RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 LRWD1Q9UFC0 647 aa17.71■□□□□ 0.43
DDX54-204ENST00000546898 DBR1Q9UK59 544 aaKnown RBP17.71■□□□□ 0.43
DDX54-204ENST00000546898 A0A0C4DFX4 3053 aa17.71■□□□□ 0.43
DDX54-204ENST00000546898 C5orf67F2Z3F1 127 aa17.7■□□□□ 0.42
DDX54-204ENST00000546898 HOXA2O43364 376 aa17.7■□□□□ 0.42
DDX54-204ENST00000546898 RB1P06400 928 aa17.7■□□□□ 0.42
DDX54-204ENST00000546898 LINC00271P0C7V0 271 aa17.7■□□□□ 0.42
DDX54-204ENST00000546898 LAMTOR4Q0VGL1 99 aa17.7■□□□□ 0.42
DDX54-204ENST00000546898 MXD4Q14582 209 aaPredicted RBP17.7■□□□□ 0.42
DDX54-204ENST00000546898 BRAPQ7Z569 592 aa17.7■□□□□ 0.42
DDX54-204ENST00000546898 SRGAP1Q7Z6B7 1085 aa17.7■□□□□ 0.42
DDX54-204ENST00000546898 FERMT3Q86UX7 667 aa17.7■□□□□ 0.42
DDX54-204ENST00000546898 KSR1Q8IVT5 923 aa17.7■□□□□ 0.42
DDX54-204ENST00000546898 PIGOQ8TEQ8 1089 aa17.7■□□□□ 0.42
DDX54-204ENST00000546898 IFT122Q9HBG6 1241 aa17.7■□□□□ 0.42
DDX54-204ENST00000546898 H3BNC9 293 aa17.69■□□□□ 0.42
DDX54-204ENST00000546898 K7ELQ4 463 aaPredicted RBP17.69■□□□□ 0.42
DDX54-204ENST00000546898 FGFR4P22455 802 aa17.69■□□□□ 0.42
DDX54-204ENST00000546898 CTNNB1P35222 781 aa17.69■□□□□ 0.42
DDX54-204ENST00000546898 BMPR1AP36894 532 aa17.69■□□□□ 0.42
DDX54-204ENST00000546898 ATP2C1P98194 919 aaPredicted RBP17.69■□□□□ 0.42
DDX54-204ENST00000546898 PCBP1Q15365 356 aaKnown RBP eCLIP17.69■□□□□ 0.42
DDX54-204ENST00000546898 POTEGQ6S5H5 508 aa17.69■□□□□ 0.42
DDX54-204ENST00000546898 MICALL1Q8N3F8 863 aa17.69■□□□□ 0.42
DDX54-204ENST00000546898 PPM1EQ8WY54 764 aa17.69■□□□□ 0.42
DDX54-204ENST00000546898 C11orf84Q9BUA3 381 aaPredicted RBP17.69■□□□□ 0.42
DDX54-204ENST00000546898 TRAIPQ9BWF2 469 aa17.69■□□□□ 0.42
DDX54-204ENST00000546898 PLVAPQ9BX97 442 aa17.69■□□□□ 0.42
DDX54-204ENST00000546898 EYSQ5T1H1 3165 aa17.69■□□□□ 0.42
DDX54-204ENST00000546898 USO1O60763 962 aaKnown RBP17.68■□□□□ 0.42
DDX54-204ENST00000546898 IBSPP21815 317 aaPredicted RBP17.68■□□□□ 0.42
DDX54-204ENST00000546898 CCT6AP40227 531 aaKnown RBP17.68■□□□□ 0.42
DDX54-204ENST00000546898 PHKA2P46019 1235 aa17.68■□□□□ 0.42
DDX54-204ENST00000546898 POU5F1BQ06416 359 aa17.68■□□□□ 0.42
DDX54-204ENST00000546898 GPM6BQ13491 265 aa17.68■□□□□ 0.42
DDX54-204ENST00000546898 TFDP1Q14186 410 aa17.68■□□□□ 0.42
DDX54-204ENST00000546898 CCDC85BQ15834 202 aaPredicted RBP17.68■□□□□ 0.42
DDX54-204ENST00000546898 PTPROQ16827 1216 aa17.68■□□□□ 0.42
DDX54-204ENST00000546898 DTHD1Q6ZMT9 781 aa17.68■□□□□ 0.42
DDX54-204ENST00000546898 CATSPER4Q7RTX7 472 aa17.68■□□□□ 0.42
DDX54-204ENST00000546898 MCPH1Q8NEM0 835 aa17.68■□□□□ 0.42
DDX54-204ENST00000546898 MRPL42Q9Y6G3 142 aaKnown RBP17.68■□□□□ 0.42
DDX54-204ENST00000546898 A0A0U1RQF3 1178 aa17.67■□□□□ 0.42
DDX54-204ENST00000546898 CSDE1O75534 798 aaKnown RBP17.67■□□□□ 0.42
DDX54-204ENST00000546898 SRGAP2CP0DJJ0 459 aa17.67■□□□□ 0.42
DDX54-204ENST00000546898 RAB27AP51159 221 aa17.67■□□□□ 0.42
DDX54-204ENST00000546898 PAN2Q504Q3 1202 aaKnown RBP17.67■□□□□ 0.42
DDX54-204ENST00000546898 NAALADL2Q58DX5 795 aa17.67■□□□□ 0.42
DDX54-204ENST00000546898 ARL6IP4Q66PJ3 421 aaKnown RBP17.67■□□□□ 0.42
DDX54-204ENST00000546898 ECHDC2Q86YB7 292 aa17.67■□□□□ 0.42
DDX54-204ENST00000546898 IFNLR1Q8IU57 520 aaPredicted RBP17.67■□□□□ 0.42
DDX54-204ENST00000546898 RNF149Q8NC42 400 aa17.67■□□□□ 0.42
DDX54-204ENST00000546898 SNX29Q8TEQ0 813 aa17.67■□□□□ 0.42
DDX54-204ENST00000546898 RSPH1Q8WYR4 309 aa17.67■□□□□ 0.42
DDX54-204ENST00000546898 P2RX5Q93086 422 aa17.67■□□□□ 0.42
DDX54-204ENST00000546898 SNX21Q969T3 373 aa17.67■□□□□ 0.42
DDX54-204ENST00000546898 LMAN2LQ9H0V9 348 aa17.67■□□□□ 0.42
DDX54-204ENST00000546898 AGPAT5Q9NUQ2 364 aa17.67■□□□□ 0.42
DDX54-204ENST00000546898 THEGQ9P2T0 379 aa17.67■□□□□ 0.42
DDX54-204ENST00000546898 PIN4Q9Y237 131 aaKnown RBP17.67■□□□□ 0.42
DDX54-204ENST00000546898 BRWD1Q9NSI6 2320 aa17.67■□□□□ 0.42
DDX54-204ENST00000546898 CUL9Q8IWT3 2517 aa17.67■□□□□ 0.42
DDX54-204ENST00000546898 PLXNA4Q9HCM2 1894 aa17.67■□□□□ 0.42
DDX54-204ENST00000546898 MYH15Q9Y2K3 1946 aa17.66■□□□□ 0.42
DDX54-204ENST00000546898 VPS37CA5D8V6 355 aaPredicted RBP17.66■□□□□ 0.42
DDX54-204ENST00000546898 TBKBP1A7MCY6 615 aa17.66■□□□□ 0.42
DDX54-204ENST00000546898 EOMESO95936 686 aa17.66■□□□□ 0.42
DDX54-204ENST00000546898 BMP15O95972 392 aa17.66■□□□□ 0.42
DDX54-204ENST00000546898 SKIP12755 728 aa17.66■□□□□ 0.42
DDX54-204ENST00000546898 ARL2P36404 184 aa17.66■□□□□ 0.42
DDX54-204ENST00000546898 GATMP50440 423 aa17.66■□□□□ 0.42
DDX54-204ENST00000546898 TIGD5Q53EQ6 642 aa17.66■□□□□ 0.42
DDX54-204ENST00000546898 FAM102BQ5T8I3 360 aa17.66■□□□□ 0.42
DDX54-204ENST00000546898 KRT79Q5XKE5 535 aa17.66■□□□□ 0.42
DDX54-204ENST00000546898 TWF2Q6IBS0 349 aaKnown RBP17.66■□□□□ 0.42
DDX54-204ENST00000546898 MRPL38Q96DV4 380 aaKnown RBP17.66■□□□□ 0.42
DDX54-204ENST00000546898 NFKBIZQ9BYH8 718 aa17.66■□□□□ 0.42
DDX54-204ENST00000546898 TMEM117Q9H0C3 514 aa17.66■□□□□ 0.42
DDX54-204ENST00000546898 POLR3FQ9H1D9 316 aaPredicted RBP17.66■□□□□ 0.42
DDX54-204ENST00000546898 ARHGEF35A5YM69 484 aa17.65■□□□□ 0.42
DDX54-204ENST00000546898 FGFR1P11362 822 aa17.65■□□□□ 0.42
DDX54-204ENST00000546898 PTENP60484 403 aa17.65■□□□□ 0.42
DDX54-204ENST00000546898 CAPSQ13938 189 aa17.65■□□□□ 0.42
DDX54-204ENST00000546898 ZNF598Q86UK7 904 aaKnown RBP17.65■□□□□ 0.42
DDX54-204ENST00000546898 ABI1Q8IZP0 508 aa17.65■□□□□ 0.42
DDX54-204ENST00000546898 KCTD17Q8N5Z5 321 aa17.65■□□□□ 0.42
DDX54-204ENST00000546898 ASAP3Q8TDY4 903 aa17.65■□□□□ 0.42
DDX54-204ENST00000546898 MINDY3Q9H8M7 445 aa17.65■□□□□ 0.42
DDX54-204ENST00000546898 AAASQ9NRG9 546 aa17.65■□□□□ 0.42
DDX54-204ENST00000546898 UNC80Q8N2C7 3258 aa17.65■□□□□ 0.42
DDX54-204ENST00000546898 MYH11P35749 1972 aa17.64■□□□□ 0.41
DDX54-204ENST00000546898 A0A087WWV3 80 aa17.64■□□□□ 0.41
DDX54-204ENST00000546898 ERLIN2O94905 339 aa17.64■□□□□ 0.41
DDX54-204ENST00000546898 ATF7P17544 494 aaPredicted RBP17.64■□□□□ 0.41
DDX54-204ENST00000546898 GLRA2P23416 452 aa17.64■□□□□ 0.41
DDX54-204ENST00000546898 AXLP30530 894 aa17.64■□□□□ 0.41
DDX54-204ENST00000546898 IL17AQ16552 155 aa17.64■□□□□ 0.41
DDX54-204ENST00000546898 ECM1Q16610 540 aa17.64■□□□□ 0.41
DDX54-204ENST00000546898 PADI6Q6TGC4 694 aa17.64■□□□□ 0.41
DDX54-204ENST00000546898 LRRC43Q8N309 656 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms