RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 HOXA2O43364 376 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 PDE8AO60658 829 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 DUSP11O75319 330 aaKnown RBP0.48□□□□□ -2.33
CEP290-203ENST00000547691 SEC24DO94855 1032 aaPredicted RBP0.48□□□□□ -2.33
CEP290-203ENST00000547691 TRIM16O95361 564 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 WISP1O95388 367 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 FGFR2P21802 821 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 CANXP27824 592 aaKnown RBP0.48□□□□□ -2.33
CEP290-203ENST00000547691 ACLYP53396 1101 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 ELLP55199 621 aaPredicted RBP0.48□□□□□ -2.33
CEP290-203ENST00000547691 RHBDL3P58872 404 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 GHRHRQ02643 423 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 TLE2Q04725 743 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 CHRNEQ04844 493 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 DPTQ07507 201 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 DUSP4Q13115 394 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 SLC39A6Q13433 755 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 HNRNPDQ14103 355 aaKnown RBP0.48□□□□□ -2.33
CEP290-203ENST00000547691 HIC1Q14526 733 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 PTPROQ16827 1216 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 DUSP6Q16828 381 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 CSPP1Q1MSJ5 1256 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 PROSER3Q2NL68 480 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 CDCA8Q53HL2 280 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 PPM1JQ5JR12 505 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 PRAMEF18Q5VWM3 479 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 LARP1BQ659C4 914 aaKnown RBP0.48□□□□□ -2.33
CEP290-203ENST00000547691 FBXL22Q6P050 247 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 ZC3H14Q6PJT7 736 aaKnown RBP0.48□□□□□ -2.33
CEP290-203ENST00000547691 LYPD8Q6UX82 237 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 CATSPERGQ6ZRH7 1159 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 TTLL7Q6ZT98 887 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 TTC6Q86TZ1 520 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 WDR5BQ86VZ2 330 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 GPR65Q8IYL9 337 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 SLC44A5Q8NCS7 719 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 RGS22Q8NE09 1264 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 VN1R2Q8NFZ6 395 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 TNFRSF25Q93038 417 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 NXPE3Q969Y0 559 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 MAML3Q96JK9 1138 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 FAM161BQ96MY7 647 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 SEMA3CQ99985 751 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 ASCC2Q9H1I8 757 aaPredicted RBP0.48□□□□□ -2.33
CEP290-203ENST00000547691 RIOX1Q9H6W3 641 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 TXNRD2Q9NNW7 524 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 ZSCAN32Q9NX65 697 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 PRKAG2Q9UGJ0 569 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 NR2E1Q9Y466 385 aa0.48□□□□□ -2.33
CEP290-203ENST00000547691 DENND4CQ5VZ89 1909 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 COL1A2P08123 1366 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 PLIN4Q96Q06 1357 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 LOC100289279A0A1B0GTE1 492 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 TEX51A0A1B0GUA7 166 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 GRXCR1A8MXD5 290 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 STXBP3O00186 592 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 IRS4O14654 1257 aaPredicted RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 MUSKO15146 869 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 PAPSS1O43252 624 aaPredicted RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 KCNQ3O43525 872 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 RNGTTO60942 597 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 KCNK5O95279 499 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 GJB5O95377 273 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 PSAPP07602 524 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 ZNF806P0C7X5 589 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 CYP2C8P10632 490 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 ATP2A2P16615 1042 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 ITIH2P19823 946 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 ACVRL1P37023 503 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 CRKP46108 304 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 CSRP3P50461 194 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 KLF10Q13118 480 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 GRM1Q13255 1194 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 FKBP5Q13451 457 aaPredicted RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 MTMR3Q13615 1198 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 RRP1BQ14684 758 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 DLGAP5Q15398 846 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 CCL14Q16627 93 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 SHROOM1Q2M3G4 852 aaPredicted RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 ZNF568Q3ZCX4 644 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 C4orf17Q53FE4 359 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 RSBN1Q5VWQ0 802 aaPredicted RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 KIAA1841Q6NSI8 718 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 ANKRD54Q6NXT1 300 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 NFRKBQ6P4R8 1299 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 KIF6Q6ZMV9 814 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 ARMCX2Q7L311 632 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 MRGPRGQ86SM5 289 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 PALM2Q8IXS6 379 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 CELF5Q8N6W0 485 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 MB21D1Q8N884 522 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 CCDC191Q8NCU4 936 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 GPRC5AQ8NFJ5 357 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 CAGE1Q8TC20 777 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 AFAP1L1Q8TED9 768 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 HDAC7Q8WUI4 952 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 MSANTD3Q96H12 275 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 EAF1Q96JC9 268 aaPredicted RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 ZNF594Q96JF6 807 aaPredicted RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 NECTIN4Q96NY8 510 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms