RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SLC35C1Q96A29 364 aa21.73■■□□□ 1.07
COPS7A-218ENST00000543939 KIFC3Q9BVG8 833 aa21.73■■□□□ 1.07
COPS7A-218ENST00000543939 EMSYQ7Z589 1322 aa21.73■■□□□ 1.07
COPS7A-218ENST00000543939 SLC15A5A6NIM6 579 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 ZSCAN12O43309 604 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 SNAI1O95863 264 aaPredicted RBP21.72■■□□□ 1.07
COPS7A-218ENST00000543939 MEA1Q16626 185 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 WDR59Q6PJI9 974 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 MAP4K3Q8IVH8 894 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 ZNF397Q8NF99 534 aaPredicted RBP21.72■■□□□ 1.07
COPS7A-218ENST00000543939 MAML3Q96JK9 1138 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 IFT74Q96LB3 600 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 EDEM3Q9BZQ6 932 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 EXOC7Q9UPT5 735 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 FRMD4BQ9Y2L6 1034 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 PPME1Q9Y570 386 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 DOCK3Q8IZD9 2030 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 DENND3A2RUS2 1198 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 TISP43B9A030 160 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 TNNT1P13805 278 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 ARHGAP1Q07960 439 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 TAF1CQ15572 869 aaPredicted RBP21.72■■□□□ 1.07
COPS7A-218ENST00000543939 PTPN14Q15678 1187 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 TSR1Q2NL82 804 aaKnown RBP21.72■■□□□ 1.07
COPS7A-218ENST00000543939 NEK11Q8NG66 645 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 BBXQ8WY36 941 aaPredicted RBP21.72■■□□□ 1.07
COPS7A-218ENST00000543939 GLG1Q92896 1179 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 KCNG1Q9UIX4 513 aa21.72■■□□□ 1.07
COPS7A-218ENST00000543939 ADGRA3Q8IWK6 1321 aa21.71■■□□□ 1.07
COPS7A-218ENST00000543939 SIP14410 1827 aa21.71■■□□□ 1.07
COPS7A-218ENST00000543939 ARL2P36404 184 aa21.71■■□□□ 1.07
COPS7A-218ENST00000543939 DCAF17Q5H9S7 520 aaPredicted RBP21.71■■□□□ 1.07
COPS7A-218ENST00000543939 SLC7A3Q8WY07 619 aa21.71■■□□□ 1.07
COPS7A-218ENST00000543939 KCNN1Q92952 543 aa21.71■■□□□ 1.07
COPS7A-218ENST00000543939 TMEM143Q96AN5 459 aa21.71■■□□□ 1.07
COPS7A-218ENST00000543939 CHP1Q99653 195 aa21.71■■□□□ 1.07
COPS7A-218ENST00000543939 ARHGAP28Q9P2N2 729 aa21.71■■□□□ 1.07
COPS7A-218ENST00000543939 TLL2Q9Y6L7 1015 aa21.71■■□□□ 1.07
COPS7A-218ENST00000543939 EXOC3O60645 756 aa21.7■■□□□ 1.06
COPS7A-218ENST00000543939 NOL4O94818 638 aa21.7■■□□□ 1.06
COPS7A-218ENST00000543939 HNRNPH3P31942 346 aaKnown RBP21.7■■□□□ 1.06
COPS7A-218ENST00000543939 INHBEP58166 350 aa21.7■■□□□ 1.06
COPS7A-218ENST00000543939 LAMC2Q13753 1193 aa21.7■■□□□ 1.06
COPS7A-218ENST00000543939 TRIM50Q86XT4 487 aa21.7■■□□□ 1.06
COPS7A-218ENST00000543939 IFNL1Q8IU54 200 aa21.7■■□□□ 1.06
COPS7A-218ENST00000543939 ATP8B4Q8TF62 1192 aa21.7■■□□□ 1.06
COPS7A-218ENST00000543939 BAP1Q92560 729 aa21.7■■□□□ 1.06
COPS7A-218ENST00000543939 CBWD1Q9BRT8 395 aa21.7■■□□□ 1.06
COPS7A-218ENST00000543939 CRACR2AQ9BSW2 395 aa21.7■■□□□ 1.06
COPS7A-218ENST00000543939 DESI2Q9BSY9 194 aa21.7■■□□□ 1.06
COPS7A-218ENST00000543939 LSM14BQ9BX40 385 aaKnown RBP21.7■■□□□ 1.06
COPS7A-218ENST00000543939 ADGRG1Q9Y653 693 aa21.7■■□□□ 1.06
COPS7A-218ENST00000543939 FAM155AB1AL88 458 aaPredicted RBP21.69■■□□□ 1.06
COPS7A-218ENST00000543939 H0YCG3 227 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 MAFO75444 373 aaPredicted RBP21.69■■□□□ 1.06
COPS7A-218ENST00000543939 PPP2R5AQ15172 486 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 TCERG1LQ5VWI1 586 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 NPLOC4Q8TAT6 608 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 ASAP3Q8TDY4 903 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 SMARCAD1Q9H4L7 1026 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 GH1P01241 217 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 CCDC175P0C221 793 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 GLRA2P23416 452 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 MARK3P27448 753 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 ABCD1P33897 745 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 SLC26A2P50443 739 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 CDK17Q00537 523 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 PLCB4Q15147 1175 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 MORN1Q5T089 497 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 DPY19L2P1Q6NXN4 242 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 TINF2Q9BSI4 451 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 PCIF1Q9H4Z3 704 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 ZNHIT6Q9NWK9 470 aaKnown RBP21.69■■□□□ 1.06
COPS7A-218ENST00000543939 HSPBP1Q9NZL4 362 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 CEP72Q9P209 647 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 PLAGL2Q9UPG8 496 aa21.69■■□□□ 1.06
COPS7A-218ENST00000543939 GTPBP10A4D1E9 387 aaKnown RBP21.68■■□□□ 1.06
COPS7A-218ENST00000543939 ANKRD63C9JTQ0 380 aa21.68■■□□□ 1.06
COPS7A-218ENST00000543939 KIF2AO00139 706 aaPredicted RBP21.68■■□□□ 1.06
COPS7A-218ENST00000543939 ADCYAP1R1P41586 468 aa21.68■■□□□ 1.06
COPS7A-218ENST00000543939 NAMPTP43490 491 aa21.68■■□□□ 1.06
COPS7A-218ENST00000543939 GJC2Q5T442 439 aaPredicted RBP21.68■■□□□ 1.06
COPS7A-218ENST00000543939 C17orf99Q6UX52 265 aa21.68■■□□□ 1.06
COPS7A-218ENST00000543939 TAS1R3Q7RTX0 852 aa21.68■■□□□ 1.06
COPS7A-218ENST00000543939 XXYLT1Q8NBI6 393 aa21.68■■□□□ 1.06
COPS7A-218ENST00000543939 EMID1Q96A84 441 aaPredicted RBP21.68■■□□□ 1.06
COPS7A-218ENST00000543939 PLCB1Q9NQ66 1216 aa21.68■■□□□ 1.06
COPS7A-218ENST00000543939 SLC5A4Q9NY91 659 aa21.68■■□□□ 1.06
COPS7A-218ENST00000543939 R3HCC1Q9Y3T6 440 aaKnown RBP21.68■■□□□ 1.06
COPS7A-218ENST00000543939 GOLGA6L9A6NEM1 432 aa21.67■■□□□ 1.06
COPS7A-218ENST00000543939 ZBTB42B2RXF5 422 aa21.67■■□□□ 1.06
COPS7A-218ENST00000543939 MAPK13O15264 365 aa21.67■■□□□ 1.06
COPS7A-218ENST00000543939 TLR2O60603 784 aa21.67■■□□□ 1.06
COPS7A-218ENST00000543939 SCP2P22307 547 aa21.67■■□□□ 1.06
COPS7A-218ENST00000543939 CNGA1P29973 690 aa21.67■■□□□ 1.06
COPS7A-218ENST00000543939 ADSSP30520 456 aa21.67■■□□□ 1.06
COPS7A-218ENST00000543939 MSL3Q8N5Y2 521 aaKnown RBP21.67■■□□□ 1.06
COPS7A-218ENST00000543939 GANQ9H2C0 597 aa21.67■■□□□ 1.06
COPS7A-218ENST00000543939 BFSP1Q12934 665 aa21.66■■□□□ 1.06
COPS7A-218ENST00000543939 EXOC3L4Q17RC7 722 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms