RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 PARD6BQ9BYG5 372 aa11.17□□□□□ -0.62
SSH1-203ENST00000546433 PIDD1Q9HB75 910 aa11.17□□□□□ -0.62
SSH1-203ENST00000546433 NOC2LQ9Y3T9 749 aaKnown RBP11.17□□□□□ -0.62
SSH1-203ENST00000546433 SPDYE2BA6NHP3 402 aa11.17□□□□□ -0.62
SSH1-203ENST00000546433 LGALS16A8MUM7 142 aa11.17□□□□□ -0.62
SSH1-203ENST00000546433 SPDYE6P0CI01 402 aa11.17□□□□□ -0.62
SSH1-203ENST00000546433 LIG3P49916 1009 aa11.17□□□□□ -0.62
SSH1-203ENST00000546433 SF3A3Q12874 501 aaKnown RBP eCLIP11.17□□□□□ -0.62
SSH1-203ENST00000546433 TMED2Q15363 201 aa11.17□□□□□ -0.62
SSH1-203ENST00000546433 MTERF2Q49AM1 385 aa11.17□□□□□ -0.62
SSH1-203ENST00000546433 HSP90AA5PQ58FG0 334 aa11.17□□□□□ -0.62
SSH1-203ENST00000546433 FAM20AQ96MK3 541 aa11.17□□□□□ -0.62
SSH1-203ENST00000546433 APOL6Q9BWW8 343 aa11.17□□□□□ -0.62
SSH1-203ENST00000546433 LRRC4Q9HBW1 653 aa11.17□□□□□ -0.62
SSH1-203ENST00000546433 SYNJ2BP-COX16A0A087WUM0 186 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 F8W8V4 182 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 GOLGA8SH3BPF8 625 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 PLEKHA8P1O95397 391 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 DDIT3P35638 169 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 COG7P83436 770 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 ALKBH5Q6P6C2 394 aaKnown RBP11.16□□□□□ -0.62
SSH1-203ENST00000546433 MCPH1Q8NEM0 835 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 RNF208Q9H0X6 261 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 COX16Q9P0S2 106 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 SYNGAP1Q96PV0 1343 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 IQANK1A0A1B0GTG1 560 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 PDHXO00330 501 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 RASGRF2O14827 1237 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 SEC31AO94979 1220 aaKnown RBP11.16□□□□□ -0.62
SSH1-203ENST00000546433 CLTAP09496 248 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 PDXDC2PQ6P474 469 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 CENPUQ71F23 418 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 EEF2KMTQ96G04 330 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 FAM8A1Q9UBU6 413 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 TLK1Q9UKI8 766 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 ESYT2A0FGR8 921 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 OPHN1O60890 802 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 SERPINB6P35237 376 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 THOC5Q13769 683 aaKnown RBP11.16□□□□□ -0.62
SSH1-203ENST00000546433 ARL13BQ3SXY8 428 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 SIX6OS1Q8N1H7 587 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 MSTO1Q9BUK6 570 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 TEX13BQ9BXU2 312 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 ZMYND12Q9H0C1 365 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 SAT1P21673 171 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 PRELPP51888 382 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 TNFAIP2Q03169 654 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 NNTQ13423 1086 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 SNX1Q13596 522 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 OR6B2Q6IFH4 312 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 FAM83AQ86UY5 434 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 RAVER2Q9HCJ3 691 aaKnown RBP11.16□□□□□ -0.62
SSH1-203ENST00000546433 TBC1D22BQ9NU19 505 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 DONSONQ9NYP3 566 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 ATP11BQ9Y2G3 1177 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 ANGPTL3Q9Y5C1 460 aa11.16□□□□□ -0.62
SSH1-203ENST00000546433 CAMTA1Q9Y6Y1 1673 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 ADM5C9JUS6 153 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 GRM4Q14833 912 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 CCNYQ8ND76 341 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 RAD54LQ92698 747 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 RBM41Q96IZ5 413 aaKnown RBP11.15□□□□□ -0.62
SSH1-203ENST00000546433 LRRC4BQ9NT99 713 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 FAM170AA1A519 330 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 TTC36A6NLP5 189 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 HOXA10P31260 410 aaPredicted RBP11.15□□□□□ -0.62
SSH1-203ENST00000546433 BASP1P80723 227 aaKnown RBP11.15□□□□□ -0.62
SSH1-203ENST00000546433 CAV1Q03135 178 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 ZNF449Q6P9G9 518 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 EEPD1Q7L9B9 569 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 DNAAF3Q8N9W5 541 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 EFHD1Q9BUP0 239 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 CPSF3Q9UKF6 684 aaKnown RBP11.15□□□□□ -0.62
SSH1-203ENST00000546433 CYP2D7A0A087X1C5 515 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 K7ERI5 159 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 TJP3O95049 919 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 GH1P01241 217 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 C6orf222P0C671 652 aaPredicted RBP11.15□□□□□ -0.62
SSH1-203ENST00000546433 IFNAR2P48551 515 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 MB21D2Q8IYB1 491 aaPredicted RBP11.15□□□□□ -0.62
SSH1-203ENST00000546433 TTC13Q8NBP0 860 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 BHMT2Q9H2M3 363 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 ATP6V0A4Q9HBG4 840 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 SEL1LQ9UBV2 794 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 PCDHA6Q9UN73 950 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 PCDHA8Q9Y5H6 950 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 KIF20BQ96Q89 1820 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 ARHGEF28Q8N1W1 1705 aaKnown RBP11.15□□□□□ -0.62
SSH1-203ENST00000546433 NEDD4P46934 1319 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 EXOC1LA0A1B0GW35 172 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 DPYSL4O14531 572 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 IGKV5-2P06315 115 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 STMN1P16949 149 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 TM4SF1P30408 202 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 IFT88Q13099 833 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 ATG16L1Q676U5 607 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 CDC42EP5Q6NZY7 148 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 PCGF5Q86SE9 256 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 TBC1D10CQ8IV04 446 aa11.15□□□□□ -0.62
SSH1-203ENST00000546433 LRRD1A4D1F6 860 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms