RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 EDN1P05305 212 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 PLS3P13797 630 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 GAP43P17677 238 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 NCKAP1LP55160 1127 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 STX17P56962 302 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 PURAQ00577 322 aaKnown RBP7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 FSCN1Q16658 493 aaKnown RBP7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 DGKDQ16760 1214 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 ZC2HC1CQ53FD0 456 aaPredicted RBP7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 ANKRD40Q6AI12 368 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 KLHL10Q6JEL2 608 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 FOXR2Q6PJQ5 311 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 MAEAQ7L5Y9 396 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 ZNF720Q7Z2F6 126 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 KSR1Q8IVT5 923 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 TMEM161BQ8NDZ6 487 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 KLHDC9Q8NEP7 349 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 ZNF507Q8TCN5 953 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 NELFBQ8WX92 580 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 CCDC47Q96A33 483 aaKnown RBP7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 NTPCRQ9BSD7 190 aaKnown RBP7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 KIFC3Q9BVG8 833 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 TIPINQ9BVW5 301 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 TMX1Q9H3N1 280 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 ST6GALNAC4Q9H4F1 302 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 AZI2Q9H6S1 392 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 ATP6V0A4Q9HBG4 840 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 SAMSN1Q9NSI8 373 aaKnown RBP7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 INTS13Q9NVM9 706 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 RWDD2AQ9UIY3 292 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 NFE2L3Q9Y4A8 694 aa7.72□□□□□ -1.17
HMGCS2-204ENST00000544913 MBLAC1A4D2B0 266 aaPredicted RBP7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 H3BRB1 525 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 ARHGAP6O43182 974 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 TGFB1I1O43294 461 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 HBP1O60381 514 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 PGK1P00558 417 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 GJB1P08034 283 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 INSRRP14616 1297 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 GLRA2P23416 452 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 CCNE1P24864 410 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 CST5P28325 142 aaPredicted RBP7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 RFC5P40937 340 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 NPTX2P47972 431 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 PRMT2P55345 433 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 PAK1Q13153 545 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 SPECC1LQ69YQ0 1117 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 OTUD6AQ7L8S5 288 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 C17orf53Q8N3J3 647 aaPredicted RBP7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 MCPH1Q8NEM0 835 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 SPIRE2Q8WWL2 714 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 P2RX5Q93086 422 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 TMEM143Q96AN5 459 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 DHTKD1Q96HY7 919 aaPredicted RBP7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 C16orf45Q96MC5 204 aaPredicted RBP7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 NAA15Q9BXJ9 866 aaKnown RBP7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 TUT1Q9H6E5 874 aaKnown RBP7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 ARHGAP28Q9P2N2 729 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 SEL1LQ9UBV2 794 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 PPME1Q9Y570 386 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 GRIN2DO15399 1336 aa7.71□□□□□ -1.18
HMGCS2-204ENST00000544913 LRRC10BA6NIK2 292 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 RIOK3O14730 519 aaKnown RBP7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 PRPF6O94906 941 aaKnown RBP7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 FAM13AO94988 1023 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 KRT18P05783 430 aaKnown RBP7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 TPM1P09493 284 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 MAPTP10636 758 aaKnown RBP7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 HSPA8P11142 646 aaKnown RBP7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 HOXD10P28358 340 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 GTF2BQ00403 316 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 STIM1Q13586 685 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 CAPSQ13938 189 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 NR1I3Q14994 352 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 ODR4Q5SWX8 454 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 FAM102BQ5T8I3 360 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 ARMCX5Q6P1M9 558 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 SLC39A4Q6P5W5 647 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 MYOCDQ8IZQ8 938 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 PDCL2Q8N4E4 241 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 LRRC71Q8N4P6 559 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 MYCT1Q8N699 235 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 SLAIN1Q8ND83 568 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 RAET1EQ8TD07 263 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 LMBR1Q8WVP7 490 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 CCDC51Q96ER9 411 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 DRC1Q96MC2 740 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 POLR3FQ9H1D9 316 aaPredicted RBP7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 NRBP2Q9NSY0 501 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 PTPN22Q9Y2R2 807 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 TRIM17Q9Y577 477 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 EVPLQ92817 2033 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 COL1A2P08123 1366 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 TRIP12Q14669 1992 aaPredicted RBP7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 A0A1B0GTH6 734 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 TISP43B9A030 160 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 PSMA7O14818 248 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 EIF3DO15371 548 aaKnown RBP eCLIP7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 SLC16A4O15374 487 aa7.7□□□□□ -1.18
HMGCS2-204ENST00000544913 SMIM10L2AP0DMW4 78 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms