RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 PKN3Q6P5Z2 889 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 Q6ZNB5 142 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 UBE2R2Q712K3 238 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-222ENST00000544585 FGD2Q7Z6J4 655 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 ANKRD44Q8N8A2 993 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 GPRC5AQ8NFJ5 357 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 DNAJB8Q8NHS0 232 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 SOCS4Q8WXH5 440 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 BRF1Q92994 677 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 RELTQ969Z4 430 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 GUCD1Q96NT3 240 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 ASPNQ9BXN1 380 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 MRPL18Q9H0U6 180 aaKnown RBP7.37□□□□□ -1.23
CPSF7-222ENST00000544585 ASCC2Q9H1I8 757 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-222ENST00000544585 SEMA6BQ9H3T3 888 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 NOL6Q9H6R4 1146 aaKnown RBP7.37□□□□□ -1.23
CPSF7-222ENST00000544585 FAM105AQ9NUU6 356 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 MORF4L1Q9UBU8 362 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 FHOD1Q9Y613 1164 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 DOCK3Q8IZD9 2030 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 ZSWIM8A7E2V4 1837 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 ARAP2Q8WZ64 1704 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 GAKO14976 1311 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 PFASO15067 1338 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 COL6A3P12111 3177 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 GPR75-ASB3A0A0A6YYF3 556 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-222ENST00000544585 BLACEA4D250 179 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 B4E1Z4 1266 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 C19orf81C9J6K1 198 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 TPD52L2O43399 206 aaKnown RBP7.36□□□□□ -1.23
CPSF7-222ENST00000544585 JMJD7P0C870 316 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 GFRA1P56159 465 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 IRX3P78415 501 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-222ENST00000544585 CACNB2Q08289 660 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-222ENST00000544585 ITKQ08881 620 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 ZNF460Q14592 562 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 ANKRD34AQ69YU3 496 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 MAMDC2Q7Z304 686 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-222ENST00000544585 C2CD4AQ8NCU7 369 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-222ENST00000544585 KLHDC4Q8TBB5 520 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 SYTL5Q8TDW5 730 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-222ENST00000544585 TRIB2Q92519 343 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 USP7Q93009 1102 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 VWCEQ96DN2 955 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 MTMR8Q96EF0 704 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 P2RX7Q99572 595 aaKnown RBP7.36□□□□□ -1.23
CPSF7-222ENST00000544585 CDX2Q99626 313 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-222ENST00000544585 USP44Q9H0E7 712 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 HDAC5Q9UQL6 1122 aa7.36□□□□□ -1.23
CPSF7-222ENST00000544585 ATRNL1Q5VV63 1379 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.35□□□□□ -1.23
CPSF7-222ENST00000544585 TSPAN6O43657 245 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 MSCO60682 206 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 GLRX3O76003 335 aaKnown RBP7.35□□□□□ -1.23
CPSF7-222ENST00000544585 CIAO1O76071 339 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 CPP00450 1065 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 RGS2P41220 211 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 BTDP43251 543 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 DGKGP49619 791 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 HMGCS2P54868 508 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 BACE1P56817 501 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 GRB10Q13322 594 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 PICALMQ13492 652 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 STAT4Q14765 748 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 SF1Q15637 639 aaKnown RBP7.35□□□□□ -1.23
CPSF7-222ENST00000544585 ATP2B3Q16720 1220 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 LRRC26Q2I0M4 334 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 IGF2-ASQ6U949 168 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 ATG9AQ7Z3C6 839 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 CDH24Q86UP0 819 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 DZIP1Q86YF9 867 aaKnown RBP7.35□□□□□ -1.23
CPSF7-222ENST00000544585 FOXP4Q8IVH2 680 aaPredicted RBP7.35□□□□□ -1.23
CPSF7-222ENST00000544585 FIBCD1Q8N539 461 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 RNF141Q8WVD5 230 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 USP6NLQ92738 828 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 EDC3Q96F86 508 aaKnown RBP7.35□□□□□ -1.23
CPSF7-222ENST00000544585 SCLYQ96I15 445 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 FBXL18Q96ME1 805 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 TTC1Q99614 292 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 ASPSCR1Q9BZE9 553 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 SENP6Q9GZR1 1112 aaPredicted RBP7.35□□□□□ -1.23
CPSF7-222ENST00000544585 NKX2-4Q9H2Z4 354 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 DDX4Q9NQI0 724 aaKnown RBP7.35□□□□□ -1.23
CPSF7-222ENST00000544585 TMOD4Q9NZQ9 345 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 ABCF2Q9UG63 623 aa7.35□□□□□ -1.23
CPSF7-222ENST00000544585 HERC5Q9UII4 1024 aaKnown RBP7.35□□□□□ -1.23
CPSF7-222ENST00000544585 SF3B6Q9Y3B4 125 aaKnown RBP7.35□□□□□ -1.23
CPSF7-222ENST00000544585 MGAMO43451 1857 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 GPR39O43194 453 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 ZKSCAN1P17029 563 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-222ENST00000544585 IL15P40933 162 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-222ENST00000544585 ECI1P42126 302 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 RFX5P48382 616 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-222ENST00000544585 USP11P51784 963 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 CCNA1P78396 465 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 GSTO1P78417 241 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 SMAD3P84022 425 aaKnown RBP7.34□□□□□ -1.23
CPSF7-222ENST00000544585 AMPD2Q01433 879 aa7.34□□□□□ -1.23
CPSF7-222ENST00000544585 KRT76Q01546 638 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms