RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 SEPT14Q6ZU15 432 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 CEP170P1Q96L14 293 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 NAV1Q8NEY1 1877 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 VWA5AO00534 786 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 GJB1P08034 283 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 ASNSP08243 561 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 CFHP08603 1231 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 PTGER2P43116 358 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 MARSP56192 900 aaKnown RBP4.1□□□□□ -1.75
BRCA2-206ENST00000544455 WNT7BP56706 349 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 HLTFQ14527 1009 aaKnown RBP eCLIP4.1□□□□□ -1.756e-6■■■□□ 17.2
BRCA2-206ENST00000544455 BORCS6Q96GS4 357 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 PSMD1Q99460 953 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 GBP3Q9H0R5 595 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 HSPBP1Q9NZL4 362 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 AMACRQ9UHK6 382 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 SMIM23A6NLE4 172 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 NT5C2P49902 561 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 HSD17B4P51659 736 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 TMEM132BQ14DG7 1078 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 METTL13Q8N6R0 699 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 ZNF526Q8TF50 670 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-206ENST00000544455 CASKIN2Q8WXE0 1202 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 TATDN2Q93075 761 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 SEPT9Q9UHD8 586 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-206ENST00000544455 FRMD4BQ9Y2L6 1034 aa4.1□□□□□ -1.75
BRCA2-206ENST00000544455 TTLL13PA6NNM8 815 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 CSDE1O75534 798 aaKnown RBP4.09□□□□□ -1.75
BRCA2-206ENST00000544455 FRMD5Q7Z6J6 570 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 FAM212AQ96EL1 285 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 GPR88Q9GZN0 384 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 TUFT1Q9NNX1 390 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 PPP1R9AQ9ULJ8 1098 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 RGS20O76081 388 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 LCA5LO95447 670 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 GJB6O95452 261 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 NR3C2P08235 984 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 STAT1P42224 750 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 OSTNP61366 133 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 BFSP1Q12934 665 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 EDRF1Q3B7T1 1238 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 TREML2Q5T2D2 321 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 MOXD1Q6UVY6 613 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 CCNI2Q6ZMN8 369 aaPredicted RBP4.09□□□□□ -1.75
BRCA2-206ENST00000544455 ARL8AQ96BM9 186 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 GLT8D2Q9H1C3 349 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 AGO4Q9HCK5 861 aaKnown RBP4.09□□□□□ -1.75
BRCA2-206ENST00000544455 RNF146Q9NTX7 359 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 DDNO94850 711 aaPredicted RBP4.09□□□□□ -1.75
BRCA2-206ENST00000544455 KRT13P13646 458 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 KRT5P13647 590 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 MARK3P27448 753 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 SOX5P35711 763 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 MARCKSL1P49006 195 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 HS2ST1Q7LGA3 356 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 RPUSD2Q8IZ73 545 aaKnown RBP4.09□□□□□ -1.75
BRCA2-206ENST00000544455 USP38Q8NB14 1042 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 SEMA4DQ92854 862 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 BICD1Q96G01 975 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 PCDHB18PQ96TA0 734 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 FRMPD4Q14CM0 1322 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 DENND3A2RUS2 1198 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 EIF3JO75822 258 aaKnown RBP4.09□□□□□ -1.75
BRCA2-206ENST00000544455 PAFAH1B1P43034 410 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 CNTN2Q02246 1040 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 RPS6KA1Q15418 735 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 SLC47A2Q86VL8 602 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 OLFML3Q9NRN5 406 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 PIK3CDO00329 1044 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 MMEP08473 750 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 RPL13P26373 211 aaKnown RBP4.09□□□□□ -1.75
BRCA2-206ENST00000544455 RARRES1P49788 294 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 FAM213AQ9BRX8 229 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 NRXN2Q9P2S2 1712 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 F8VZ95 297 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 BUB1BO60566 1050 aaPredicted RBP4.09□□□□□ -1.75
BRCA2-206ENST00000544455 VAMP7P51809 220 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 JAM2P57087 298 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 CKAP4Q07065 602 aaKnown RBP4.09□□□□□ -1.75
BRCA2-206ENST00000544455 TAF4BQ92750 862 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 ERVK-5Q9HDB9 667 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 KMT5AQ9NQR1 393 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 RNF19AQ9NV58 838 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 BCCIPQ9P287 314 aaKnown RBP eCLIP4.09□□□□□ -1.75
BRCA2-206ENST00000544455 RSPH14Q9UHP6 348 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 PTPN22Q9Y2R2 807 aa4.09□□□□□ -1.75
BRCA2-206ENST00000544455 PFASO15067 1338 aa4.09□□□□□ -1.76
BRCA2-206ENST00000544455 ADGRA3Q8IWK6 1321 aa4.09□□□□□ -1.76
BRCA2-206ENST00000544455 SSU72P8A0A1W2PR75 194 aa4.09□□□□□ -1.76
BRCA2-206ENST00000544455 ADM5C9JUS6 153 aa4.09□□□□□ -1.76
BRCA2-206ENST00000544455 ACOT2P49753 483 aa4.09□□□□□ -1.76
BRCA2-206ENST00000544455 CDK17Q00537 523 aa4.09□□□□□ -1.76
BRCA2-206ENST00000544455 ORC1Q13415 861 aa4.09□□□□□ -1.76
BRCA2-206ENST00000544455 ZNF394Q53GI3 561 aa4.09□□□□□ -1.76
BRCA2-206ENST00000544455 WDR78Q5VTH9 848 aa4.09□□□□□ -1.76
BRCA2-206ENST00000544455 PEX26Q7Z412 305 aa4.09□□□□□ -1.76
BRCA2-206ENST00000544455 ZBTB33Q86T24 672 aa4.09□□□□□ -1.76
BRCA2-206ENST00000544455 UBXN6Q9BZV1 441 aa4.09□□□□□ -1.76
BRCA2-206ENST00000544455 PXMP2Q9NR77 195 aa4.09□□□□□ -1.76
BRCA2-206ENST00000544455 CTTNBP2NLQ9P2B4 639 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms