410 1097 aaKnown RBP7.54□□□□□ -1.2
TMEM116-208ENST00000549537 LPXNO60711 386 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 INSRRP14616 1297 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 ATP4AP20648 1035 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 GNA11P29992 359 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 PTGIRP43119 386 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 STAT5BP51692 787 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 MCCD1P59942 119 aaPredicted RBP7.54□□□□□ -1.2
TMEM116-208ENST00000549537 ANAPC15P60006 121 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 HTRA4P83105 476 aaPredicted RBP7.54□□□□□ -1.2
TMEM116-208ENST00000549537 LPIN1Q14693 890 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 TAF2Q6P1X5 1199 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 PLA2G4DQ86XP0 818 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 CCDC60Q8IWA6 550 aaPredicted RBP7.54□□□□□ -1.2
TMEM116-208ENST00000549537 CCDC148Q8NFR7 591 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 TRAPPC12Q8WVT3 735 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 AIFM3Q96NN9 605 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 RAD9AQ99638 391 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 PDRG1Q9NUG6 133 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 RAPGEFL1Q9UHV5 662 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 TPCN1Q9ULQ1 816 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 PCDHA2Q9Y5H9 948 aa7.54□□□□□ -1.2
TMEM116-208ENST00000549537 LINC01553A4QN01 128 aa7.53□□□□□ -1.2
TMEM116-208ENST00000549537 RRN3P2A6NIE6 340 aa7.53□□□□□ -1.2
TMEM116-208ENST00000549537 KIF28PB7ZC32 967 aa7.53□□□□□ -1.2
TMEM116-208ENST00000549537 DDX39AO00148 427 aaKnown RBP7.53□□□□□ -1.2
TMEM116-208ENST00000549537 PFKFB2O60825 505 aa7.53□□□□□ -1.2
TMEM116-208ENST00000549537 DEXIO95424 95 aa7.53□□□□□ -1.2
TMEM116-208ENST00000549537 TCF3P15923 654 aa7.53□□□□□ -1.2
TMEM116-208ENST00000549537 ZNF76P36508 570 aa7.53□□□□□ -1.2
TMEM116-208ENST00000549537 SLC26A2P50443 739 aa7.53□□□□□ -1.2
TMEM116-208ENST00000549537 IGBP1P78318 339 aa7.53□□□□□ -1.2
TMEM116-208ENST00000549537 SETQ01105 290 aaPredicted RBP7.53□□□□□ -1.2
TMEM116-208ENST00000549537 AKAP17AQ02040 695 aaKnown RBP7.53□□□□□ -1.2
TMEM116-208ENST00000549537 SSRP1Q08945 709 aaKnown RBP7.53□□□□□ -1.2
TMEM116-208ENST00000549537 SCRN1Q12765 414 aa7.53□□□□□ -1.2
TMEM116-208ENST00000549537 FBXO47Q5MNV8 452 aa7.53□□□□□ -1.2
TMEM116-208ENST00000549537 ZNF746Q6NUN9 644 aaPredicted RBP7.53□□□□□ -1.2
TMEM116-208ENST00000549537 TRIM22Q8IYM9 498 aa7.53□□□□□ -1.2
TMEM116-208ENST00000549537 DAGLBQ8NCG7 672 aa7.53□□□□□ -1.2
TMEM116-208ENST00000549537 BICD2Q8TD16 824 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms