RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 KCNK18Q7Z418 384 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 SH3RF3Q8TEJ3 882 aaPredicted RBP13.8□□□□□ -0.2
PDZD4-209ENST00000544474 C6orf50Q9HD87 102 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 SH3GLB2Q9NR46 395 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 SLC12A6Q9UHW9 1150 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 KIAA1024Q9UPX6 916 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 H2AFZP0C0S5 128 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 PMS2P54278 862 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 TMEM266Q2M3C6 531 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 H2AFVQ71UI9 128 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 ZC3H18Q86VM9 953 aaKnown RBP13.8□□□□□ -0.2
PDZD4-209ENST00000544474 HOOK3Q86VS8 718 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 ANKRD27Q96NW4 1050 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 SYT15Q9BQS2 421 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 ISCUQ9H1K1 167 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 GALNT8Q9NY28 637 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 GPR75-ASB3A0A0A6YYF3 556 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 POC1B-GALNT4F8VUJ3 575 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 TOM1O60784 492 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 ALADP13716 330 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 TUBP50607 506 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 MECOMQ03112 1051 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 PARP10Q53GL7 1025 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 RASIP1Q5U651 963 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 RNF220Q5VTB9 566 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 TBC1D9BQ66K14 1250 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 KRT25Q7Z3Z0 450 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 APBB1IPQ7Z5R6 666 aaPredicted RBP13.8□□□□□ -0.2
PDZD4-209ENST00000544474 OPTNQ96CV9 577 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 C7orf25Q9BPX7 421 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 BCAS3Q9H6U6 928 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 ATP8A2Q9NTI2 1148 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 AMFRQ9UKV5 643 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 ATP6V0A2Q9Y487 856 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 ASB3Q9Y575 518 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 LRP6O75581 1613 aa13.8□□□□□ -0.2
PDZD4-209ENST00000544474 NUP188Q5SRE5 1749 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 CHD4Q14839 1912 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 ABLIM1O14639 778 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 MAP3K13O43283 966 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 SERPING1P05155 500 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 GNA11P29992 359 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 KLC1Q07866 573 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 KCNH2Q12809 1159 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 PABPC4Q13310 644 aaKnown RBP eCLIP13.79□□□□□ -0.2
PDZD4-209ENST00000544474 BIRC3Q13489 604 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 LBRQ14739 615 aaKnown RBP13.79□□□□□ -0.2
PDZD4-209ENST00000544474 FAM26FQ5R3K3 315 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 AMIGO3Q86WK7 504 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 RNF10Q8N5U6 811 aaKnown RBP13.79□□□□□ -0.2
PDZD4-209ENST00000544474 DYDC2Q96IM9 177 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 BTBD6Q96KE9 485 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 ZWILCHQ9H900 591 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.79□□□□□ -0.2
PDZD4-209ENST00000544474 COL4A3BPQ9Y5P4 624 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 F8VZ95 297 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 UBTFL6P0CB48 400 aaPredicted RBP13.79□□□□□ -0.2
PDZD4-209ENST00000544474 SLC16A2P36021 539 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 STAT3P40763 770 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 RFC5P40937 340 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 KCNMA1Q12791 1236 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 GALNT17Q6IS24 598 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 NEK8Q86SG6 692 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 VPS36Q86VN1 386 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 MREGQ8N565 214 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 PIGSQ96S52 555 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 RAB34Q9BZG1 259 aa13.79□□□□□ -0.2
PDZD4-209ENST00000544474 CHMP2AO43633 222 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 GBP1P32455 592 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 ZNF571Q7Z3V5 609 aaPredicted RBP13.78□□□□□ -0.2
PDZD4-209ENST00000544474 TMC3Q7Z5M5 1100 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 ZSCAN29Q8IWY8 852 aaPredicted RBP13.78□□□□□ -0.2
PDZD4-209ENST00000544474 LRRC47Q8N1G4 583 aaKnown RBP13.78□□□□□ -0.2
PDZD4-209ENST00000544474 TGFBRAP1Q8WUH2 860 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 KIFAP3Q92845 792 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 ERP27Q96DN0 273 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 NUDCD1Q96RS6 583 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 RPS6KC1Q96S38 1066 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 PLCB1Q9NQ66 1216 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 KLHL14Q9P2G3 628 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 PKD1L3Q7Z443 1732 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 TMEM120BA0PK00 339 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 ENTPD5O75356 428 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 SUN1O94901 812 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 BAG2O95816 211 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 SSTR3P32745 418 aaPredicted RBP13.78□□□□□ -0.2
PDZD4-209ENST00000544474 SNAP25P60880 206 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 SEPT7Q16181 437 aaKnown RBP13.78□□□□□ -0.2
PDZD4-209ENST00000544474 GRIK5Q16478 980 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 C2CD6Q53TS8 623 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 MDH1BQ5I0G3 518 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
PDZD4-209ENST00000544474 PFDN1O60925 122 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 ETS2P15036 469 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 HSPA9P38646 679 aaKnown RBP13.78□□□□□ -0.2
PDZD4-209ENST00000544474 ZBTB16Q05516 673 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 DNAJC3Q13217 504 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 MTMR3Q13615 1198 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 NAB2Q15742 525 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 SLC18A3Q16572 532 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms