RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 DGKIO75912 1065 aa20.81■□□□□ 0.92
PRPF40B-206ENST00000547764 STAG3L1P0CL83 205 aa20.81■□□□□ 0.92
PRPF40B-206ENST00000547764 FAM189BP81408 668 aa20.81■□□□□ 0.92
PRPF40B-206ENST00000547764 PTPAQ15257 358 aa20.81■□□□□ 0.92
PRPF40B-206ENST00000547764 SRGAP1Q7Z6B7 1085 aa20.81■□□□□ 0.92
PRPF40B-206ENST00000547764 MCPH1Q8NEM0 835 aa20.81■□□□□ 0.92
PRPF40B-206ENST00000547764 ARNTL2Q8WYA1 636 aa20.81■□□□□ 0.92
PRPF40B-206ENST00000547764 ZNF689Q96CS4 500 aaPredicted RBP20.81■□□□□ 0.92
PRPF40B-206ENST00000547764 AK8Q96MA6 479 aa20.81■□□□□ 0.92
PRPF40B-206ENST00000547764 POLR3FQ9H1D9 316 aaPredicted RBP20.81■□□□□ 0.92
PRPF40B-206ENST00000547764 MINDY3Q9H8M7 445 aa20.81■□□□□ 0.92
PRPF40B-206ENST00000547764 RC3H2Q9HBD1 1191 aaKnown RBP20.81■□□□□ 0.92
PRPF40B-206ENST00000547764 DNM3Q9UQ16 869 aa20.81■□□□□ 0.92
PRPF40B-206ENST00000547764 EPOPA6NHQ4 379 aa20.8■□□□□ 0.92
PRPF40B-206ENST00000547764 E9PMD0 336 aa20.8■□□□□ 0.92
PRPF40B-206ENST00000547764 FOSL2P15408 326 aa20.8■□□□□ 0.92
PRPF40B-206ENST00000547764 CYP11B2P19099 503 aa20.8■□□□□ 0.92
PRPF40B-206ENST00000547764 GLRA2P23416 452 aa20.8■□□□□ 0.92
PRPF40B-206ENST00000547764 ERVK-21P61565 698 aa20.8■□□□□ 0.92
PRPF40B-206ENST00000547764 CEBPZQ03701 1054 aaKnown RBP20.8■□□□□ 0.92
PRPF40B-206ENST00000547764 GRIN1Q05586 938 aa20.8■□□□□ 0.92
PRPF40B-206ENST00000547764 CAPSQ13938 189 aa20.8■□□□□ 0.92
PRPF40B-206ENST00000547764 ZRSR1Q15695 479 aaKnown RBP20.8■□□□□ 0.92
PRPF40B-206ENST00000547764 HYIQ5T013 277 aa20.8■□□□□ 0.92
PRPF40B-206ENST00000547764 CATSPER4Q7RTX7 472 aa20.8■□□□□ 0.92
PRPF40B-206ENST00000547764 PNMA5Q96PV4 448 aa20.8■□□□□ 0.92
PRPF40B-206ENST00000547764 TGS1Q96RS0 853 aaKnown RBP20.8■□□□□ 0.92
PRPF40B-206ENST00000547764 LRFN2Q9ULH4 789 aa20.8■□□□□ 0.92
PRPF40B-206ENST00000547764 PCDHB7Q9Y5E2 793 aa20.8■□□□□ 0.92
PRPF40B-206ENST00000547764 RFXAPO00287 272 aa20.79■□□□□ 0.92
PRPF40B-206ENST00000547764 EYA4O95677 639 aa20.79■□□□□ 0.92
PRPF40B-206ENST00000547764 PDIA4P13667 645 aaKnown RBP20.79■□□□□ 0.92
PRPF40B-206ENST00000547764 PHKA2P46019 1235 aa20.79■□□□□ 0.92
PRPF40B-206ENST00000547764 PTENP60484 403 aa20.79■□□□□ 0.92
PRPF40B-206ENST00000547764 POU5F1BQ06416 359 aa20.79■□□□□ 0.92
PRPF40B-206ENST00000547764 TFDP1Q14186 410 aa20.79■□□□□ 0.92
PRPF40B-206ENST00000547764 ADGRE1Q14246 886 aa20.79■□□□□ 0.92
PRPF40B-206ENST00000547764 FAM102BQ5T8I3 360 aa20.79■□□□□ 0.92
PRPF40B-206ENST00000547764 KCNK18Q7Z418 384 aa20.79■□□□□ 0.92
PRPF40B-206ENST00000547764 USP28Q96RU2 1077 aa20.79■□□□□ 0.92
PRPF40B-206ENST00000547764 GAS2L1Q99501 681 aaPredicted RBP20.79■□□□□ 0.92
PRPF40B-206ENST00000547764 CHST12Q9NRB3 414 aa20.79■□□□□ 0.92
PRPF40B-206ENST00000547764 MTUS1Q9ULD2 1270 aa20.79■□□□□ 0.92
PRPF40B-206ENST00000547764 ADGRA3Q8IWK6 1321 aa20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 MARCKSP29966 332 aaPredicted RBP20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 LONP1P36776 959 aaKnown RBP20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 GRB10Q13322 594 aa20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 FOXD4L5Q5VV16 416 aaPredicted RBP20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 CABP7Q86V35 215 aa20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 IFNLR1Q8IU57 520 aaPredicted RBP20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 FIBCD1Q8N539 461 aa20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 FOXD4L4Q8WXT5 416 aaPredicted RBP20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 PLIN2Q99541 437 aa20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 C17orf80Q9BSJ5 609 aa20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 NT5C3AQ9H0P0 336 aa20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 ELAC1Q9H777 363 aaKnown RBP20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 RNF216Q9NWF9 866 aaPredicted RBP20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 TMEM161AQ9NX61 479 aa20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 DACT1Q9NYF0 836 aa20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 PIN4Q9Y237 131 aaKnown RBP20.78■□□□□ 0.92
PRPF40B-206ENST00000547764 COL4A6Q14031 1691 aa20.77■□□□□ 0.92
PRPF40B-206ENST00000547764 ZSCAN22P10073 491 aaPredicted RBP20.77■□□□□ 0.92
PRPF40B-206ENST00000547764 UBA7P41226 1012 aa20.77■□□□□ 0.92
PRPF40B-206ENST00000547764 GATMP50440 423 aa20.77■□□□□ 0.92
PRPF40B-206ENST00000547764 BTG3Q14201 252 aaPredicted RBP20.77■□□□□ 0.92
PRPF40B-206ENST00000547764 ECHDC2Q86YB7 292 aa20.77■□□□□ 0.92
PRPF40B-206ENST00000547764 KCTD17Q8N5Z5 321 aa20.77■□□□□ 0.92
PRPF40B-206ENST00000547764 CDK5RAP3Q96JB5 506 aa20.77■□□□□ 0.92
PRPF40B-206ENST00000547764 POLD4Q9HCU8 107 aa20.77■□□□□ 0.92
PRPF40B-206ENST00000547764 AGPAT5Q9NUQ2 364 aa20.77■□□□□ 0.92
PRPF40B-206ENST00000547764 COL6A3P12111 3177 aa20.77■□□□□ 0.92
PRPF40B-206ENST00000547764 A0A0U1RQF3 1178 aa20.76■□□□□ 0.91
PRPF40B-206ENST00000547764 PKP1Q13835 747 aa20.76■□□□□ 0.91
PRPF40B-206ENST00000547764 TMEM119Q4V9L6 283 aa20.76■□□□□ 0.91
PRPF40B-206ENST00000547764 CMTR2Q8IYT2 770 aaKnown RBP20.76■□□□□ 0.91
PRPF40B-206ENST00000547764 BSNDQ8WZ55 320 aa20.76■□□□□ 0.91
PRPF40B-206ENST00000547764 NFKBIZQ9BYH8 718 aa20.76■□□□□ 0.91
PRPF40B-206ENST00000547764 CSRNP2Q9H175 543 aa20.76■□□□□ 0.91
PRPF40B-206ENST00000547764 FBXO2Q9UK22 296 aaPredicted RBP20.76■□□□□ 0.91
PRPF40B-206ENST00000547764 SRPRBQ9Y5M8 271 aaKnown RBP20.76■□□□□ 0.91
PRPF40B-206ENST00000547764 LRRIQ4A6NIV6 560 aa20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 INO80B-WBP1J3KQ70 363 aa20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 SLC26A4O43511 780 aa20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 F13A1P00488 732 aa20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 LINC00271P0C7V0 271 aa20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 FGFR1P11362 822 aa20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 IGFBP4P22692 258 aa20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 HOXA11P31270 313 aaPredicted RBP20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 MBTD1Q05BQ5 628 aa20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 SLC39A14Q15043 492 aa20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 PAN2Q504Q3 1202 aaKnown RBP20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 TWF2Q6IBS0 349 aaKnown RBP20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 RINT1Q6NUQ1 792 aa20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 TMEM192Q8IY95 271 aa20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 CALML4Q96GE6 196 aa20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 SAMD11Q96NU1 681 aa20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 RUSC1Q9BVN2 902 aa20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 TRAIPQ9BWF2 469 aa20.75■□□□□ 0.91
PRPF40B-206ENST00000547764 LPXNO60711 386 aa20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 ERLIN2O94905 339 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms