RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 CDC42EP1Q00587 391 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 RAD51AP2Q09MP3 1159 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 MAPK7Q13164 816 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 IKBKEQ14164 716 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 DHX8Q14562 1220 aaKnown RBP16.74■□□□□ 0.27
CD9-210ENST00000543916 MXD4Q14582 209 aaPredicted RBP16.74■□□□□ 0.27
CD9-210ENST00000543916 ARSHQ5FYA8 562 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 RRAGBQ5VZM2 374 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 DAW1Q8N136 415 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 RNF149Q8NC42 400 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 BSNDQ8WZ55 320 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 APBB2Q92870 758 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 GCOM2Q9BZD3 368 aaPredicted RBP16.74■□□□□ 0.27
CD9-210ENST00000543916 TMX1Q9H3N1 280 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 STK17AQ9UEE5 414 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 NPHP3-ACAD11A0A0J9YXS1 232 aa16.73■□□□□ 0.27
CD9-210ENST00000543916 ABHD14A-ACY1A0A1B0GW23 586 aa16.73■□□□□ 0.27
CD9-210ENST00000543916 HIP1RO75146 1068 aa16.73■□□□□ 0.27
CD9-210ENST00000543916 GUCY2CP25092 1073 aa16.73■□□□□ 0.27
CD9-210ENST00000543916 STAT6P42226 847 aa16.73■□□□□ 0.27
CD9-210ENST00000543916 NFX1Q12986 1120 aaKnown RBP16.73■□□□□ 0.27
CD9-210ENST00000543916 CCDC73Q6ZRK6 1079 aa16.73■□□□□ 0.27
CD9-210ENST00000543916 GPBP1Q86WP2 473 aa16.73■□□□□ 0.27
CD9-210ENST00000543916 LINC01599Q8WXQ3 324 aa16.73■□□□□ 0.27
CD9-210ENST00000543916 MTIF3Q9H2K0 278 aaKnown RBP16.73■□□□□ 0.27
CD9-210ENST00000543916 MINDY3Q9H8M7 445 aa16.73■□□□□ 0.27
CD9-210ENST00000543916 ST3GAL5Q9UNP4 418 aa16.73■□□□□ 0.27
CD9-210ENST00000543916 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.72■□□□□ 0.27
CD9-210ENST00000543916 GPR182O15218 404 aa16.72■□□□□ 0.27
CD9-210ENST00000543916 MGEA5O60502 916 aa16.72■□□□□ 0.27
CD9-210ENST00000543916 PHKA2P46019 1235 aa16.72■□□□□ 0.27
CD9-210ENST00000543916 DEFB103AP81534 67 aa16.72■□□□□ 0.27
CD9-210ENST00000543916 CACNB1Q02641 598 aaPredicted RBP16.72■□□□□ 0.27
CD9-210ENST00000543916 TFDP1Q14186 410 aa16.72■□□□□ 0.27
CD9-210ENST00000543916 E2F4Q16254 413 aa16.72■□□□□ 0.27
CD9-210ENST00000543916 ADALQ6DHV7 355 aa16.72■□□□□ 0.27
CD9-210ENST00000543916 FAM109BQ6ICB4 259 aaPredicted RBP16.72■□□□□ 0.27
CD9-210ENST00000543916 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.72■□□□□ 0.27
CD9-210ENST00000543916 KIFAP3Q92845 792 aa16.72■□□□□ 0.27
CD9-210ENST00000543916 KCND2Q9NZV8 630 aa16.72■□□□□ 0.27
CD9-210ENST00000543916 SLC4A7Q9Y6M7 1214 aa16.72■□□□□ 0.27
CD9-210ENST00000543916 LRRIQ4A6NIV6 560 aa16.71■□□□□ 0.27
CD9-210ENST00000543916 PTENP60484 403 aa16.71■□□□□ 0.27
CD9-210ENST00000543916 POU5F1BQ06416 359 aa16.71■□□□□ 0.27
CD9-210ENST00000543916 SRGAP1Q7Z6B7 1085 aa16.71■□□□□ 0.27
CD9-210ENST00000543916 TMCO2Q7Z6W1 182 aaPredicted RBP16.71■□□□□ 0.27
CD9-210ENST00000543916 RTN4RL1Q86UN2 441 aaPredicted RBP16.71■□□□□ 0.27
CD9-210ENST00000543916 IFNLR1Q8IU57 520 aaPredicted RBP16.71■□□□□ 0.27
CD9-210ENST00000543916 DHX58Q96C10 678 aa16.71■□□□□ 0.27
CD9-210ENST00000543916 REEP2Q9BRK0 252 aa16.71■□□□□ 0.27
CD9-210ENST00000543916 TIPINQ9BVW5 301 aa16.71■□□□□ 0.27
CD9-210ENST00000543916 FAM13BQ9NYF5 915 aa16.71■□□□□ 0.27
CD9-210ENST00000543916 ADGRA3Q8IWK6 1321 aa16.7■□□□□ 0.26
CD9-210ENST00000543916 SFI1A8K8P3 1242 aa16.7■□□□□ 0.26
CD9-210ENST00000543916 GRXCR1A8MXD5 290 aa16.7■□□□□ 0.26
CD9-210ENST00000543916 POLR2DO15514 142 aaKnown RBP16.7■□□□□ 0.26
CD9-210ENST00000543916 EFCAB14O75071 495 aa16.7■□□□□ 0.26
CD9-210ENST00000543916 PFKFB1P16118 471 aa16.7■□□□□ 0.26
CD9-210ENST00000543916 CMA1P23946 247 aa16.7■□□□□ 0.26
CD9-210ENST00000543916 NAMPTP43490 491 aa16.7■□□□□ 0.26
CD9-210ENST00000543916 KCNJ6P48051 423 aa16.7■□□□□ 0.26
CD9-210ENST00000543916 MBTD1Q05BQ5 628 aa16.7■□□□□ 0.26
CD9-210ENST00000543916 DSC3Q14574 896 aa16.7■□□□□ 0.26
CD9-210ENST00000543916 LRIT3Q3SXY7 679 aa16.7■□□□□ 0.26
CD9-210ENST00000543916 TPRNQ4KMQ1 711 aa16.7■□□□□ 0.26
CD9-210ENST00000543916 HABP4Q5JVS0 413 aaKnown RBP16.7■□□□□ 0.26
CD9-210ENST00000543916 ODR4Q5SWX8 454 aa16.7■□□□□ 0.26
CD9-210ENST00000543916 CDCA2Q69YH5 1023 aaPredicted RBP16.7■□□□□ 0.26
CD9-210ENST00000543916 DRC1Q96MC2 740 aa16.7■□□□□ 0.26
CD9-210ENST00000543916 NFKBIZQ9BYH8 718 aa16.7■□□□□ 0.26
CD9-210ENST00000543916 INO80BQ9C086 356 aaPredicted RBP16.7■□□□□ 0.26
CD9-210ENST00000543916 KCNH3Q9ULD8 1083 aa16.7■□□□□ 0.26
CD9-210ENST00000543916 LAMA2P24043 3122 aaKnown RBP16.7■□□□□ 0.26
CD9-210ENST00000543916 A0A1B0GVL5 298 aa16.69■□□□□ 0.26
CD9-210ENST00000543916 MYMKA6NI61 221 aa16.69■□□□□ 0.26
CD9-210ENST00000543916 ENPP3O14638 875 aa16.69■□□□□ 0.26
CD9-210ENST00000543916 ATP2A2P16615 1042 aaKnown RBP16.69■□□□□ 0.26
CD9-210ENST00000543916 SFPQP23246 707 aaKnown RBP eCLIP16.69■□□□□ 0.26
CD9-210ENST00000543916 PEX3P56589 373 aa16.69■□□□□ 0.26
CD9-210ENST00000543916 GIT2Q14161 759 aa16.69■□□□□ 0.26
CD9-210ENST00000543916 PPP2R5AQ15172 486 aa16.69■□□□□ 0.26
CD9-210ENST00000543916 SV2BQ7L1I2 683 aa16.69■□□□□ 0.26
CD9-210ENST00000543916 CATSPER4Q7RTX7 472 aa16.69■□□□□ 0.26
CD9-210ENST00000543916 IFT74Q96LB3 600 aa16.69■□□□□ 0.26
CD9-210ENST00000543916 SLC9A7Q96T83 725 aa16.69■□□□□ 0.26
CD9-210ENST00000543916 KIFC3Q9BVG8 833 aa16.69■□□□□ 0.26
CD9-210ENST00000543916 FTHL17Q9BXU8 183 aa16.69■□□□□ 0.26
CD9-210ENST00000543916 TSPYL2Q9H2G4 693 aaPredicted RBP16.69■□□□□ 0.26
CD9-210ENST00000543916 GOLPH3LQ9H4A5 285 aa16.69■□□□□ 0.26
CD9-210ENST00000543916 ODF2LQ9ULJ1 636 aa16.69■□□□□ 0.26
CD9-210ENST00000543916 HPSEQ9Y251 543 aa16.69■□□□□ 0.26
CD9-210ENST00000543916 COL4A6Q14031 1691 aa16.69■□□□□ 0.26
CD9-210ENST00000543916 A0A1W2PQ27 194 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 A0A1W2PQ64 194 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 A0A1W2PQD8 194 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 DENND3A2RUS2 1198 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 INO80B-WBP1J3KQ70 363 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 SOX1O00570 391 aaPredicted RBP16.68■□□□□ 0.26
CD9-210ENST00000543916 AMHP03971 560 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 KRT18P05783 430 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms