RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 CCDC73Q6ZRK6 1079 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 EP400NLQ6ZTU2 488 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 USP49Q70CQ1 688 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 GLG1Q92896 1179 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 CLP1Q92989 425 aaKnown RBP13.45□□□□□ -0.26
HDAC7-226ENST00000547259 LXNQ9BS40 222 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 MMTAG2Q9BU76 263 aaKnown RBP13.45□□□□□ -0.26
HDAC7-226ENST00000547259 POLR3CQ9BUI4 534 aaPredicted RBP13.45□□□□□ -0.26
HDAC7-226ENST00000547259 CCSER1Q9C0I3 900 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 RGL1Q9NZL6 768 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 TUBE1Q9UJT0 475 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 ADGRA3Q8IWK6 1321 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 IGKV6D-21A0A0A0MT36 114 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 A0A1B0GVL5 298 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 DDX11L8A8MPP1 907 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 M0QZ92 97 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 SLC26A4O43511 780 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 DCXO43602 365 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 DKC1O60832 514 aaKnown RBP eCLIP13.44□□□□□ -0.26
HDAC7-226ENST00000547259 CHRNA1P02708 482 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 IL9P15248 144 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 PFKFB1P16118 471 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 RPA1P27694 616 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 MCM4P33991 863 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 QARSP47897 775 aaKnown RBP13.44□□□□□ -0.26
HDAC7-226ENST00000547259 STAT5BP51692 787 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 PSMC5P62195 406 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 BTG3Q14201 252 aaPredicted RBP13.44□□□□□ -0.26
HDAC7-226ENST00000547259 KARSQ15046 597 aaKnown RBP13.44□□□□□ -0.26
HDAC7-226ENST00000547259 UGCGQ16739 394 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 PDXDC2PQ6P474 469 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 POTEGQ6S5H5 508 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 TSHZ1Q6ZSZ6 1077 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 CATSPER3Q86XQ3 398 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 TRIM50Q86XT4 487 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 TPH2Q8IWU9 490 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 P2RX5Q93086 422 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 PLIN2Q99541 437 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 NT5C3AQ9H0P0 336 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 ZSWIM4Q9H7M6 989 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 CD320Q9NPF0 282 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 LMBRD1Q9NUN5 540 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 CLDND1Q9NY35 253 aa13.44□□□□□ -0.26
HDAC7-226ENST00000547259 MBLAC1A4D2B0 266 aaPredicted RBP13.43□□□□□ -0.26
HDAC7-226ENST00000547259 H3BQ06 376 aaPredicted RBP13.43□□□□□ -0.26
HDAC7-226ENST00000547259 ENPP3O14638 875 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 SLITRK3O94933 977 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 STAG3L1P0CL83 205 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 SPATA31C1P0DKV0 1188 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 GHRP10912 638 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 PLCG1P19174 1290 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 PRKCEQ02156 737 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 GRIK4Q16099 956 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 ODR4Q5SWX8 454 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 ADHFE1Q8IWW8 467 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 CKAP2LQ8IYA6 745 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 PDILTQ8N807 584 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 KHSRPQ92945 711 aaKnown RBP eCLIP13.43□□□□□ -0.26
HDAC7-226ENST00000547259 CCDC43Q96MW1 224 aaKnown RBP13.43□□□□□ -0.26
HDAC7-226ENST00000547259 PNMA5Q96PV4 448 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 PCYT2Q99447 389 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 HSD17B14Q9BPX1 270 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 GOLPH3LQ9H4A5 285 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 C11orf16Q9NQ32 467 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 DDX19AQ9NUU7 478 aaKnown RBP13.43□□□□□ -0.26
HDAC7-226ENST00000547259 KIAA1024Q9UPX6 916 aa13.43□□□□□ -0.26
HDAC7-226ENST00000547259 FSD2A1L4K1 749 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 FAM86C2PA6NEL3 165 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 OATP04181 439 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 PTMSP20962 102 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 MUTP22033 750 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 MARK3P27448 753 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 STAT6P42226 847 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 SLC26A2P50443 739 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 NDUFA8P51970 172 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 MGAT3Q09327 533 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 LPIN1Q14693 890 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 ECM1Q16610 540 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 TMEM119Q4V9L6 283 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 FBXO47Q5MNV8 452 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 HYIQ5T013 277 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 RRAGBQ5VZM2 374 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 PLPPR4Q7Z2D5 763 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 TRMT1LQ7Z2T5 733 aaKnown RBP13.42□□□□□ -0.26
HDAC7-226ENST00000547259 NME8Q8N427 588 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 DHX58Q96C10 678 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 PYM1Q9BRP8 204 aaKnown RBP13.42□□□□□ -0.26
HDAC7-226ENST00000547259 PANK2Q9BZ23 570 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 WRAP73Q9P2S5 460 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-226ENST00000547259 SEPT9Q9UHD8 586 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-226ENST00000547259 KCNH3Q9ULD8 1083 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 HPSEQ9Y251 543 aa13.42□□□□□ -0.26
HDAC7-226ENST00000547259 MAFBQ9Y5Q3 323 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-226ENST00000547259 A0A087X0B3 334 aa13.41□□□□□ -0.26
HDAC7-226ENST00000547259 FAM237AA0A1B0GTK4 181 aa13.41□□□□□ -0.26
HDAC7-226ENST00000547259 C19orf67A6NJJ6 358 aa13.41□□□□□ -0.26
HDAC7-226ENST00000547259 POLR2DO15514 142 aaKnown RBP13.41□□□□□ -0.26
HDAC7-226ENST00000547259 ZNF862O60290 1169 aa13.41□□□□□ -0.26
HDAC7-226ENST00000547259 DGKIO75912 1065 aa13.41□□□□□ -0.26
HDAC7-226ENST00000547259 SYKP43405 635 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms