RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 BMP2P12643 396 aa8□□□□□ -1.13
LDHA-223ENST00000545215 EPB42P16452 691 aa8□□□□□ -1.13
LDHA-223ENST00000545215 ATP2B1P20020 1258 aa8□□□□□ -1.13
LDHA-223ENST00000545215 CPT1AP50416 773 aa8□□□□□ -1.13
LDHA-223ENST00000545215 MECOMQ03112 1051 aa8□□□□□ -1.13
LDHA-223ENST00000545215 ZNF618Q5T7W0 954 aa8□□□□□ -1.13
LDHA-223ENST00000545215 SPTY2D1Q68D10 685 aaPredicted RBP8□□□□□ -1.13
LDHA-223ENST00000545215 GDF6Q6KF10 455 aaPredicted RBP8□□□□□ -1.13
LDHA-223ENST00000545215 DPH6Q7L8W6 267 aa8□□□□□ -1.13
LDHA-223ENST00000545215 FTSJ3Q8IY81 847 aaKnown RBP8□□□□□ -1.13
LDHA-223ENST00000545215 C1orf127Q8N9H9 656 aa8□□□□□ -1.13
LDHA-223ENST00000545215 REPS2Q8NFH8 660 aa8□□□□□ -1.13
LDHA-223ENST00000545215 MICAL1Q8TDZ2 1067 aa8□□□□□ -1.13
LDHA-223ENST00000545215 SUCLG2Q96I99 432 aa8□□□□□ -1.13
LDHA-223ENST00000545215 SPATA32Q96LK8 384 aa8□□□□□ -1.13
LDHA-223ENST00000545215 BCO2Q9BYV7 579 aa8□□□□□ -1.13
LDHA-223ENST00000545215 GNL3LQ9NVN8 582 aaKnown RBP8□□□□□ -1.13
LDHA-223ENST00000545215 CNTN3Q9P232 1028 aa8□□□□□ -1.13
LDHA-223ENST00000545215 GGT7Q9UJ14 662 aa8□□□□□ -1.13
LDHA-223ENST00000545215 PALD1Q9ULE6 856 aa8□□□□□ -1.13
LDHA-223ENST00000545215 NOB1Q9ULX3 412 aaKnown RBP8□□□□□ -1.13
LDHA-223ENST00000545215 INPP5FQ9Y2H2 1132 aa8□□□□□ -1.13
LDHA-223ENST00000545215 PATJQ8NI35 1801 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 EREGO14944 169 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 SMARCA5O60264 1052 aaPredicted RBP7.99□□□□□ -1.13
LDHA-223ENST00000545215 KPNA6O60684 536 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 XYLBO75191 536 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 GUCY1A2P33402 732 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 ABCB5Q2M3G0 1257 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 TRIM71Q2Q1W2 868 aaKnown RBP7.99□□□□□ -1.13
LDHA-223ENST00000545215 XRRA1Q6P2D8 792 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 NXPE4Q6UWF7 544 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 RUFY4Q6ZNE9 571 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 SESTD1Q86VW0 696 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 UBE2Q2Q8WVN8 375 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 LPIN2Q92539 896 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 FRAT1Q92837 279 aaPredicted RBP7.99□□□□□ -1.13
LDHA-223ENST00000545215 ZNF689Q96CS4 500 aaPredicted RBP7.99□□□□□ -1.13
LDHA-223ENST00000545215 MYL10Q9BUA6 226 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 FOXQ1Q9C009 403 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 CRISPLD1Q9H336 500 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 CUEDC1Q9NWM3 386 aaPredicted RBP7.99□□□□□ -1.13
LDHA-223ENST00000545215 IGSF9Q9P2J2 1179 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 ABCF2Q9UG63 623 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 KLK13Q9UKR3 277 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 RIPK3Q9Y572 518 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 RELNP78509 3460 aa7.99□□□□□ -1.13
LDHA-223ENST00000545215 ASXL3Q9C0F0 2248 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 SHROOM3Q8TF72 1996 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 PARP14Q460N5 1801 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 LDHCP07864 332 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 NBPF7P0C2Y1 421 aaPredicted RBP7.98□□□□□ -1.13
LDHA-223ENST00000545215 TRIM27P14373 513 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 RHOQP17081 205 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 DNAJA1P31689 397 aaKnown RBP7.98□□□□□ -1.13
LDHA-223ENST00000545215 STARD6P59095 220 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 ARID5AQ03989 594 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 BTG3Q14201 252 aaPredicted RBP7.98□□□□□ -1.13
LDHA-223ENST00000545215 SF3A2Q15428 464 aaKnown RBP7.98□□□□□ -1.13
LDHA-223ENST00000545215 CERKLQ49MI3 558 aaPredicted RBP7.98□□□□□ -1.13
LDHA-223ENST00000545215 DUSP28Q4G0W2 176 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 LLGL2Q6P1M3 1020 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 TSSK4Q6SA08 328 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 SH3RF3Q8TEJ3 882 aaPredicted RBP7.98□□□□□ -1.13
LDHA-223ENST00000545215 WHAMMQ8TF30 809 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 ACSF2Q96CM8 615 aaPredicted RBP7.98□□□□□ -1.13
LDHA-223ENST00000545215 KAZALD1Q96I82 304 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 CEP63Q96MT8 703 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 DNAJC2Q99543 621 aaKnown RBP7.98□□□□□ -1.13
LDHA-223ENST00000545215 SUV39H2Q9H5I1 410 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 BICC1Q9H694 974 aaKnown RBP7.98□□□□□ -1.13
LDHA-223ENST00000545215 BCAS3Q9H6U6 928 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 CABP5Q9NP86 173 aa7.98□□□□□ -1.13
LDHA-223ENST00000545215 ABI2Q9NYB9 513 aaPredicted RBP7.98□□□□□ -1.13
LDHA-223ENST00000545215 DBR1Q9UK59 544 aaKnown RBP7.98□□□□□ -1.13
LDHA-223ENST00000545215 C2CD3Q4AC94 2353 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 CAPN8A6NHC0 703 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 ASB14A6NK59 587 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 HYAL3O43820 417 aaPredicted RBP7.97□□□□□ -1.13
LDHA-223ENST00000545215 WISP1O95388 367 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 ZNF806P0C7X5 589 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 SRFP11831 508 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 CEACAM1P13688 526 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 NRLP54845 237 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 CNTN2Q02246 1040 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 MMRN1Q13201 1228 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 GRM2Q14416 872 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 RABL6Q3YEC7 729 aaPredicted RBP7.97□□□□□ -1.13
LDHA-223ENST00000545215 COLEC12Q5KU26 742 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 C6orf118Q5T5N4 469 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 SAMD5Q5TGI4 173 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 MRPL14Q6P1L8 145 aaKnown RBP7.97□□□□□ -1.13
LDHA-223ENST00000545215 ANKRD35Q8N283 1001 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 C12orf50Q8NA57 414 aaPredicted RBP7.97□□□□□ -1.13
LDHA-223ENST00000545215 SEPT8Q92599 483 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 LNPKQ9C0E8 428 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 PRMT8Q9NR22 394 aaPredicted RBP7.97□□□□□ -1.13
LDHA-223ENST00000545215 ARHGEF3Q9NR81 526 aa7.97□□□□□ -1.13
LDHA-223ENST00000545215 TTLL8A6PVC2 850 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 GADD45BO75293 160 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms