RNA–Protein interactions for RNA: ENST00000547515.1

LINC02409-201, Transcript of long intergenic non-protein coding RNA 2409, humanhuman

TSL 4 BASIC

Gene LINC02409, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02409-201ENST00000547515 MXD4Q14582 209 aaPredicted RBP11.41□□□□□ -0.58
LINC02409-201ENST00000547515 GRIN2CQ14957 1233 aa11.41□□□□□ -0.58
LINC02409-201ENST00000547515 FAM173BQ6P4H8 233 aa11.41□□□□□ -0.58
LINC02409-201ENST00000547515 PADI6Q6TGC4 694 aa11.41□□□□□ -0.58
LINC02409-201ENST00000547515 SRGAP1Q7Z6B7 1085 aa11.41□□□□□ -0.58
LINC02409-201ENST00000547515 NPAS4Q8IUM7 802 aa11.41□□□□□ -0.58
LINC02409-201ENST00000547515 MCPH1Q8NEM0 835 aa11.41□□□□□ -0.58
LINC02409-201ENST00000547515 NLRP4Q96MN2 994 aa11.41□□□□□ -0.58
LINC02409-201ENST00000547515 CDX2Q99626 313 aaPredicted RBP11.41□□□□□ -0.58
LINC02409-201ENST00000547515 ADAM2Q99965 735 aa11.41□□□□□ -0.58
LINC02409-201ENST00000547515 RC3H2Q9HBD1 1191 aaKnown RBP11.41□□□□□ -0.58
LINC02409-201ENST00000547515 IFT122Q9HBG6 1241 aa11.41□□□□□ -0.58
LINC02409-201ENST00000547515 DDX19AQ9NUU7 478 aaKnown RBP11.41□□□□□ -0.58
LINC02409-201ENST00000547515 CLIC4Q9Y696 253 aa11.41□□□□□ -0.58
LINC02409-201ENST00000547515 MORC2Q9Y6X9 1032 aaPredicted RBP11.41□□□□□ -0.58
LINC02409-201ENST00000547515 TRANK1O15050 2925 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 CITO14578 2027 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 LINC01553A4QN01 128 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 DGKIO75912 1065 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 UPP2O95045 317 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 EYA4O95677 639 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 STAG3L1P0CL83 205 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 SRGAP2CP0DJJ0 459 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 CYP11B2P19099 503 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 FGFR4P22455 802 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 SFPQP23246 707 aaKnown RBP eCLIP11.4□□□□□ -0.58
LINC02409-201ENST00000547515 GLRA2P23416 452 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 LONP1P36776 959 aaKnown RBP11.4□□□□□ -0.58
LINC02409-201ENST00000547515 PTENP60484 403 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 FAM189BP81408 668 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 SLC24A5Q71RS6 500 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 IFNLR1Q8IU57 520 aaPredicted RBP11.4□□□□□ -0.58
LINC02409-201ENST00000547515 ASAP3Q8TDY4 903 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 ZNF689Q96CS4 500 aaPredicted RBP11.4□□□□□ -0.58
LINC02409-201ENST00000547515 PNMA5Q96PV4 448 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 USP28Q96RU2 1077 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 YME1L1Q96TA2 773 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 POLR3FQ9H1D9 316 aaPredicted RBP11.4□□□□□ -0.58
LINC02409-201ENST00000547515 BHMT2Q9H2M3 363 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 CHST12Q9NRB3 414 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 DNM3Q9UQ16 869 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 STXBP5LQ9Y2K9 1186 aa11.4□□□□□ -0.58
LINC02409-201ENST00000547515 PLXNA4Q9HCM2 1894 aa11.4□□□□□ -0.59
LINC02409-201ENST00000547515 DENND3A2RUS2 1198 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 E9PMD0 336 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 CSDE1O75534 798 aaKnown RBP11.39□□□□□ -0.59
LINC02409-201ENST00000547515 ZSCAN22P10073 491 aaPredicted RBP11.39□□□□□ -0.59
LINC02409-201ENST00000547515 ZSCAN20P17040 1043 aaPredicted RBP11.39□□□□□ -0.59
LINC02409-201ENST00000547515 PHKA2P46019 1235 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 ERVK-21P61565 698 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 GRIN1Q05586 938 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 GRB10Q13322 594 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 CAPSQ13938 189 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 TFDP1Q14186 410 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 PCBP1Q15365 356 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINC02409-201ENST00000547515 TMEM119Q4V9L6 283 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 KCNK18Q7Z418 384 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 RNF149Q8NC42 400 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 SPRYD3Q8NCJ5 442 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 MYLIPQ8WY64 445 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 TGS1Q96RS0 853 aaKnown RBP11.39□□□□□ -0.59
LINC02409-201ENST00000547515 TRAIPQ9BWF2 469 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 NFKBIZQ9BYH8 718 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 NT5C3AQ9H0P0 336 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 PRDM12Q9H4Q4 367 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 ELAC1Q9H777 363 aaKnown RBP11.39□□□□□ -0.59
LINC02409-201ENST00000547515 MINDY3Q9H8M7 445 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 GPRC5CQ9NQ84 441 aa11.39□□□□□ -0.59
LINC02409-201ENST00000547515 FBXO2Q9UK22 296 aaPredicted RBP11.39□□□□□ -0.59
LINC02409-201ENST00000547515 ADGRA3Q8IWK6 1321 aa11.38□□□□□ -0.59
LINC02409-201ENST00000547515 F13A1P00488 732 aa11.38□□□□□ -0.59
LINC02409-201ENST00000547515 NASPP49321 788 aaPredicted RBP11.38□□□□□ -0.59
LINC02409-201ENST00000547515 SLC39A14Q15043 492 aa11.38□□□□□ -0.59
LINC02409-201ENST00000547515 CATSPER4Q7RTX7 472 aa11.38□□□□□ -0.59
LINC02409-201ENST00000547515 SPRED2Q7Z698 418 aa11.38□□□□□ -0.59
LINC02409-201ENST00000547515 CABP7Q86V35 215 aa11.38□□□□□ -0.59
LINC02409-201ENST00000547515 CMTR2Q8IYT2 770 aaKnown RBP11.38□□□□□ -0.59
LINC02409-201ENST00000547515 SAMD11Q96NU1 681 aa11.38□□□□□ -0.59
LINC02409-201ENST00000547515 CCSER1Q9C0I3 900 aa11.38□□□□□ -0.59
LINC02409-201ENST00000547515 AGPAT5Q9NUQ2 364 aa11.38□□□□□ -0.59
LINC02409-201ENST00000547515 TMEM161AQ9NX61 479 aa11.38□□□□□ -0.59
LINC02409-201ENST00000547515 DACT1Q9NYF0 836 aa11.38□□□□□ -0.59
LINC02409-201ENST00000547515 LRFN2Q9ULH4 789 aa11.38□□□□□ -0.59
LINC02409-201ENST00000547515 PCDHB7Q9Y5E2 793 aa11.38□□□□□ -0.59
LINC02409-201ENST00000547515 SRPRBQ9Y5M8 271 aaKnown RBP11.38□□□□□ -0.59
LINC02409-201ENST00000547515 A0A0U1RQF3 1178 aa11.37□□□□□ -0.59
LINC02409-201ENST00000547515 EPOPA6NHQ4 379 aa11.37□□□□□ -0.59
LINC02409-201ENST00000547515 LINC00271P0C7V0 271 aa11.37□□□□□ -0.59
LINC02409-201ENST00000547515 FOSL2P15408 326 aa11.37□□□□□ -0.59
LINC02409-201ENST00000547515 MARCKSP29966 332 aaPredicted RBP11.37□□□□□ -0.59
LINC02409-201ENST00000547515 UBA7P41226 1012 aa11.37□□□□□ -0.59
LINC02409-201ENST00000547515 CEBPZQ03701 1054 aaKnown RBP11.37□□□□□ -0.59
LINC02409-201ENST00000547515 MBTD1Q05BQ5 628 aa11.37□□□□□ -0.59
LINC02409-201ENST00000547515 PKP1Q13835 747 aa11.37□□□□□ -0.59
LINC02409-201ENST00000547515 ADGRE1Q14246 886 aa11.37□□□□□ -0.59
LINC02409-201ENST00000547515 BECN1Q14457 450 aa11.37□□□□□ -0.59
LINC02409-201ENST00000547515 ZRSR1Q15695 479 aaKnown RBP11.37□□□□□ -0.59
LINC02409-201ENST00000547515 FAM102BQ5T8I3 360 aa11.37□□□□□ -0.59
LINC02409-201ENST00000547515 CDCA2Q69YH5 1023 aaPredicted RBP11.37□□□□□ -0.59
LINC02409-201ENST00000547515 RINT1Q6NUQ1 792 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms