RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 GAS7O60861 476 aa18.57■□□□□ 0.56
SSH1-208ENST00000548522 TBC1D8BQ0IIM8 1120 aa18.57■□□□□ 0.56
SSH1-208ENST00000548522 TARBP2Q15633 366 aaKnown RBP18.57■□□□□ 0.56
SSH1-208ENST00000548522 CCDC12Q8WUD4 166 aaPredicted RBP18.57■□□□□ 0.56
SSH1-208ENST00000548522 SLC5A5Q92911 643 aa18.57■□□□□ 0.56
SSH1-208ENST00000548522 PRRX2Q99811 253 aa18.57■□□□□ 0.56
SSH1-208ENST00000548522 ADAM7Q9H2U9 754 aa18.57■□□□□ 0.56
SSH1-208ENST00000548522 MYH9P35579 1960 aaKnown RBP18.56■□□□□ 0.56
SSH1-208ENST00000548522 H0Y858 1186 aa18.56■□□□□ 0.56
SSH1-208ENST00000548522 B4GALT3O60512 393 aa18.56■□□□□ 0.56
SSH1-208ENST00000548522 ZC3H11AO75152 810 aaKnown RBP eCLIP18.56■□□□□ 0.56
SSH1-208ENST00000548522 ASGR2P07307 311 aa18.56■□□□□ 0.56
SSH1-208ENST00000548522 GNA11P29992 359 aa18.56■□□□□ 0.56
SSH1-208ENST00000548522 MTERF2Q49AM1 385 aa18.56■□□□□ 0.56
SSH1-208ENST00000548522 RARS2Q5T160 578 aaKnown RBP18.56■□□□□ 0.56
SSH1-208ENST00000548522 LRCH2Q5VUJ6 765 aa18.56■□□□□ 0.56
SSH1-208ENST00000548522 RIPOR3Q96MK2 946 aa18.56■□□□□ 0.56
SSH1-208ENST00000548522 CEP89Q96ST8 783 aa18.56■□□□□ 0.56
SSH1-208ENST00000548522 SLC26A6Q9BXS9 759 aa18.56■□□□□ 0.56
SSH1-208ENST00000548522 ZBP1Q9H171 429 aa18.56■□□□□ 0.56
SSH1-208ENST00000548522 NCOA5Q9HCD5 579 aaKnown RBP18.56■□□□□ 0.56
SSH1-208ENST00000548522 NRBP2Q9NSY0 501 aa18.56■□□□□ 0.56
SSH1-208ENST00000548522 SEPT9Q9UHD8 586 aaPredicted RBP18.56■□□□□ 0.56
SSH1-208ENST00000548522 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.55■□□□□ 0.56
SSH1-208ENST00000548522 GFRA3O60609 400 aa18.55■□□□□ 0.56
SSH1-208ENST00000548522 CDC45O75419 566 aa18.55■□□□□ 0.56
SSH1-208ENST00000548522 STBD1O95210 358 aa18.55■□□□□ 0.56
SSH1-208ENST00000548522 TDP2O95551 362 aa18.55■□□□□ 0.56
SSH1-208ENST00000548522 HMGB1P09429 215 aaKnown RBP18.55■□□□□ 0.56
SSH1-208ENST00000548522 EPCAMP16422 314 aa18.55■□□□□ 0.56
SSH1-208ENST00000548522 TPRNQ4KMQ1 711 aa18.55■□□□□ 0.56
SSH1-208ENST00000548522 MCTP2Q6DN12 878 aa18.55■□□□□ 0.56
SSH1-208ENST00000548522 VPS52Q8N1B4 723 aa18.55■□□□□ 0.56
SSH1-208ENST00000548522 RIT2Q99578 217 aa18.55■□□□□ 0.56
SSH1-208ENST00000548522 VN1R3Q9BXE9 311 aa18.55■□□□□ 0.56
SSH1-208ENST00000548522 SORCS3Q9UPU3 1222 aa18.55■□□□□ 0.56
SSH1-208ENST00000548522 NR2E1Q9Y466 385 aa18.55■□□□□ 0.56
SSH1-208ENST00000548522 SNX14Q9Y5W7 946 aa18.55■□□□□ 0.56
SSH1-208ENST00000548522 A0A087WZ62 844 aa18.54■□□□□ 0.56
SSH1-208ENST00000548522 PSMD10O75832 226 aa18.54■□□□□ 0.56
SSH1-208ENST00000548522 CXCL14O95715 111 aa18.54■□□□□ 0.56
SSH1-208ENST00000548522 EOMESO95936 686 aa18.54■□□□□ 0.56
SSH1-208ENST00000548522 PHKA2P46019 1235 aa18.54■□□□□ 0.56
SSH1-208ENST00000548522 JAK3P52333 1124 aa18.54■□□□□ 0.56
SSH1-208ENST00000548522 MTMR3Q13615 1198 aa18.54■□□□□ 0.56
SSH1-208ENST00000548522 CES5AQ6NT32 575 aa18.54■□□□□ 0.56
SSH1-208ENST00000548522 CENPQQ7L2Z9 268 aaPredicted RBP18.54■□□□□ 0.56
SSH1-208ENST00000548522 KSR1Q8IVT5 923 aa18.54■□□□□ 0.56
SSH1-208ENST00000548522 TMEM105Q8N8V8 129 aa18.54■□□□□ 0.56
SSH1-208ENST00000548522 ATOH1Q92858 354 aaPredicted RBP18.54■□□□□ 0.56
SSH1-208ENST00000548522 KCNB2Q92953 911 aa18.54■□□□□ 0.56
SSH1-208ENST00000548522 TMEM169Q96HH4 297 aa18.54■□□□□ 0.56
SSH1-208ENST00000548522 FDXACB1Q9BRP7 624 aaPredicted RBP18.54■□□□□ 0.56
SSH1-208ENST00000548522 TEKT3Q9BXF9 490 aa18.54■□□□□ 0.56
SSH1-208ENST00000548522 RNF26Q9BY78 433 aaPredicted RBP18.54■□□□□ 0.56
SSH1-208ENST00000548522 MRPL9Q9BYD2 267 aaKnown RBP18.54■□□□□ 0.56
SSH1-208ENST00000548522 DACT1Q9NYF0 836 aa18.54■□□□□ 0.56
SSH1-208ENST00000548522 INPP5FQ9Y2H2 1132 aa18.54■□□□□ 0.56
SSH1-208ENST00000548522 ST18O60284 1047 aa18.53■□□□□ 0.56
SSH1-208ENST00000548522 RPS6KB1P23443 525 aa18.53■□□□□ 0.56
SSH1-208ENST00000548522 SFNP31947 248 aa18.53■□□□□ 0.56
SSH1-208ENST00000548522 ALDH7A1P49419 539 aaKnown RBP18.53■□□□□ 0.56
SSH1-208ENST00000548522 CCT2P78371 535 aaKnown RBP18.53■□□□□ 0.56
SSH1-208ENST00000548522 AKAP17AQ02040 695 aaKnown RBP18.53■□□□□ 0.56
SSH1-208ENST00000548522 ITIH3Q06033 890 aa18.53■□□□□ 0.56
SSH1-208ENST00000548522 BLOC1S2Q6QNY1 142 aa18.53■□□□□ 0.56
SSH1-208ENST00000548522 CCDC148Q8NFR7 591 aa18.53■□□□□ 0.56
SSH1-208ENST00000548522 BICD2Q8TD16 824 aa18.53■□□□□ 0.56
SSH1-208ENST00000548522 TBCKQ8TEA7 893 aa18.53■□□□□ 0.56
SSH1-208ENST00000548522 NECTIN4Q96NY8 510 aa18.53■□□□□ 0.56
SSH1-208ENST00000548522 GCOM2Q9BZD3 368 aaPredicted RBP18.53■□□□□ 0.56
SSH1-208ENST00000548522 TBC1D13Q9NVG8 400 aa18.53■□□□□ 0.56
SSH1-208ENST00000548522 DNAJB4Q9UDY4 337 aa18.53■□□□□ 0.56
SSH1-208ENST00000548522 PIN4Q9Y237 131 aaKnown RBP18.53■□□□□ 0.56
SSH1-208ENST00000548522 IGKV6-21A0A0C4DH24 114 aa18.52■□□□□ 0.56
SSH1-208ENST00000548522 PLA2G4FQ68DD2 849 aa18.52■□□□□ 0.56
SSH1-208ENST00000548522 TWF2Q6IBS0 349 aaKnown RBP18.52■□□□□ 0.56
SSH1-208ENST00000548522 B3GNT9Q6UX72 402 aa18.52■□□□□ 0.56
SSH1-208ENST00000548522 MIER3Q7Z3K6 550 aa18.52■□□□□ 0.56
SSH1-208ENST00000548522 ZNF710Q8N1W2 664 aa18.52■□□□□ 0.56
SSH1-208ENST00000548522 IGSF21Q96ID5 467 aa18.52■□□□□ 0.56
SSH1-208ENST00000548522 NIFKQ9BYG3 293 aaKnown RBP18.52■□□□□ 0.56
SSH1-208ENST00000548522 AGXT2Q9BYV1 514 aa18.52■□□□□ 0.56
SSH1-208ENST00000548522 GBP3Q9H0R5 595 aa18.52■□□□□ 0.56
SSH1-208ENST00000548522 NRDE2Q9H7Z3 1164 aa18.52■□□□□ 0.56
SSH1-208ENST00000548522 WDR81Q562E7 1941 aa18.52■□□□□ 0.56
SSH1-208ENST00000548522 GALR2O43603 387 aaPredicted RBP18.51■□□□□ 0.55
SSH1-208ENST00000548522 CTSAP10619 480 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 IFNAR1P17181 557 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 HSPA4P34932 840 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 MTHFRP42898 656 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 SLC11A1P49279 550 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 USP11P51784 963 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 AFF1P51825 1210 aaKnown RBP18.51■□□□□ 0.55
SSH1-208ENST00000548522 XKR3Q5GH77 459 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 KIAA1841Q6NSI8 718 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 TMC5Q6UXY8 1006 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 RHPN2Q8IUC4 686 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 UBALD2Q8IYN6 164 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 TDRD5Q8NAT2 981 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms