RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 FRMPD3Q5JV73 1810 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 SCN10AQ9Y5Y9 1956 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 BICDL2A1A5D9 508 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 C17orf102A2RUQ5 167 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 MOXD2PA6NHM9 499 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 LRRIQ4A6NIV6 560 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 KBTBD13C9JR72 458 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 H0YCG3 227 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 ASAP2O43150 1006 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 PRPF6O94906 941 aaKnown RBP11.76□□□□□ -0.53
DDB1-221ENST00000543162 CCNE1P24864 410 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 NAMPTP43490 491 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 NCKAP1LP55160 1127 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 TPM4P67936 248 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 LAMTOR4Q0VGL1 99 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 MKRN4PQ13434 485 aaPredicted RBP11.76□□□□□ -0.53
DDB1-221ENST00000543162 DRP2Q13474 957 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 TPD52L1Q16890 204 aaPredicted RBP11.76□□□□□ -0.53
DDB1-221ENST00000543162 BMT2Q1RMZ1 405 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 ZC2HC1CQ53FD0 456 aaPredicted RBP11.76□□□□□ -0.53
DDB1-221ENST00000543162 FAM47CQ5HY64 1035 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 SPATA1Q5VX52 437 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 CENPPQ6IPU0 288 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 NFRKBQ6P4R8 1299 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 HAUS6Q7Z4H7 955 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 NELFCDQ8IXH7 590 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 DEPTORQ8TB45 409 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 ZNF507Q8TCN5 953 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 DEFB118Q96PH6 123 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 MAP7D2Q96T17 732 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 TSG101Q99816 390 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 ST6GALNAC4Q9H4F1 302 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 UBE4BO95155 1302 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 EVPLQ92817 2033 aa11.76□□□□□ -0.53
DDB1-221ENST00000543162 MBLAC1A4D2B0 266 aaPredicted RBP11.75□□□□□ -0.53
DDB1-221ENST00000543162 PPP1R37O75864 691 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 CYP2C9P11712 490 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 SCP2P22307 547 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 ABCD1P33897 745 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 GTF2BQ00403 316 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 CAPSQ13938 189 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 TFDP1Q14186 410 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 NCAPHQ15003 741 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 KNOP1Q1ED39 458 aaKnown RBP11.75□□□□□ -0.53
DDB1-221ENST00000543162 ANKRD40Q6AI12 368 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 RHPN2Q8IUC4 686 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 SYCP3Q8IZU3 236 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 LINC01465Q8N7H1 131 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 TMEM161BQ8NDZ6 487 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 HVCN1Q96D96 273 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 ZNF333Q96JL9 665 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 GLT1D1Q96MS3 346 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 ACCSQ96QU6 501 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 MED15Q96RN5 788 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 KIFC3Q9BVG8 833 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 STRA6Q9BX79 667 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 SEMA6BQ9H3T3 888 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 GRPEL1Q9HAV7 217 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 AKT3Q9Y243 479 aa11.75□□□□□ -0.53
DDB1-221ENST00000543162 SMIM35A0A1B0GVV1 85 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 DENND3A2RUS2 1198 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 TRIM49BA6NDI0 452 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 DNM1LO00429 736 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 TREHO43280 583 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 GJB1P08034 283 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 SRGAP2CP0DJJ0 459 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 HOXC8P31273 242 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 HOXD13P35453 343 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 MRE11P49959 708 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 EFNA5P52803 228 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 PMS1P54277 932 aaKnown RBP11.74□□□□□ -0.53
DDB1-221ENST00000543162 ADAM17P78536 824 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 ZNF200P98182 395 aaPredicted RBP11.74□□□□□ -0.53
DDB1-221ENST00000543162 LRRC63Q05C16 580 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 KCNA1Q09470 495 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 ITGA7Q13683 1181 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 HIC1Q14526 733 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 UVSSAQ2YD98 709 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 TTI2Q6NXR4 508 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 SESTD1Q86VW0 696 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 KSR1Q8IVT5 923 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 KIAA0319LQ8IZA0 1049 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 RNF149Q8NC42 400 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 ARMC5Q96C12 935 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 NLRP4Q96MN2 994 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 FAM49AQ9H0Q0 323 aaPredicted RBP11.74□□□□□ -0.53
DDB1-221ENST00000543162 C2orf40Q9H1Z8 148 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 KCTD10Q9H3F6 313 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 TMEM206Q9H813 350 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 ARHGAP28Q9P2N2 729 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 GTF2IRD1Q9UHL9 959 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 TBX20Q9UMR3 447 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 EXOC7Q9UPT5 735 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 PHF24Q9UPV7 400 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 NFE2L3Q9Y4A8 694 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 ADGRA3Q8IWK6 1321 aa11.74□□□□□ -0.53
DDB1-221ENST00000543162 A0A1W2PQ45 241 aaPredicted RBP11.73□□□□□ -0.53
DDB1-221ENST00000543162 A0A1W2PQY0 241 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 K7ERI5 159 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms