RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 S1PR5Q9H228 398 aa17.13■□□□□ 0.33
SNX29P1-201ENST00000548357 AAASQ9NRG9 546 aa17.13■□□□□ 0.33
SNX29P1-201ENST00000548357 SP100P23497 879 aaPredicted RBP17.12■□□□□ 0.33
SNX29P1-201ENST00000548357 TMOD1P28289 359 aa17.12■□□□□ 0.33
SNX29P1-201ENST00000548357 SCRN1Q12765 414 aa17.12■□□□□ 0.33
SNX29P1-201ENST00000548357 CBX2Q14781 532 aaPredicted RBP17.12■□□□□ 0.33
SNX29P1-201ENST00000548357 ANO5Q75V66 913 aa17.12■□□□□ 0.33
SNX29P1-201ENST00000548357 SLC39A11Q8N1S5 342 aa17.12■□□□□ 0.33
SNX29P1-201ENST00000548357 LRRC43Q8N309 656 aa17.12■□□□□ 0.33
SNX29P1-201ENST00000548357 ZNF274Q96GC6 653 aaPredicted RBP17.12■□□□□ 0.33
SNX29P1-201ENST00000548357 FBXL18Q96ME1 805 aa17.12■□□□□ 0.33
SNX29P1-201ENST00000548357 ZNF558Q96NG5 402 aa17.12■□□□□ 0.33
SNX29P1-201ENST00000548357 SCLT1Q96NL6 688 aa17.12■□□□□ 0.33
SNX29P1-201ENST00000548357 VAV3Q9UKW4 847 aa17.12■□□□□ 0.33
SNX29P1-201ENST00000548357 CYP46A1Q9Y6A2 500 aa17.12■□□□□ 0.33
SNX29P1-201ENST00000548357 USP34Q70CQ2 3546 aa17.12■□□□□ 0.33
SNX29P1-201ENST00000548357 A0A0U1RQF3 1178 aa17.11■□□□□ 0.33
SNX29P1-201ENST00000548357 CTDNEP1O95476 244 aa17.11■□□□□ 0.33
SNX29P1-201ENST00000548357 ZSCAN20P17040 1043 aaPredicted RBP17.11■□□□□ 0.33
SNX29P1-201ENST00000548357 TECP42680 631 aa17.11■□□□□ 0.33
SNX29P1-201ENST00000548357 NPEPPSP55786 919 aa17.11■□□□□ 0.33
SNX29P1-201ENST00000548357 ANKRD54Q6NXT1 300 aa17.11■□□□□ 0.33
SNX29P1-201ENST00000548357 TRIM22Q8IYM9 498 aa17.11■□□□□ 0.33
SNX29P1-201ENST00000548357 AUTS2Q8WXX7 1259 aa17.11■□□□□ 0.33
SNX29P1-201ENST00000548357 RPGRIP1Q96KN7 1286 aa17.11■□□□□ 0.33
SNX29P1-201ENST00000548357 PHF20Q9BVI0 1012 aa17.11■□□□□ 0.33
SNX29P1-201ENST00000548357 ENTPD7Q9NQZ7 604 aa17.11■□□□□ 0.33
SNX29P1-201ENST00000548357 BMP2KQ9NSY1 1161 aaPredicted RBP17.11■□□□□ 0.33
SNX29P1-201ENST00000548357 LZTS1Q9Y250 596 aa17.11■□□□□ 0.33
SNX29P1-201ENST00000548357 DOCK6Q96HP0 2047 aa17.11■□□□□ 0.33
SNX29P1-201ENST00000548357 DDX11L8A8MPP1 907 aa17.1■□□□□ 0.33
SNX29P1-201ENST00000548357 NONOQ15233 471 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNX29P1-201ENST00000548357 LETM2Q2VYF4 491 aa17.1■□□□□ 0.33
SNX29P1-201ENST00000548357 XKR3Q5GH77 459 aa17.1■□□□□ 0.33
SNX29P1-201ENST00000548357 KANK3Q6NY19 840 aa17.1■□□□□ 0.33
SNX29P1-201ENST00000548357 RDM1Q8NG50 284 aa17.1■□□□□ 0.33
SNX29P1-201ENST00000548357 EDAQ92838 391 aa17.1■□□□□ 0.33
SNX29P1-201ENST00000548357 PHF7Q9BWX1 381 aaPredicted RBP17.1■□□□□ 0.33
SNX29P1-201ENST00000548357 VN1R3Q9BXE9 311 aa17.1■□□□□ 0.33
SNX29P1-201ENST00000548357 TM6SF1Q9BZW5 370 aa17.1■□□□□ 0.33
SNX29P1-201ENST00000548357 PDRG1Q9NUG6 133 aa17.1■□□□□ 0.33
SNX29P1-201ENST00000548357 DDX25Q9UHL0 483 aaKnown RBP17.1■□□□□ 0.33
SNX29P1-201ENST00000548357 TPCN1Q9ULQ1 816 aa17.1■□□□□ 0.33
SNX29P1-201ENST00000548357 MTCL1Q9Y4B5 1905 aaKnown RBP17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 TRIP11Q15643 1979 aa17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 CPLX1O14810 134 aa17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 MAFO75444 373 aaPredicted RBP17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 LARGE1O95461 756 aa17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 PHKA2P46019 1235 aa17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 AFF1P51825 1210 aaKnown RBP17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 MOXD1Q6UVY6 613 aa17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 TMEM184AQ6ZMB5 413 aa17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 ALYREFQ86V81 257 aaKnown RBP17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 RHPN2Q8IUC4 686 aa17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 ABI1Q8IZP0 508 aa17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 HAS1Q92839 578 aa17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 PHOX2BQ99453 314 aa17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 CDCA3Q99618 268 aaPredicted RBP17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 MINDY3Q9H8M7 445 aa17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 KCNMB3Q9NPA1 279 aa17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 SPG21Q9NZD8 308 aa17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 SUCLA2Q9P2R7 463 aaPredicted RBP17.09■□□□□ 0.33
SNX29P1-201ENST00000548357 C2orf71A6NGG8 1288 aa17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 ZBTB39O15060 712 aa17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 HOXA2O43364 376 aa17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 WEE2P0C1S8 567 aa17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 BCAR1P56945 870 aa17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 ZXDAP98168 799 aa17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 NHLH1Q02575 133 aa17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 IER5LQ5T953 404 aa17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 FAM43BQ6ZT52 329 aaPredicted RBP17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 TMC7Q7Z402 723 aa17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 POTEDQ86YR6 584 aa17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 PRSS33Q8NF86 280 aa17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 NLRP4Q96MN2 994 aa17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 GCOM2Q9BZD3 368 aaPredicted RBP17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 IFT122Q9HBG6 1241 aa17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 DNAJB4Q9UDY4 337 aa17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 PIN4Q9Y237 131 aaKnown RBP17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 DOCK8Q8NF50 2099 aa17.08■□□□□ 0.32
SNX29P1-201ENST00000548357 TMEM221A6NGB7 291 aa17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 M0R296 226 aa17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 WNT7AO00755 349 aa17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 CLASP2O75122 1294 aaKnown RBP17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 ZC3H11AO75152 810 aaKnown RBP eCLIP17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 EOMESO95936 686 aa17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 PSMC5P62195 406 aa17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 PPP2R5CQ13362 524 aa17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 PDE12Q6L8Q7 609 aaKnown RBP17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 TRIM67Q6ZTA4 783 aa17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 PIK3AP1Q6ZUJ8 805 aa17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 KRT25Q7Z3Z0 450 aa17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 TMEM143Q96AN5 459 aa17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 C22orf23Q9BZE7 217 aa17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 ZBP1Q9H171 429 aa17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 NRDE2Q9H7Z3 1164 aa17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 CYP26B1Q9NR63 512 aa17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 TBC1D13Q9NVG8 400 aa17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 INPP5FQ9Y2H2 1132 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms