RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 DEPTORQ8TB45 409 aa13.65□□□□□ -0.22
PTCH1-212ENST00000546744 SERPINB12Q96P63 405 aa13.65□□□□□ -0.22
PTCH1-212ENST00000546744 CCSER1Q9C0I3 900 aa13.65□□□□□ -0.22
PTCH1-212ENST00000546744 PALMDQ9NP74 551 aa13.65□□□□□ -0.22
PTCH1-212ENST00000546744 NCAPD2Q15021 1401 aa13.65□□□□□ -0.22
PTCH1-212ENST00000546744 KIF1AQ12756 1690 aa13.65□□□□□ -0.22
PTCH1-212ENST00000546744 A6NJR5 290 aa13.65□□□□□ -0.22
PTCH1-212ENST00000546744 SPAG6O75602 509 aa13.65□□□□□ -0.22
PTCH1-212ENST00000546744 CUL4BQ13620 913 aa13.65□□□□□ -0.22
PTCH1-212ENST00000546744 PREPLQ4J6C6 727 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-212ENST00000546744 KAZNQ674X7 775 aa13.65□□□□□ -0.22
PTCH1-212ENST00000546744 CCDC137Q6PK04 289 aaKnown RBP13.65□□□□□ -0.22
PTCH1-212ENST00000546744 RFX6Q8HWS3 928 aa13.65□□□□□ -0.22
PTCH1-212ENST00000546744 NOA1Q8NC60 698 aaKnown RBP13.65□□□□□ -0.22
PTCH1-212ENST00000546744 RNF169Q8NCN4 708 aa13.65□□□□□ -0.22
PTCH1-212ENST00000546744 DPF2Q92785 391 aa13.65□□□□□ -0.22
PTCH1-212ENST00000546744 HDAC11Q96DB2 347 aa13.65□□□□□ -0.22
PTCH1-212ENST00000546744 ZSWIM5Q9P217 1185 aa13.65□□□□□ -0.22
PTCH1-212ENST00000546744 SEL1LQ9UBV2 794 aa13.65□□□□□ -0.22
PTCH1-212ENST00000546744 WARS2Q9UGM6 360 aaKnown RBP13.65□□□□□ -0.22
PTCH1-212ENST00000546744 CFAP69A5D8W1 941 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 E9PMD0 336 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 CYP27B1O15528 508 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 HSPA4LO95757 839 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 BASP1P80723 227 aaKnown RBP13.64□□□□□ -0.23
PTCH1-212ENST00000546744 MTF1Q14872 753 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 TBC1D9BQ66K14 1250 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 MB21D2Q8IYB1 491 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-212ENST00000546744 CATSPER2Q96P56 530 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 PARVGQ9HBI0 331 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 UBN1Q9NPG3 1134 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 ATP2C1P98194 919 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-212ENST00000546744 PTPN21Q16825 1174 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 TAF1BQ53T94 588 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-212ENST00000546744 ENOSF1Q7L5Y1 443 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 CD248Q9HCU0 757 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 GID8Q9NWU2 228 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 ETAA1Q9NY74 926 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 NUB1Q9Y5A7 615 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 M0R2C6 588 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 IGF2BP3O00425 579 aaKnown RBP eCLIP13.64□□□□□ -0.23
PTCH1-212ENST00000546744 PTPN12Q05209 780 aaKnown RBP13.64□□□□□ -0.23
PTCH1-212ENST00000546744 CEP55Q53EZ4 464 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 TTBK2Q6IQ55 1244 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 TRIM72Q6ZMU5 477 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 LONP2Q86WA8 852 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 CCDC117Q8IWD4 279 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-212ENST00000546744 MTBPQ96DY7 904 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 BTBD6Q96KE9 485 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 CACYBPQ9HB71 228 aaKnown RBP13.64□□□□□ -0.23
PTCH1-212ENST00000546744 CYP26B1Q9NR63 512 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 RGL1Q9NZL6 768 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 LRCH1Q9Y2L9 728 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 ABLIM1O14639 778 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 MAP2K7O14733 419 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 ASAP2O43150 1006 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 DAB1O75553 588 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 KRT8P05787 483 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 PLA2G4BP0C869 781 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 SLC1A1P43005 524 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 SURF1Q15526 300 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 NAALADL2Q58DX5 795 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 FAM47AQ5JRC9 791 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 ARHGAP22Q7Z5H3 698 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 SLC26A7Q8TE54 656 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 ACSBG1Q96GR2 724 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 PKD2L2Q9NZM6 624 aa13.64□□□□□ -0.23
PTCH1-212ENST00000546744 PHF2O75151 1096 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 ARHGDIAP52565 204 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 ICA1Q05084 483 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 KRR1Q13601 381 aaKnown RBP13.63□□□□□ -0.23
PTCH1-212ENST00000546744 ZBTB8OSQ8IWT0 167 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 CMTR1Q8N1G2 835 aaKnown RBP13.63□□□□□ -0.23
PTCH1-212ENST00000546744 TBCKQ8TEA7 893 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 RNF34Q969K3 372 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 KRT14P02533 472 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 GFPT1Q06210 699 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-212ENST00000546744 ADCY1Q08828 1119 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 WASHC2DQ5SRD0 308 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 CYFIP1Q7L576 1253 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 ATL2Q8NHH9 583 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 DHX38Q92620 1227 aaKnown RBP13.63□□□□□ -0.23
PTCH1-212ENST00000546744 GPKOWQ92917 476 aaPredicted RBP eCLIP13.63□□□□□ -0.23
PTCH1-212ENST00000546744 OPTNQ96CV9 577 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 ERP27Q96DN0 273 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 IRX2Q9BZI1 471 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-212ENST00000546744 NRKQ7Z2Y5 1582 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 RNF103-CHMP3A0A140T963 221 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 PHF20L1A8MW92 1017 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 AHCYL1O43865 530 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 YY1P25490 414 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 SPDYCQ5MJ68 293 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 BSPRYQ5W0U4 402 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 FRMD5Q7Z6J6 570 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 TRIM59Q8IWR1 403 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 KIAA2013Q8IYS2 634 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 MIEF2Q96C03 454 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 PRMT1Q99873 361 aaKnown RBP13.63□□□□□ -0.23
PTCH1-212ENST00000546744 AMNQ9BXJ7 453 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 GINM1Q9NU53 330 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms