RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 PIGOQ8TEQ8 1089 aa21.29■■□□□ 1
SPPL3-208ENST00000543854 MRPL38Q96DV4 380 aaKnown RBP21.29■■□□□ 1
SPPL3-208ENST00000543854 POLR3CQ9BUI4 534 aaPredicted RBP21.29■■□□□ 1
SPPL3-208ENST00000543854 PCDHB6Q9Y5E3 794 aa21.29■■□□□ 1
SPPL3-208ENST00000543854 GTF3C3Q9Y5Q9 886 aa21.29■■□□□ 1
SPPL3-208ENST00000543854 LAD1O00515 517 aa21.28■■□□□ 1
SPPL3-208ENST00000543854 HOXA2O43364 376 aa21.28■■□□□ 1
SPPL3-208ENST00000543854 MED24O75448 989 aa21.28■■□□□ 1
SPPL3-208ENST00000543854 SPATA31C1P0DKV0 1188 aa21.28■■□□□ 1
SPPL3-208ENST00000543854 FAM189BP81408 668 aa21.28■■□□□ 1
SPPL3-208ENST00000543854 LAMTOR4Q0VGL1 99 aa21.28■■□□□ 1
SPPL3-208ENST00000543854 PTGDRQ13258 359 aa21.28■■□□□ 1
SPPL3-208ENST00000543854 RILPL1Q5EBL4 403 aa21.28■■□□□ 1
SPPL3-208ENST00000543854 CATSPER4Q7RTX7 472 aa21.28■■□□□ 1
SPPL3-208ENST00000543854 FERMT3Q86UX7 667 aa21.28■■□□□ 1
SPPL3-208ENST00000543854 ATXN2LQ8WWM7 1075 aaKnown RBP21.28■■□□□ 1
SPPL3-208ENST00000543854 PLVAPQ9BX97 442 aa21.28■■□□□ 1
SPPL3-208ENST00000543854 RAB34Q9BZG1 259 aa21.28■■□□□ 1
SPPL3-208ENST00000543854 IFT122Q9HBG6 1241 aa21.28■■□□□ 1
SPPL3-208ENST00000543854 XPNPEP1Q9NQW7 623 aa21.28■■□□□ 1
SPPL3-208ENST00000543854 CHST12Q9NRB3 414 aa21.28■■□□□ 1
SPPL3-208ENST00000543854 PIN4Q9Y237 131 aaKnown RBP21.28■■□□□ 1
SPPL3-208ENST00000543854 TBKBP1A7MCY6 615 aa21.27■■□□□ 1
SPPL3-208ENST00000543854 ASAP2O43150 1006 aa21.27■■□□□ 1
SPPL3-208ENST00000543854 SRGAP2CP0DJJ0 459 aa21.27■■□□□ 1
SPPL3-208ENST00000543854 FGFR1P11362 822 aa21.27■■□□□ 1
SPPL3-208ENST00000543854 XRCC6P12956 609 aaKnown RBP eCLIP21.27■■□□□ 1
SPPL3-208ENST00000543854 RPA1P27694 616 aa21.27■■□□□ 1
SPPL3-208ENST00000543854 MXD4Q14582 209 aaPredicted RBP21.27■■□□□ 1
SPPL3-208ENST00000543854 TIGD5Q53EQ6 642 aa21.27■■□□□ 1
SPPL3-208ENST00000543854 POTEGQ6S5H5 508 aa21.27■■□□□ 1
SPPL3-208ENST00000543854 SRGAP1Q7Z6B7 1085 aa21.27■■□□□ 1
SPPL3-208ENST00000543854 ECHDC2Q86YB7 292 aa21.27■■□□□ 1
SPPL3-208ENST00000543854 ABI1Q8IZP0 508 aa21.27■■□□□ 1
SPPL3-208ENST00000543854 C4orf32Q8N8J7 132 aa21.27■■□□□ 1
SPPL3-208ENST00000543854 RNF149Q8NC42 400 aa21.27■■□□□ 1
SPPL3-208ENST00000543854 USO1O60763 962 aaKnown RBP21.26■□□□□ 0.99
SPPL3-208ENST00000543854 PHKA2P46019 1235 aa21.26■□□□□ 0.99
SPPL3-208ENST00000543854 CUL4AQ13619 759 aa21.26■□□□□ 0.99
SPPL3-208ENST00000543854 TFDP1Q14186 410 aa21.26■□□□□ 0.99
SPPL3-208ENST00000543854 SPOUT1Q5T280 376 aaKnown RBP21.26■□□□□ 0.99
SPPL3-208ENST00000543854 FAM102BQ5T8I3 360 aa21.26■□□□□ 0.99
SPPL3-208ENST00000543854 LARP1BQ659C4 914 aaKnown RBP21.26■□□□□ 0.99
SPPL3-208ENST00000543854 TWF2Q6IBS0 349 aaKnown RBP21.26■□□□□ 0.99
SPPL3-208ENST00000543854 RNF169Q8NCN4 708 aa21.26■□□□□ 0.99
SPPL3-208ENST00000543854 NACC1Q96RE7 527 aa21.26■□□□□ 0.99
SPPL3-208ENST00000543854 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.26■□□□□ 0.99
SPPL3-208ENST00000543854 LRWD1Q9UFC0 647 aa21.26■□□□□ 0.99
SPPL3-208ENST00000543854 DBR1Q9UK59 544 aaKnown RBP21.26■□□□□ 0.99
SPPL3-208ENST00000543854 STK24Q9Y6E0 443 aa21.26■□□□□ 0.99
SPPL3-208ENST00000543854 SPTBN5Q9NRC6 3674 aaKnown RBP21.25■□□□□ 0.99
SPPL3-208ENST00000543854 A0A0U1RQF3 1178 aa21.25■□□□□ 0.99
SPPL3-208ENST00000543854 MUTP22033 750 aa21.25■□□□□ 0.99
SPPL3-208ENST00000543854 CCT6AP40227 531 aaKnown RBP21.25■□□□□ 0.99
SPPL3-208ENST00000543854 PRPHP41219 470 aa21.25■□□□□ 0.99
SPPL3-208ENST00000543854 P2RX5Q93086 422 aa21.25■□□□□ 0.99
SPPL3-208ENST00000543854 TMEM117Q9H0C3 514 aa21.25■□□□□ 0.99
SPPL3-208ENST00000543854 LMAN2LQ9H0V9 348 aa21.25■□□□□ 0.99
SPPL3-208ENST00000543854 AAASQ9NRG9 546 aa21.25■□□□□ 0.99
SPPL3-208ENST00000543854 AGPAT5Q9NUQ2 364 aa21.25■□□□□ 0.99
SPPL3-208ENST00000543854 A0A087WWV3 80 aa21.24■□□□□ 0.99
SPPL3-208ENST00000543854 ARHGEF35A5YM69 484 aa21.24■□□□□ 0.99
SPPL3-208ENST00000543854 ERLIN2O94905 339 aa21.24■□□□□ 0.99
SPPL3-208ENST00000543854 SKIP12755 728 aa21.24■□□□□ 0.99
SPPL3-208ENST00000543854 MRPS5P82675 430 aaKnown RBP21.24■□□□□ 0.99
SPPL3-208ENST00000543854 NAALADL2Q58DX5 795 aa21.24■□□□□ 0.99
SPPL3-208ENST00000543854 TJAP1Q5JTD0 557 aa21.24■□□□□ 0.99
SPPL3-208ENST00000543854 LRRC43Q8N309 656 aa21.24■□□□□ 0.99
SPPL3-208ENST00000543854 IGSF22Q8N9C0 903 aa21.24■□□□□ 0.99
SPPL3-208ENST00000543854 MCPH1Q8NEM0 835 aa21.24■□□□□ 0.99
SPPL3-208ENST00000543854 TRAIPQ9BWF2 469 aa21.24■□□□□ 0.99
SPPL3-208ENST00000543854 POLR3FQ9H1D9 316 aaPredicted RBP21.24■□□□□ 0.99
SPPL3-208ENST00000543854 COG5Q9UP83 839 aa21.24■□□□□ 0.99
SPPL3-208ENST00000543854 DLL1O00548 723 aa21.23■□□□□ 0.99
SPPL3-208ENST00000543854 GRM6O15303 877 aa21.23■□□□□ 0.99
SPPL3-208ENST00000543854 EOMESO95936 686 aa21.23■□□□□ 0.99
SPPL3-208ENST00000543854 RAB27AP51159 221 aa21.23■□□□□ 0.99
SPPL3-208ENST00000543854 PDIA5Q14554 519 aa21.23■□□□□ 0.99
SPPL3-208ENST00000543854 AAK1Q2M2I8 961 aa21.23■□□□□ 0.99
SPPL3-208ENST00000543854 DTHD1Q6ZMT9 781 aa21.23■□□□□ 0.99
SPPL3-208ENST00000543854 SNX29Q8TEQ0 813 aa21.23■□□□□ 0.99
SPPL3-208ENST00000543854 ASB2Q96Q27 587 aa21.23■□□□□ 0.99
SPPL3-208ENST00000543854 MINDY3Q9H8M7 445 aa21.23■□□□□ 0.99
SPPL3-208ENST00000543854 PCDHB12Q9Y5F1 795 aa21.23■□□□□ 0.99
SPPL3-208ENST00000543854 ATG2AQ2TAZ0 1938 aa21.23■□□□□ 0.99
SPPL3-208ENST00000543854 ATF7P17544 494 aaPredicted RBP21.22■□□□□ 0.99
SPPL3-208ENST00000543854 PDCP20941 246 aa21.22■□□□□ 0.99
SPPL3-208ENST00000543854 ARL2P36404 184 aa21.22■□□□□ 0.99
SPPL3-208ENST00000543854 ATP2C1P98194 919 aaPredicted RBP21.22■□□□□ 0.99
SPPL3-208ENST00000543854 CAPSQ13938 189 aa21.22■□□□□ 0.99
SPPL3-208ENST00000543854 PCBP1Q15365 356 aaKnown RBP eCLIP21.22■□□□□ 0.99
SPPL3-208ENST00000543854 ZNF598Q86UK7 904 aaKnown RBP21.22■□□□□ 0.99
SPPL3-208ENST00000543854 KLHL23Q8NBE8 558 aa21.22■□□□□ 0.99
SPPL3-208ENST00000543854 ASAP3Q8TDY4 903 aa21.22■□□□□ 0.99
SPPL3-208ENST00000543854 HLA-CQ95604 372 aa21.22■□□□□ 0.99
SPPL3-208ENST00000543854 NSUN3Q9H649 340 aaKnown RBP21.22■□□□□ 0.99
SPPL3-208ENST00000543854 FAM105AQ9NUU6 356 aa21.22■□□□□ 0.99
SPPL3-208ENST00000543854 RNF19AQ9NV58 838 aa21.22■□□□□ 0.99
SPPL3-208ENST00000543854 PLAGL2Q9UPG8 496 aa21.22■□□□□ 0.99
SPPL3-208ENST00000543854 CUL9Q8IWT3 2517 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms