RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 TCP11X1B4DZS4 312 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 SPAG7O75391 227 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 EPB41P11171 864 aaKnown RBP15.86■□□□□ 0.13
HOXC11-202ENST00000546378 NEFHP12036 1026 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 POLD1P28340 1107 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 LRRC63Q05C16 580 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 NAIF1Q69YI7 327 aaPredicted RBP15.86■□□□□ 0.13
HOXC11-202ENST00000546378 SLF2Q8IX21 1173 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 PPM1KQ8N3J5 372 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 KAT5Q92993 513 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 HAUS1Q96CS2 278 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.86■□□□□ 0.13
HOXC11-202ENST00000546378 YIPF3Q9GZM5 350 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 DNAJC12Q9UKB3 198 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 PNMA3Q9UL41 463 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 DNM3Q9UQ16 869 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 ZBTB12Q9Y330 459 aaPredicted RBP15.86■□□□□ 0.13
HOXC11-202ENST00000546378 IRS2Q9Y4H2 1338 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 TMEM150BA6NC51 233 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 GCLMP48507 274 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 CNPY4Q8N129 248 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 NSMCE1Q8WV22 266 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 CUL5Q93034 780 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 RBM26Q5T8P6 1007 aaKnown RBP15.85■□□□□ 0.13
HOXC11-202ENST00000546378 KAZNQ674X7 775 aa15.85■□□□□ 0.13
HOXC11-202ENST00000546378 TTC7AQ9ULT0 858 aaPredicted RBP15.85■□□□□ 0.13
HOXC11-202ENST00000546378 LRP5O75197 1615 aa15.85■□□□□ 0.13
HOXC11-202ENST00000546378 PON1P27169 355 aa15.85■□□□□ 0.13
HOXC11-202ENST00000546378 TPCN2Q8NHX9 752 aa15.85■□□□□ 0.13
HOXC11-202ENST00000546378 HAS1Q92839 578 aa15.85■□□□□ 0.13
HOXC11-202ENST00000546378 PPP1R12CQ9BZL4 782 aa15.85■□□□□ 0.13
HOXC11-202ENST00000546378 UBE2TQ9NPD8 197 aaPredicted RBP15.85■□□□□ 0.13
HOXC11-202ENST00000546378 GH1P01241 217 aa15.85■□□□□ 0.13
HOXC11-202ENST00000546378 NFIAQ12857 509 aa15.85■□□□□ 0.13
HOXC11-202ENST00000546378 ANKRD20A8PQ5CZ79 823 aa15.85■□□□□ 0.13
HOXC11-202ENST00000546378 SRRM1Q8IYB3 904 aaKnown RBP15.85■□□□□ 0.13
HOXC11-202ENST00000546378 CAVIN3Q969G5 261 aa15.85■□□□□ 0.13
HOXC11-202ENST00000546378 TEKT1Q969V4 418 aa15.85■□□□□ 0.13
HOXC11-202ENST00000546378 DDX3XO00571 662 aaKnown RBP eCLIP15.84■□□□□ 0.13
HOXC11-202ENST00000546378 NR3C1P04150 777 aa15.84■□□□□ 0.13
HOXC11-202ENST00000546378 EEF2P13639 858 aaKnown RBP15.84■□□□□ 0.13
HOXC11-202ENST00000546378 CYP11B2P19099 503 aa15.84■□□□□ 0.13
HOXC11-202ENST00000546378 FNTAP49354 379 aa15.84■□□□□ 0.13
HOXC11-202ENST00000546378 MRPL12P52815 198 aaKnown RBP15.84■□□□□ 0.13
HOXC11-202ENST00000546378 LMBRD2Q68DH5 695 aaPredicted RBP15.84■□□□□ 0.13
HOXC11-202ENST00000546378 CHMP6Q96FZ7 201 aa15.84■□□□□ 0.13
HOXC11-202ENST00000546378 ISCUQ9H1K1 167 aa15.84■□□□□ 0.13
HOXC11-202ENST00000546378 GEMIN8Q9NWZ8 242 aaKnown RBP15.84■□□□□ 0.13
HOXC11-202ENST00000546378 A0A1W2PRG0 241 aa15.84■□□□□ 0.13
HOXC11-202ENST00000546378 POC1B-GALNT4F8VUJ3 575 aa15.84■□□□□ 0.13
HOXC11-202ENST00000546378 PPP1R11O60927 126 aaPredicted RBP15.84■□□□□ 0.13
HOXC11-202ENST00000546378 CATSPER3Q86XQ3 398 aa15.84■□□□□ 0.13
HOXC11-202ENST00000546378 KLHL29Q96CT2 875 aa15.84■□□□□ 0.13
HOXC11-202ENST00000546378 C9orf72Q96LT7 481 aa15.84■□□□□ 0.13
HOXC11-202ENST00000546378 JMJD4Q9H9V9 463 aa15.84■□□□□ 0.13
HOXC11-202ENST00000546378 UBR3Q6ZT12 1888 aa15.84■□□□□ 0.13
HOXC11-202ENST00000546378 CLRN2A0PK11 232 aa15.83■□□□□ 0.13
HOXC11-202ENST00000546378 GOLGA8SH3BPF8 625 aa15.83■□□□□ 0.13
HOXC11-202ENST00000546378 GOLGA8MH3BSY2 632 aa15.83■□□□□ 0.13
HOXC11-202ENST00000546378 UBOX5O94941 541 aa15.83■□□□□ 0.13
HOXC11-202ENST00000546378 FAM186BQ8IYM0 893 aa15.83■□□□□ 0.13
HOXC11-202ENST00000546378 DNAJC19Q96DA6 116 aa15.83■□□□□ 0.13
HOXC11-202ENST00000546378 SPDL1Q96EA4 605 aa15.83■□□□□ 0.13
HOXC11-202ENST00000546378 XPO6Q96QU8 1125 aaKnown RBP15.83■□□□□ 0.13
HOXC11-202ENST00000546378 NOD2Q9HC29 1040 aa15.83■□□□□ 0.13
HOXC11-202ENST00000546378 A0A1W2PQJ5 194 aa15.83■□□□□ 0.12
HOXC11-202ENST00000546378 KRT5P13647 590 aa15.83■□□□□ 0.12
HOXC11-202ENST00000546378 PMS2P54278 862 aa15.83■□□□□ 0.12
HOXC11-202ENST00000546378 ALG3Q92685 438 aa15.83■□□□□ 0.12
HOXC11-202ENST00000546378 ZNF287Q9HBT7 754 aa15.83■□□□□ 0.12
HOXC11-202ENST00000546378 TSKSQ9UJT2 592 aa15.83■□□□□ 0.12
HOXC11-202ENST00000546378 MYH7P12883 1935 aa15.83■□□□□ 0.12
HOXC11-202ENST00000546378 GPR75-ASB3A0A0A6YYF3 556 aa15.83■□□□□ 0.12
HOXC11-202ENST00000546378 ANKRD62A6NC57 917 aa15.83■□□□□ 0.12
HOXC11-202ENST00000546378 USP11P51784 963 aa15.83■□□□□ 0.12
HOXC11-202ENST00000546378 SKOR1P84550 965 aa15.83■□□□□ 0.12
HOXC11-202ENST00000546378 TMC3Q7Z5M5 1100 aa15.83■□□□□ 0.12
HOXC11-202ENST00000546378 ZFPM1Q8IX07 1006 aa15.83■□□□□ 0.12
HOXC11-202ENST00000546378 TDRD3Q9H7E2 651 aaKnown RBP15.83■□□□□ 0.12
HOXC11-202ENST00000546378 ANKRD63C9JTQ0 380 aa15.82■□□□□ 0.12
HOXC11-202ENST00000546378 CRKP46108 304 aa15.82■□□□□ 0.12
HOXC11-202ENST00000546378 RCAN1P53805 252 aa15.82■□□□□ 0.12
HOXC11-202ENST00000546378 QRICH1Q2TAL8 776 aa15.82■□□□□ 0.12
HOXC11-202ENST00000546378 SUGP1Q8IWZ8 645 aaKnown RBP15.82■□□□□ 0.12
HOXC11-202ENST00000546378 RNF10Q8N5U6 811 aaKnown RBP15.82■□□□□ 0.12
HOXC11-202ENST00000546378 NEK9Q8TD19 979 aa15.82■□□□□ 0.12
HOXC11-202ENST00000546378 ACSF2Q96CM8 615 aaPredicted RBP15.82■□□□□ 0.12
HOXC11-202ENST00000546378 TMEM237Q96Q45 408 aa15.82■□□□□ 0.12
HOXC11-202ENST00000546378 DDX4Q9NQI0 724 aaKnown RBP15.82■□□□□ 0.12
HOXC11-202ENST00000546378 F8VZ95 297 aa15.82■□□□□ 0.12
HOXC11-202ENST00000546378 HARSP12081 509 aaKnown RBP15.82■□□□□ 0.12
HOXC11-202ENST00000546378 KYNUQ16719 465 aa15.82■□□□□ 0.12
HOXC11-202ENST00000546378 NBPF20Q3BBV1 942 aa15.82■□□□□ 0.12
HOXC11-202ENST00000546378 ODR4Q5SWX8 454 aa15.82■□□□□ 0.12
HOXC11-202ENST00000546378 ISLR2Q6UXK2 745 aa15.82■□□□□ 0.12
HOXC11-202ENST00000546378 GSTA5Q7RTV2 222 aa15.82■□□□□ 0.12
HOXC11-202ENST00000546378 PODNQ7Z5L7 613 aa15.82■□□□□ 0.12
HOXC11-202ENST00000546378 PASD1Q8IV76 773 aa15.82■□□□□ 0.12
HOXC11-202ENST00000546378 ZSWIM2Q8NEG5 633 aa15.82■□□□□ 0.12
HOXC11-202ENST00000546378 SSU72P8A0A1W2PR75 194 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms