RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 PPM1HQ9ULR3 514 aa8.18□□□□□ -1.1
CCDC59-203ENST00000548126 TPX2Q9ULW0 747 aaKnown RBP8.18□□□□□ -1.1
CCDC59-203ENST00000548126 SYNRGQ9UMZ2 1314 aa8.18□□□□□ -1.1
CCDC59-203ENST00000548126 ROBO3Q96MS0 1386 aa8.18□□□□□ -1.1
CCDC59-203ENST00000548126 KIF28PB7ZC32 967 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.17□□□□□ -1.1
CCDC59-203ENST00000548126 PROB1E7EW31 1015 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 ALDH1L1O75891 902 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 EOMESO95936 686 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 FCER1AP12319 257 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 RAC2P15153 192 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 VCAM1P19320 739 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 CST5P28325 142 aaPredicted RBP8.17□□□□□ -1.1
CCDC59-203ENST00000548126 MECOMQ03112 1051 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 COG2Q14746 738 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 WDR43Q15061 677 aaKnown RBP eCLIP8.17□□□□□ -1.1
CCDC59-203ENST00000548126 HERC4Q5GLZ8 1057 aaPredicted RBP8.17□□□□□ -1.1
CCDC59-203ENST00000548126 SFRP5Q5T4F7 317 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 FYB2Q5VWT5 728 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 LLGL2Q6P1M3 1020 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 LILRA6Q6PI73 481 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 NXPE4Q6UWF7 544 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 PRR23BQ6ZRT6 265 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 C22orf34Q6ZV56 151 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 C12orf40Q86WS4 652 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 CILP2Q8IUL8 1156 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 MFSD4AQ8N468 514 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 PHOSPHO2Q8TCD6 241 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 ATOH1Q92858 354 aaPredicted RBP8.17□□□□□ -1.1
CCDC59-203ENST00000548126 VWCEQ96DN2 955 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 KIAA1683Q9H0B3 1180 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 BICC1Q9H694 974 aaKnown RBP8.17□□□□□ -1.1
CCDC59-203ENST00000548126 DNAJC18Q9H819 358 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 FAM184BQ9ULE4 1060 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 PCDHA4Q9UN74 947 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 UMODL1Q5DID0 1318 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 DMXL1Q9Y485 3027 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 CDK5RAP2Q96SN8 1893 aa8.17□□□□□ -1.1
CCDC59-203ENST00000548126 MYADML2A6NDP7 307 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 SIPA1L1O43166 1804 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 DUSP11O75319 330 aaKnown RBP8.16□□□□□ -1.1
CCDC59-203ENST00000548126 LDHCP07864 332 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 PFKMP08237 780 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 NBPF7P0C2Y1 421 aaPredicted RBP8.16□□□□□ -1.1
CCDC59-203ENST00000548126 TMEM253P0C7T8 217 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 PHKA1P46020 1223 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 PLXNA3P51805 1871 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 PLCB3Q01970 1234 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 RING1Q06587 406 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.16□□□□□ -1.1
CCDC59-203ENST00000548126 PI16Q6UXB8 463 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 ADHFE1Q8IWW8 467 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 TEX11Q8IYF3 940 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 CRACR2BQ8N4Y2 399 aaPredicted RBP8.16□□□□□ -1.1
CCDC59-203ENST00000548126 NEK9Q8TD19 979 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 CHD6Q8TD26 2715 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 ZNF384Q8TF68 577 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 EDAQ92838 391 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 TSR2Q969E8 191 aaKnown RBP8.16□□□□□ -1.1
CCDC59-203ENST00000548126 HSPA12BQ96MM6 686 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 SLC9A7Q96T83 725 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 FEZ1Q99689 392 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 NOC4LQ9BVI4 516 aaKnown RBP8.16□□□□□ -1.1
CCDC59-203ENST00000548126 RPAP3Q9H6T3 665 aaPredicted RBP8.16□□□□□ -1.1
CCDC59-203ENST00000548126 ALG13Q9NP73 1137 aaKnown RBP8.16□□□□□ -1.1
CCDC59-203ENST00000548126 FAM50BQ9Y247 325 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 CNPY2Q9Y2B0 182 aa8.16□□□□□ -1.1
CCDC59-203ENST00000548126 DIS3Q9Y2L1 958 aaKnown RBP8.16□□□□□ -1.1
CCDC59-203ENST00000548126 EYA2O00167 538 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 APAF1O14727 1248 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 GH2P01242 217 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 C6orf222P0C671 652 aaPredicted RBP8.15□□□□□ -1.1
CCDC59-203ENST00000548126 NTF4P34130 210 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 GSTO1P78417 241 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 PLS1Q14651 629 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 ASCL5Q7RTU5 278 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 THAP5Q7Z6K1 395 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 HERC6Q8IVU3 1022 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 SUGP1Q8IWZ8 645 aaKnown RBP8.15□□□□□ -1.1
CCDC59-203ENST00000548126 MB21D1Q8N884 522 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 ANKRD44Q8N8A2 993 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 SLC43A3Q8NBI5 491 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 GDPD5Q8WTR4 605 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 COX4I2Q96KJ9 171 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 BCL11AQ9H165 835 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 WNT8AQ9H1J5 351 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 SPC25Q9HBM1 224 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 ATP13A1Q9HD20 1204 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 MRS2Q9HD23 443 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 MUTYHQ9UIF7 546 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 CYP8B1Q9UNU6 501 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 ATRXP46100 2492 aa8.15□□□□□ -1.1
CCDC59-203ENST00000548126 GVINP1Q7Z2Y8 2422 aa8.14□□□□□ -1.11
CCDC59-203ENST00000548126 ZNF292O60281 2723 aa8.14□□□□□ -1.11
CCDC59-203ENST00000548126 PDS5AQ29RF7 1337 aaKnown RBP8.14□□□□□ -1.11
CCDC59-203ENST00000548126 TMEM221A6NGB7 291 aa8.14□□□□□ -1.11
CCDC59-203ENST00000548126 H3BQ06 376 aaPredicted RBP8.14□□□□□ -1.11
CCDC59-203ENST00000548126 M0R296 226 aa8.14□□□□□ -1.11
CCDC59-203ENST00000548126 PGK2P07205 417 aa8.14□□□□□ -1.11
CCDC59-203ENST00000548126 ACTN1P12814 892 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms