RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 PCDHA7Q9UN72 937 aa4.04□□□□□ -1.76
LINC01965-204ENST00000545549 FAM50BQ9Y247 325 aa4.04□□□□□ -1.76
LINC01965-204ENST00000545549 RIPK3Q9Y572 518 aa4.04□□□□□ -1.76
LINC01965-204ENST00000545549 TENM4Q6N022 2769 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 TEX15Q9BXT5 2789 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 MYO9BQ13459 2157 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 PLXNA1Q9UIW2 1896 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 STK36Q9NRP7 1315 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 A0A1B0GVL5 298 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 A0A1W2PNR3 127 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 DCDC2BA2VCK2 349 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 SRRM3A6NNA2 597 aaPredicted RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 MINDY4BA8MYZ0 360 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 TNPO2O14787 897 aaKnown RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 IKBKBO14920 756 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 STRNO43815 780 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 TOP1P11387 765 aaKnown RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 KCNA5P22460 613 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 EDNRBP24530 442 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 KIF5BP33176 963 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 SCNN1AP37088 669 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 UBASH3AP57075 661 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 TUBB4BP68371 445 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 MYL5Q02045 173 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 PDE4BQ07343 736 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 ZNF543Q08ER8 600 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 ST3GAL1Q11201 340 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 SNW1Q13573 536 aaKnown RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 SLC39A14Q15043 492 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 OCLNQ16625 522 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 RTN1Q16799 776 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 PPM1JQ5JR12 505 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 FAM47AQ5JRC9 791 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 RNFT1Q5M7Z0 435 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 FAM83BQ5T0W9 1011 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 KRT40Q6A162 431 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 CCSAPQ6IQ19 270 aaPredicted RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 CCDC174Q6PII3 467 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 SV2AQ7L0J3 742 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 CYB5R4Q7L1T6 521 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 CHST3Q7LGC8 479 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 TMC6Q7Z403 805 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 GPR142Q7Z601 462 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 PPFIBP1Q86W92 1011 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 MICU3Q86XE3 530 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 LRRC8AQ8IWT6 810 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 ELOA2Q8IYF1 753 aaPredicted RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 FMR1NBQ8N0W7 255 aaPredicted RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 SPICE1Q8N0Z3 855 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 TRIML1Q8N9V2 468 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 MLKLQ8NB16 471 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 MNS1Q8NEH6 495 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 CTCFLQ8NI51 663 aaPredicted RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 NPLOC4Q8TAT6 608 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 SOCS4Q8WXH5 440 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 CLEC4DQ8WXI8 215 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 NANOS1Q8WY41 292 aaKnown RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 IRF7Q92985 503 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 PGBD1Q96JS3 809 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 C16orf45Q96MC5 204 aaPredicted RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 CTAGE1Q96RT6 745 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 MAP3K14Q99558 947 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 NUP88Q99567 741 aaPredicted RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 POP1Q99575 1024 aaKnown RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 C2orf49Q9BVC5 232 aaPredicted RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 SLC26A6Q9BXS9 759 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 GTPBP4Q9BZE4 634 aaKnown RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 PHACTR1Q9C0D0 580 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 NUCKS1Q9H1E3 243 aaKnown RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 RANBP17Q9H2T7 1088 aaKnown RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 FOXP1Q9H334 677 aaPredicted RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 MROH8Q9H579 483 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 SH2D4AQ9H788 454 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 NCOA5Q9HCD5 579 aaKnown RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 TMOD4Q9NZQ9 345 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 NRBP1Q9UHY1 535 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 FEM1BQ9UK73 627 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 DIS3Q9Y2L1 958 aaKnown RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 YBX2Q9Y2T7 364 aaKnown RBP4.03□□□□□ -1.76
LINC01965-204ENST00000545549 ITPR3Q14573 2671 aa4.03□□□□□ -1.76
LINC01965-204ENST00000545549 NID2Q14112 1375 aa4.02□□□□□ -1.77
LINC01965-204ENST00000545549 VPS13AQ96RL7 3174 aa4.02□□□□□ -1.77
LINC01965-204ENST00000545549 EP300Q09472 2414 aaPredicted RBP4.02□□□□□ -1.77
LINC01965-204ENST00000545549 MYH15Q9Y2K3 1946 aa4.02□□□□□ -1.77
LINC01965-204ENST00000545549 TMEM8BA6NDV4 472 aa4.02□□□□□ -1.77
LINC01965-204ENST00000545549 B4E1Z4 1266 aa4.02□□□□□ -1.77
LINC01965-204ENST00000545549 SH2B2O14492 632 aaPredicted RBP4.02□□□□□ -1.77
LINC01965-204ENST00000545549 CYTH3O43739 400 aa4.02□□□□□ -1.77
LINC01965-204ENST00000545549 PPP1R11O60927 126 aaPredicted RBP4.02□□□□□ -1.77
LINC01965-204ENST00000545549 CTDNEP1O95476 244 aa4.02□□□□□ -1.77
LINC01965-204ENST00000545549 SNAI1O95863 264 aaPredicted RBP4.02□□□□□ -1.77
LINC01965-204ENST00000545549 ZNF865P0CJ78 1059 aaPredicted RBP4.02□□□□□ -1.77
LINC01965-204ENST00000545549 VSIG8P0DPA2 414 aa4.02□□□□□ -1.77
LINC01965-204ENST00000545549 BMP3P12645 472 aa4.02□□□□□ -1.77
LINC01965-204ENST00000545549 CYBAP13498 195 aa4.02□□□□□ -1.77
LINC01965-204ENST00000545549 PFKFB1P16118 471 aa4.02□□□□□ -1.77
LINC01965-204ENST00000545549 IFNAR1P17181 557 aa4.02□□□□□ -1.77
LINC01965-204ENST00000545549 ERCC3P19447 782 aa4.02□□□□□ -1.77
LINC01965-204ENST00000545549 CALML3P27482 149 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms