RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 TBC1D22BQ9NU19 505 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 PARP14Q460N5 1801 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 CCDC172P0C7W6 258 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 ZBTB48P10074 688 aaPredicted RBP16.88■□□□□ 0.29
BRF1-212ENST00000547562 KRT13P13646 458 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 PLS3P13797 630 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 EIF2AK2P19525 551 aaKnown RBP16.88■□□□□ 0.29
BRF1-212ENST00000547562 ACTN2P35609 894 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 GALCP54803 685 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 RPS6P62753 249 aaKnown RBP16.88■□□□□ 0.29
BRF1-212ENST00000547562 TNNC1P63316 161 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 GUCY2DQ02846 1103 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 SPP2Q13103 211 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 NNTQ13423 1086 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 TNFAIP1Q13829 316 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 ZSCAN26Q16670 478 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 INTS8Q75QN2 995 aaKnown RBP16.88■□□□□ 0.29
BRF1-212ENST00000547562 ACTRT1Q8TDG2 376 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 ACCSQ96QU6 501 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 TAAR1Q96RJ0 339 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 EPB41L5Q9HCM4 733 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 PPP1R9AQ9ULJ8 1098 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 WDR81Q562E7 1941 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 RFX1P22670 979 aa16.87■□□□□ 0.29
BRF1-212ENST00000547562 YWHABP31946 246 aaKnown RBP16.87■□□□□ 0.29
BRF1-212ENST00000547562 CARSP49589 748 aaKnown RBP16.87■□□□□ 0.29
BRF1-212ENST00000547562 PGM5Q15124 567 aa16.87■□□□□ 0.29
BRF1-212ENST00000547562 PHLDB3Q6NSJ2 640 aa16.87■□□□□ 0.29
BRF1-212ENST00000547562 PEX26Q7Z412 305 aa16.87■□□□□ 0.29
BRF1-212ENST00000547562 C12orf56Q8IXR9 622 aa16.87■□□□□ 0.29
BRF1-212ENST00000547562 SYCE1Q8N0S2 351 aa16.87■□□□□ 0.29
BRF1-212ENST00000547562 LMO3Q8TAP4 145 aa16.87■□□□□ 0.29
BRF1-212ENST00000547562 GINM1Q9NU53 330 aa16.87■□□□□ 0.29
BRF1-212ENST00000547562 ZSCAN5CA6NGD5 496 aaPredicted RBP16.87■□□□□ 0.29
BRF1-212ENST00000547562 PAK2Q13177 524 aa16.87■□□□□ 0.29
BRF1-212ENST00000547562 TSEN2Q8NCE0 465 aaKnown RBP16.87■□□□□ 0.29
BRF1-212ENST00000547562 PCIF1Q9H4Z3 704 aa16.87■□□□□ 0.29
BRF1-212ENST00000547562 SUCLA2Q9P2R7 463 aaPredicted RBP16.87■□□□□ 0.29
BRF1-212ENST00000547562 STXBP5LQ9Y2K9 1186 aa16.87■□□□□ 0.29
BRF1-212ENST00000547562 NCANO14594 1321 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 ASTN2O75129 1339 aaPredicted RBP16.86■□□□□ 0.29
BRF1-212ENST00000547562 TISP43B9A030 160 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 CEP104O60308 925 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 CTNND1O60716 968 aaKnown RBP16.86■□□□□ 0.29
BRF1-212ENST00000547562 EGFRP00533 1210 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 VCAM1P19320 739 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 DLG4P78352 724 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 PTPROQ16827 1216 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 DAAM2Q86T65 1068 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 METTL13Q8N6R0 699 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 NFU1Q9UMS0 254 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 EMSYQ7Z589 1322 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 ESYT3A0FGR9 886 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 TMEM253P0C7T8 217 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 UGCGQ16739 394 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 ALS2CLQ60I27 953 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 LEKR1Q6ZMV7 388 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.86■□□□□ 0.29
BRF1-212ENST00000547562 NT5DC3Q86UY8 548 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 C4orf19Q8IY42 314 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 SCFD2Q8WU76 684 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 JDP2Q8WYK2 163 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 CCDC43Q96MW1 224 aaKnown RBP16.86■□□□□ 0.29
BRF1-212ENST00000547562 SH3GL2Q99962 352 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 CBWD1Q9BRT8 395 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 TIPINQ9BVW5 301 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 ST6GALNAC4Q9H4F1 302 aa16.86■□□□□ 0.29
BRF1-212ENST00000547562 TMCO5BA8MYB1 307 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 PGRMC1O00264 195 aaKnown RBP16.85■□□□□ 0.29
BRF1-212ENST00000547562 RAD51CO43502 376 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 VAMP7P51809 220 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 ZNF280AP59817 542 aaPredicted RBP16.85■□□□□ 0.29
BRF1-212ENST00000547562 GTF2BQ00403 316 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 MTMR2Q13614 643 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 KIF22Q14807 665 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 ARHGAP44Q17R89 818 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 HAUS6Q7Z4H7 955 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 KLHL7Q8IXQ5 586 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 IFT81Q8WYA0 676 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 RFFLQ8WZ73 363 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 CALR3Q96L12 384 aaKnown RBP16.85■□□□□ 0.29
BRF1-212ENST00000547562 RMDN3Q96TC7 470 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 SH2D3AQ9BRG2 576 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 PLEKHA4Q9H4M7 779 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 PIM2Q9P1W9 311 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 TMEM150BA6NC51 233 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 P4HA2O15460 535 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 MYCLP12524 364 aaPredicted RBP16.85■□□□□ 0.29
BRF1-212ENST00000547562 CETN1Q12798 172 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 XXYLT1Q8NBI6 393 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 SLC35G2Q8TBE7 412 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 CASKIN2Q8WXE0 1202 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 HES6Q96HZ4 224 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 TRERF1Q96PN7 1200 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.85■□□□□ 0.292e-6■■□□□ 11.6
BRF1-212ENST00000547562 PDCD2LQ9BRP1 358 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 TAOK3Q9H2K8 898 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 RPAP3Q9H6T3 665 aaPredicted RBP16.85■□□□□ 0.29
BRF1-212ENST00000547562 OSGEPQ9NPF4 335 aa16.85■□□□□ 0.29
BRF1-212ENST00000547562 PXMP2Q9NR77 195 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms