RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 HELQQ8TDG4 1101 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 AUTS2Q8WXX7 1259 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 BBXQ8WY36 941 aaPredicted RBP15.29■□□□□ 0.04
CCDC59-202ENST00000547758 RMDN1Q96DB5 314 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 RIC8AQ9NPQ8 531 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 FBXL21Q9UKT6 434 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 DUSP12Q9UNI6 340 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 AKT3Q9Y243 479 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 IRAK3Q9Y616 596 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 EPG5Q9HCE0 2579 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 FOSP01100 380 aaPredicted RBP15.28■□□□□ 0.04
CCDC59-202ENST00000547758 GSPT1P15170 499 aaKnown RBP15.28■□□□□ 0.04
CCDC59-202ENST00000547758 ZNF76P36508 570 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 SREBF1P36956 1147 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 EMP3P54852 163 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 NLRP11P59045 1033 aaKnown RBP15.28■□□□□ 0.04
CCDC59-202ENST00000547758 GIT2Q14161 759 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 WWC2Q6AWC2 1192 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 CCDC149Q6ZUS6 474 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 NIPA1Q7RTP0 329 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 OTOP3Q7RTS5 596 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 DGLUCYQ7Z3D6 616 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 ZNF598Q86UK7 904 aaKnown RBP15.28■□□□□ 0.04
CCDC59-202ENST00000547758 CABP7Q86V35 215 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 RAB11FIP4Q86YS3 637 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 TEX2Q8IWB9 1127 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 FEZF2Q8TBJ5 459 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 KCNG4Q8TDN1 519 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 SLC22A17Q8WUG5 538 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 MAP7D2Q96T17 732 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 ADAMTS10Q9H324 1103 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 SEMA4AQ9H3S1 761 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 CEP131Q9UPN4 1083 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 CACNA1IQ9P0X4 2223 aa15.28■□□□□ 0.04
CCDC59-202ENST00000547758 A0A0U1RQF3 1178 aa15.27■□□□□ 0.04
CCDC59-202ENST00000547758 MAGEB2O15479 319 aa15.27■□□□□ 0.04
CCDC59-202ENST00000547758 DHX15O43143 795 aaKnown RBP15.27■□□□□ 0.04
CCDC59-202ENST00000547758 LMNAP02545 664 aaKnown RBP15.27■□□□□ 0.04
CCDC59-202ENST00000547758 CTSAP10619 480 aa15.27■□□□□ 0.04
CCDC59-202ENST00000547758 EIF4BP23588 611 aaKnown RBP15.27■□□□□ 0.04
CCDC59-202ENST00000547758 CHMLP26374 656 aa15.27■□□□□ 0.04
CCDC59-202ENST00000547758 POLGP54098 1239 aaPredicted RBP15.27■□□□□ 0.04
CCDC59-202ENST00000547758 NAPAP54920 295 aa15.27■□□□□ 0.04
CCDC59-202ENST00000547758 TYW1BQ6NUM6 668 aa15.27■□□□□ 0.04
CCDC59-202ENST00000547758 PPP1R18Q6NYC8 613 aa15.27■□□□□ 0.04
CCDC59-202ENST00000547758 TRMT1LQ7Z2T5 733 aaKnown RBP15.27■□□□□ 0.04
CCDC59-202ENST00000547758 GPR149Q86SP6 731 aa15.27■□□□□ 0.04
CCDC59-202ENST00000547758 TMEM173Q86WV6 379 aaPredicted RBP15.27■□□□□ 0.04
CCDC59-202ENST00000547758 TMEM87BQ96K49 555 aa15.27■□□□□ 0.04
CCDC59-202ENST00000547758 SFXN1Q9H9B4 322 aa15.27■□□□□ 0.04
CCDC59-202ENST00000547758 KCNK12Q9HB15 430 aa15.27■□□□□ 0.04
CCDC59-202ENST00000547758 MAFBQ9Y5Q3 323 aaPredicted RBP15.27■□□□□ 0.04
CCDC59-202ENST00000547758 MIA3Q5JRA6 1907 aa15.27■□□□□ 0.03
CCDC59-202ENST00000547758 MTCL1Q9Y4B5 1905 aaKnown RBP15.26■□□□□ 0.03
CCDC59-202ENST00000547758 ZC3H11AO75152 810 aaKnown RBP eCLIP15.26■□□□□ 0.03
CCDC59-202ENST00000547758 TMOD1P28289 359 aa15.26■□□□□ 0.03
CCDC59-202ENST00000547758 MCM5P33992 734 aa15.26■□□□□ 0.03
CCDC59-202ENST00000547758 LIFRP42702 1097 aa15.26■□□□□ 0.03
CCDC59-202ENST00000547758 ADCY7P51828 1080 aa15.26■□□□□ 0.03
CCDC59-202ENST00000547758 AP3B2Q13367 1082 aa15.26■□□□□ 0.03
CCDC59-202ENST00000547758 TTC22Q5TAA0 569 aa15.26■□□□□ 0.03
CCDC59-202ENST00000547758 EFCAB12Q6NXP0 572 aa15.26■□□□□ 0.03
CCDC59-202ENST00000547758 DDX53Q86TM3 631 aaKnown RBP15.26■□□□□ 0.03
CCDC59-202ENST00000547758 PPFIBP1Q86W92 1011 aa15.26■□□□□ 0.03
CCDC59-202ENST00000547758 PLA2G4DQ86XP0 818 aa15.26■□□□□ 0.03
CCDC59-202ENST00000547758 ZNF710Q8N1W2 664 aa15.26■□□□□ 0.03
CCDC59-202ENST00000547758 EFCAB3Q8N7B9 438 aa15.26■□□□□ 0.03
CCDC59-202ENST00000547758 LINC01465Q8N7H1 131 aa15.26■□□□□ 0.03
CCDC59-202ENST00000547758 FANCBQ8NB91 859 aa15.26■□□□□ 0.03
CCDC59-202ENST00000547758 DACT1Q9NYF0 836 aa15.26■□□□□ 0.03
CCDC59-202ENST00000547758 SLC12A7Q9Y666 1083 aa15.26■□□□□ 0.03
CCDC59-202ENST00000547758 CNTNAP5Q8WYK1 1306 aa15.25■□□□□ 0.03
CCDC59-202ENST00000547758 SPTBN2O15020 2390 aa15.25■□□□□ 0.03
CCDC59-202ENST00000547758 CARNS1A5YM72 827 aa15.25■□□□□ 0.03
CCDC59-202ENST00000547758 FAM86B1E9PN63 330 aa15.25■□□□□ 0.03
CCDC59-202ENST00000547758 IPO5O00410 1097 aaKnown RBP15.25■□□□□ 0.03
CCDC59-202ENST00000547758 SGSM2O43147 1006 aa15.25■□□□□ 0.03
CCDC59-202ENST00000547758 FAM86B2P0C5J1 330 aa15.25■□□□□ 0.03
CCDC59-202ENST00000547758 DARSP14868 501 aaKnown RBP15.25■□□□□ 0.03
CCDC59-202ENST00000547758 GPC3P51654 580 aa15.25■□□□□ 0.03
CCDC59-202ENST00000547758 ZNF746Q6NUN9 644 aaPredicted RBP15.25■□□□□ 0.03
CCDC59-202ENST00000547758 MICU3Q86XE3 530 aa15.25■□□□□ 0.03
CCDC59-202ENST00000547758 KIAA2013Q8IYS2 634 aa15.25■□□□□ 0.03
CCDC59-202ENST00000547758 LRRC71Q8N4P6 559 aa15.25■□□□□ 0.03
CCDC59-202ENST00000547758 RSPH1Q8WYR4 309 aa15.25■□□□□ 0.03
CCDC59-202ENST00000547758 MAP4K1Q92918 833 aa15.25■□□□□ 0.03
CCDC59-202ENST00000547758 IGSF21Q96ID5 467 aa15.25■□□□□ 0.03
CCDC59-202ENST00000547758 ZNF668Q96K58 619 aaPredicted RBP15.25■□□□□ 0.03
CCDC59-202ENST00000547758 SCLT1Q96NL6 688 aa15.25■□□□□ 0.03
CCDC59-202ENST00000547758 IGSF9Q9P2J2 1179 aa15.25■□□□□ 0.03
CCDC59-202ENST00000547758 RBM8AQ9Y5S9 174 aaKnown RBP15.25■□□□□ 0.03
CCDC59-202ENST00000547758 R4GN57 208 aa15.25■□□□□ 0.03
CCDC59-202ENST00000547758 IGLV3-22A0A075B6J6 115 aa15.24■□□□□ 0.03
CCDC59-202ENST00000547758 STK25O00506 426 aa15.24■□□□□ 0.03
CCDC59-202ENST00000547758 NARSO43776 548 aaKnown RBP15.24■□□□□ 0.03
CCDC59-202ENST00000547758 PSAPP07602 524 aa15.24■□□□□ 0.03
CCDC59-202ENST00000547758 FGFR4P22455 802 aa15.24■□□□□ 0.03
CCDC59-202ENST00000547758 CLK2P49760 499 aaKnown RBP15.24■□□□□ 0.03
CCDC59-202ENST00000547758 COL9A3Q14050 684 aaPredicted RBP15.24■□□□□ 0.03
CCDC59-202ENST00000547758 PTPN14Q15678 1187 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms