RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 IFT74Q96LB3 600 aa18.65■□□□□ 0.58
LTBR-215ENST00000546296 ZBED2Q9BTP6 218 aa18.65■□□□□ 0.58
LTBR-215ENST00000546296 RUSC1Q9BVN2 902 aa18.65■□□□□ 0.58
LTBR-215ENST00000546296 POLD4Q9HCU8 107 aa18.65■□□□□ 0.58
LTBR-215ENST00000546296 PCDHA7Q9UN72 937 aa18.65■□□□□ 0.58
LTBR-215ENST00000546296 SFPQP23246 707 aaKnown RBP eCLIP18.64■□□□□ 0.57
LTBR-215ENST00000546296 SLC12A3P55017 1021 aa18.64■□□□□ 0.57
LTBR-215ENST00000546296 DEFB103AP81534 67 aa18.64■□□□□ 0.57
LTBR-215ENST00000546296 SMAD3P84022 425 aaKnown RBP18.64■□□□□ 0.57
LTBR-215ENST00000546296 MCM6Q14566 821 aa18.64■□□□□ 0.57
LTBR-215ENST00000546296 FAM109BQ6ICB4 259 aaPredicted RBP18.64■□□□□ 0.57
LTBR-215ENST00000546296 FAM43BQ6ZT52 329 aaPredicted RBP18.64■□□□□ 0.57
LTBR-215ENST00000546296 C1orf186Q6ZWK4 172 aa18.64■□□□□ 0.57
LTBR-215ENST00000546296 CATSPER4Q7RTX7 472 aa18.64■□□□□ 0.57
LTBR-215ENST00000546296 SRGAP1Q7Z6B7 1085 aa18.64■□□□□ 0.57
LTBR-215ENST00000546296 MYOCDQ8IZQ8 938 aa18.64■□□□□ 0.57
LTBR-215ENST00000546296 RAD54LQ92698 747 aa18.64■□□□□ 0.57
LTBR-215ENST00000546296 SCAND2PQ9GZW5 306 aaPredicted RBP18.64■□□□□ 0.57
LTBR-215ENST00000546296 TMX1Q9H3N1 280 aa18.64■□□□□ 0.57
LTBR-215ENST00000546296 CIZ1Q9ULV3 898 aaPredicted RBP18.64■□□□□ 0.57
LTBR-215ENST00000546296 TRIOBPQ9H2D6 2365 aa18.64■□□□□ 0.57
LTBR-215ENST00000546296 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.63■□□□□ 0.57
LTBR-215ENST00000546296 LRRIQ4A6NIV6 560 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 HIP1RO75146 1068 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 UPP2O95045 317 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 KRT18P05783 430 aaKnown RBP18.63■□□□□ 0.57
LTBR-215ENST00000546296 ZSCAN20P17040 1043 aaPredicted RBP18.63■□□□□ 0.57
LTBR-215ENST00000546296 IBSPP21815 317 aaPredicted RBP18.63■□□□□ 0.57
LTBR-215ENST00000546296 STAT6P42226 847 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 RAD51AP2Q09MP3 1159 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 CAPSQ13938 189 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 PPP2R5AQ15172 486 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 AXDND1Q5T1B0 1012 aaPredicted RBP18.63■□□□□ 0.57
LTBR-215ENST00000546296 FAM117BQ6P1L5 589 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 GPBP1Q86WP2 473 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 HERC6Q8IVU3 1022 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 PDILTQ8N807 584 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 DRC1Q96MC2 740 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 ADAM2Q99965 735 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 TIPINQ9BVW5 301 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 IFT122Q9HBG6 1241 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 FAM13BQ9NYF5 915 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 KCND2Q9NZV8 630 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 STK17AQ9UEE5 414 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 MSRAQ9UJ68 235 aa18.63■□□□□ 0.57
LTBR-215ENST00000546296 RBM19Q9Y4C8 960 aaKnown RBP18.63■□□□□ 0.57
LTBR-215ENST00000546296 INO80B-WBP1J3KQ70 363 aa18.62■□□□□ 0.57
LTBR-215ENST00000546296 SOX1O00570 391 aaPredicted RBP18.62■□□□□ 0.57
LTBR-215ENST00000546296 GUCY2CP25092 1073 aa18.62■□□□□ 0.57
LTBR-215ENST00000546296 RABGGTBP53611 331 aa18.62■□□□□ 0.57
LTBR-215ENST00000546296 PTENP60484 403 aa18.62■□□□□ 0.57
LTBR-215ENST00000546296 POU5F1BQ06416 359 aa18.62■□□□□ 0.57
LTBR-215ENST00000546296 NCBP1Q09161 790 aaKnown RBP18.62■□□□□ 0.57
LTBR-215ENST00000546296 SHC4Q6S5L8 630 aa18.62■□□□□ 0.57
LTBR-215ENST00000546296 TMCO2Q7Z6W1 182 aaPredicted RBP18.62■□□□□ 0.57
LTBR-215ENST00000546296 ZBTB8OSQ8IWT0 167 aa18.62■□□□□ 0.57
LTBR-215ENST00000546296 DEPTORQ8TB45 409 aa18.62■□□□□ 0.57
LTBR-215ENST00000546296 LARP4BQ92615 738 aaKnown RBP18.62■□□□□ 0.57
LTBR-215ENST00000546296 BLOC1S4Q9NUP1 217 aa18.62■□□□□ 0.57
LTBR-215ENST00000546296 TET1Q8NFU7 2136 aa18.62■□□□□ 0.57
LTBR-215ENST00000546296 NPHP3-ACAD11A0A0J9YXS1 232 aa18.61■□□□□ 0.57
LTBR-215ENST00000546296 MGEA5O60502 916 aa18.61■□□□□ 0.57
LTBR-215ENST00000546296 RAB30Q15771 203 aa18.61■□□□□ 0.57
LTBR-215ENST00000546296 TPRNQ4KMQ1 711 aa18.61■□□□□ 0.57
LTBR-215ENST00000546296 SV2BQ7L1I2 683 aa18.61■□□□□ 0.57
LTBR-215ENST00000546296 RTN4RL1Q86UN2 441 aaPredicted RBP18.61■□□□□ 0.57
LTBR-215ENST00000546296 LRRC15Q8TF66 581 aa18.61■□□□□ 0.57
LTBR-215ENST00000546296 LRCH3Q96II8 777 aa18.61■□□□□ 0.57
LTBR-215ENST00000546296 C2orf40Q9H1Z8 148 aa18.61■□□□□ 0.57
LTBR-215ENST00000546296 TSPYL2Q9H2G4 693 aaPredicted RBP18.61■□□□□ 0.57
LTBR-215ENST00000546296 MINDY3Q9H8M7 445 aa18.61■□□□□ 0.57
LTBR-215ENST00000546296 TSHZ2Q9NRE2 1034 aa18.61■□□□□ 0.57
LTBR-215ENST00000546296 RGS18Q9NS28 235 aa18.61■□□□□ 0.57
LTBR-215ENST00000546296 CHMP5Q9NZZ3 219 aa18.61■□□□□ 0.57
LTBR-215ENST00000546296 CCDC169A6NNP5 214 aa18.6■□□□□ 0.57
LTBR-215ENST00000546296 TLL1O43897 1013 aa18.6■□□□□ 0.57
LTBR-215ENST00000546296 ERLIN2O94905 339 aa18.6■□□□□ 0.57
LTBR-215ENST00000546296 NAMPTP43490 491 aa18.6■□□□□ 0.57
LTBR-215ENST00000546296 ARSHQ5FYA8 562 aa18.6■□□□□ 0.57
LTBR-215ENST00000546296 LINC01599Q8WXQ3 324 aa18.6■□□□□ 0.57
LTBR-215ENST00000546296 BSNDQ8WZ55 320 aa18.6■□□□□ 0.57
LTBR-215ENST00000546296 TOP1MTQ969P6 601 aa18.6■□□□□ 0.57
LTBR-215ENST00000546296 PBX4Q9BYU1 374 aa18.6■□□□□ 0.57
LTBR-215ENST00000546296 GDPD2Q9HCC8 539 aa18.6■□□□□ 0.57
LTBR-215ENST00000546296 CHST12Q9NRB3 414 aa18.6■□□□□ 0.57
LTBR-215ENST00000546296 C1orf112Q9NSG2 853 aa18.6■□□□□ 0.57
LTBR-215ENST00000546296 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
LTBR-215ENST00000546296 LRFN2Q9ULH4 789 aa18.6■□□□□ 0.57
LTBR-215ENST00000546296 PIN4Q9Y237 131 aaKnown RBP18.6■□□□□ 0.57
LTBR-215ENST00000546296 PCDHA11Q9Y5I1 949 aa18.6■□□□□ 0.57
LTBR-215ENST00000546296 MYH15Q9Y2K3 1946 aa18.6■□□□□ 0.57
LTBR-215ENST00000546296 ARID2Q68CP9 1835 aa18.6■□□□□ 0.57
LTBR-215ENST00000546296 A0A087X0B3 334 aa18.59■□□□□ 0.57
LTBR-215ENST00000546296 SFI1A8K8P3 1242 aa18.59■□□□□ 0.57
LTBR-215ENST00000546296 GJB5O95377 273 aa18.59■□□□□ 0.57
LTBR-215ENST00000546296 STAG3L1P0CL83 205 aa18.59■□□□□ 0.57
LTBR-215ENST00000546296 LIG1P18858 919 aa18.59■□□□□ 0.57
LTBR-215ENST00000546296 PBX2P40425 430 aa18.59■□□□□ 0.57
LTBR-215ENST00000546296 FXR1P51114 621 aaKnown RBP eCLIP18.59■□□□□ 0.57
LTBR-215ENST00000546296 PEX3P56589 373 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms