RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 ZCCHC14Q8WYQ9 949 aaKnown RBP5.4□□□□□ -1.54
PTCH1-216ENST00000548379 AIFM3Q96NN9 605 aa5.4□□□□□ -1.54
PTCH1-216ENST00000548379 FDXACB1Q9BRP7 624 aaPredicted RBP5.4□□□□□ -1.54
PTCH1-216ENST00000548379 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.4□□□□□ -1.54
PTCH1-216ENST00000548379 FBXO10Q9UK96 956 aa5.4□□□□□ -1.54
PTCH1-216ENST00000548379 SMARCA2P51531 1590 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 KRTAP9-6A0A140TA67 174 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 KIF3BO15066 747 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 NDUFS2O75306 463 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 CYP7B1O75881 506 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 KLHL18O94889 574 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 U2AF1L5P0DN76 240 aaPredicted RBP5.39□□□□□ -1.55
PTCH1-216ENST00000548379 AKAP5P24588 427 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 CYP2C19P33261 490 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 WASP42768 502 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 TBX4P57082 545 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 U2AF1Q01081 240 aaKnown RBP eCLIP5.39□□□□□ -1.55
PTCH1-216ENST00000548379 PPARAQ07869 468 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 SMAD4Q13485 552 aaKnown RBP5.39□□□□□ -1.55
PTCH1-216ENST00000548379 GTF2H3Q13889 308 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 EIF4HQ15056 248 aaKnown RBP5.39□□□□□ -1.55
PTCH1-216ENST00000548379 ACAP2Q15057 778 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 ADRM1Q16186 407 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 DGKDQ16760 1214 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 RRP12Q5JTH9 1297 aaKnown RBP5.39□□□□□ -1.55
PTCH1-216ENST00000548379 GAREM2Q75VX8 874 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 EPM2AIP1Q7L775 607 aaPredicted RBP5.39□□□□□ -1.55
PTCH1-216ENST00000548379 C14orf80Q86SX3 495 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 SAPCD2Q86UD0 394 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 TPH2Q8IWU9 490 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 KCNN1Q92952 543 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 NKD2Q969F2 451 aaPredicted RBP5.39□□□□□ -1.55
PTCH1-216ENST00000548379 ZBTB8AQ96BR9 441 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 SLC2A13Q96QE2 648 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 NOL10Q9BSC4 688 aaKnown RBP5.39□□□□□ -1.55
PTCH1-216ENST00000548379 CROTQ9UKG9 612 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 PMF1-BGLAPU3KQ54 211 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 PDS5BQ9NTI5 1447 aa5.39□□□□□ -1.55
PTCH1-216ENST00000548379 BAZ1BQ9UIG0 1483 aaKnown RBP5.39□□□□□ -1.55
PTCH1-216ENST00000548379 A0A0G2JNJ9 132 aa5.38□□□□□ -1.55
PTCH1-216ENST00000548379 H0Y858 1186 aa5.38□□□□□ -1.55
PTCH1-216ENST00000548379 RPL13P26373 211 aaKnown RBP5.38□□□□□ -1.55
PTCH1-216ENST00000548379 MAP3K12Q12852 859 aa5.38□□□□□ -1.55
PTCH1-216ENST00000548379 TOP3AQ13472 1001 aaPredicted RBP5.38□□□□□ -1.55
PTCH1-216ENST00000548379 SSPNQ14714 243 aa5.38□□□□□ -1.55
PTCH1-216ENST00000548379 WDR72Q3MJ13 1102 aa5.38□□□□□ -1.55
PTCH1-216ENST00000548379 VWA3BQ502W6 1294 aa5.38□□□□□ -1.55
PTCH1-216ENST00000548379 MCTP1Q6DN14 999 aa5.38□□□□□ -1.55
PTCH1-216ENST00000548379 B3GNT9Q6UX72 402 aa5.38□□□□□ -1.55
PTCH1-216ENST00000548379 FATE1Q969F0 183 aa5.38□□□□□ -1.55
PTCH1-216ENST00000548379 HIST1H2AHQ96KK5 128 aa5.38□□□□□ -1.55
PTCH1-216ENST00000548379 HIST1H2AJQ99878 128 aa5.38□□□□□ -1.55
PTCH1-216ENST00000548379 OSBPL6Q9BZF3 934 aa5.38□□□□□ -1.55
PTCH1-216ENST00000548379 SLC12A5Q9H2X9 1139 aa5.38□□□□□ -1.55
PTCH1-216ENST00000548379 Q9UFV3 132 aa5.38□□□□□ -1.55
PTCH1-216ENST00000548379 ZBTB21Q9ULJ3 1066 aa5.38□□□□□ -1.55
PTCH1-216ENST00000548379 NOB1Q9ULX3 412 aaKnown RBP5.38□□□□□ -1.55
PTCH1-216ENST00000548379 IRAK3Q9Y616 596 aa5.38□□□□□ -1.55
PTCH1-216ENST00000548379 SH3D21A4FU49 640 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 NRP2O60462 931 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 POLD1P28340 1107 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 IL13P35225 146 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 ETV4P43268 484 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 MALLQ13021 153 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 TCIRG1Q13488 830 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 TRIM68Q6AZZ1 485 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 WDR75Q8IWA0 830 aaKnown RBP5.37□□□□□ -1.55
PTCH1-216ENST00000548379 THEMISQ8N1K5 641 aaPredicted RBP5.37□□□□□ -1.55
PTCH1-216ENST00000548379 WDR48Q8TAF3 677 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 COA7Q96BR5 231 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 DYDC2Q96IM9 177 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 FAM84AQ96KN4 292 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 CSRNP2Q9H175 543 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 ANLNQ9NQW6 1124 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 POLR3BQ9NW08 1133 aaPredicted RBP5.37□□□□□ -1.55
PTCH1-216ENST00000548379 SERPINB13Q9UIV8 391 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 USP18Q9UMW8 372 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 HMGXB3Q12766 1538 aa5.37□□□□□ -1.55
PTCH1-216ENST00000548379 A0A1W2PR48 441 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 GOLGA6CA6NDK9 693 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 GOLGA6BA6NDN3 693 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 IL33O95760 270 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 POU2F2P09086 479 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 CT47B1P0C2W7 299 aaPredicted RBP5.36□□□□□ -1.55
PTCH1-216ENST00000548379 GOLGA6DP0CG33 693 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 ATF3P18847 181 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 EDNRBP24530 442 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 GNALP38405 381 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 MCAMP43121 646 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 CDK17Q00537 523 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 PPP3CAQ08209 521 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 HLTFQ14527 1009 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTCH1-216ENST00000548379 ZNF827Q17R98 1081 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 GFOD2Q3B7J2 385 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 CNKSR3Q6P9H4 555 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 BTNL9Q6UXG8 535 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 SYDE1Q6ZW31 735 aaPredicted RBP5.36□□□□□ -1.55
PTCH1-216ENST00000548379 PRR18Q8N4B5 295 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 BHLHE22Q8NFJ8 381 aaPredicted RBP5.36□□□□□ -1.55
PTCH1-216ENST00000548379 RUNDC1Q96C34 613 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms