RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 HIP1RO75146 1068 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 CD52P31358 61 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 MAPK7Q13164 816 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 PAK2Q13177 524 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 CAPSQ13938 189 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 TCTN1Q2MV58 587 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 ODR4Q5SWX8 454 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 FAM43BQ6ZT52 329 aaPredicted RBP18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 SV2BQ7L1I2 683 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 OTOP2Q7RTS6 562 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 DAW1Q8N136 415 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 IQUBQ8NA54 791 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 DHX58Q96C10 678 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 DRC1Q96MC2 740 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 PYM1Q9BRP8 204 aaKnown RBP18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 INO80BQ9C086 356 aaPredicted RBP18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 CUEDC2Q9H467 287 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 POLD4Q9HCU8 107 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 ERVK-5Q9HDB9 667 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 KCNH3Q9ULD8 1083 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 PADI3Q9ULW8 664 aa18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 COLQQ9Y215 455 aaPredicted RBP18.96■□□□□ 0.63
RABGGTA-203ENST00000543002 FAM237AA0A1B0GTK4 181 aa18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 ABHD14A-ACY1A0A1B0GW23 586 aa18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 GPR182O15218 404 aa18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 POLR2DO15514 142 aaKnown RBP18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 BAIAP3O94812 1187 aa18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 PFKFB1P16118 471 aa18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 PHKA2P46019 1235 aa18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 IKBKEQ14164 716 aa18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 PPP2R5AQ15172 486 aa18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 CSPP1Q1MSJ5 1256 aa18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 RASIP1Q5U651 963 aa18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 SRGAP1Q7Z6B7 1085 aa18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 FAM228AQ86W67 206 aa18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 IFNLR1Q8IU57 520 aaPredicted RBP18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 TDHQ8IZJ6 230 aa18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 BSNDQ8WZ55 320 aa18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 HPSEQ9Y251 543 aa18.95■□□□□ 0.62
RABGGTA-203ENST00000543002 NPHP3-ACAD11A0A0J9YXS1 232 aa18.94■□□□□ 0.62
RABGGTA-203ENST00000543002 A0A1B0GVL5 298 aa18.94■□□□□ 0.62
RABGGTA-203ENST00000543002 A0A1W2PPC1 479 aa18.94■□□□□ 0.62
RABGGTA-203ENST00000543002 EFCAB14O75071 495 aa18.94■□□□□ 0.62
RABGGTA-203ENST00000543002 NAMPTP43490 491 aa18.94■□□□□ 0.62
RABGGTA-203ENST00000543002 PTENP60484 403 aa18.94■□□□□ 0.62
RABGGTA-203ENST00000543002 RAD51AP2Q09MP3 1159 aa18.94■□□□□ 0.62
RABGGTA-203ENST00000543002 NFX1Q12986 1120 aaKnown RBP18.94■□□□□ 0.62
RABGGTA-203ENST00000543002 IFT74Q96LB3 600 aa18.94■□□□□ 0.62
RABGGTA-203ENST00000543002 RNPC3Q96LT9 517 aaKnown RBP18.94■□□□□ 0.62
RABGGTA-203ENST00000543002 NFKBIZQ9BYH8 718 aa18.94■□□□□ 0.62
RABGGTA-203ENST00000543002 MTIF3Q9H2K0 278 aaKnown RBP18.94■□□□□ 0.62
RABGGTA-203ENST00000543002 C17orf75Q9HAS0 396 aa18.94■□□□□ 0.62
RABGGTA-203ENST00000543002 ODF2LQ9ULJ1 636 aa18.94■□□□□ 0.62
RABGGTA-203ENST00000543002 ST3GAL5Q9UNP4 418 aa18.94■□□□□ 0.62
RABGGTA-203ENST00000543002 GOLGA6L4A6NEF3 574 aa18.93■□□□□ 0.62
RABGGTA-203ENST00000543002 LRRIQ4A6NIV6 560 aa18.93■□□□□ 0.62
RABGGTA-203ENST00000543002 CSDE1O75534 798 aaKnown RBP18.93■□□□□ 0.62
RABGGTA-203ENST00000543002 GIT2Q14161 759 aa18.93■□□□□ 0.62
RABGGTA-203ENST00000543002 FSIP1Q8NA03 581 aa18.93■□□□□ 0.62
RABGGTA-203ENST00000543002 MRPS27Q92552 414 aaKnown RBP18.93■□□□□ 0.62
RABGGTA-203ENST00000543002 REEP2Q9BRK0 252 aa18.93■□□□□ 0.62
RABGGTA-203ENST00000543002 FTHL17Q9BXU8 183 aa18.93■□□□□ 0.62
RABGGTA-203ENST00000543002 TNMDQ9H2S6 317 aa18.93■□□□□ 0.62
RABGGTA-203ENST00000543002 MAGEF1Q9HAY2 307 aa18.93■□□□□ 0.62
RABGGTA-203ENST00000543002 KBTBD4Q9NVX7 518 aa18.93■□□□□ 0.62
RABGGTA-203ENST00000543002 MYMKA6NI61 221 aa18.92■□□□□ 0.62
RABGGTA-203ENST00000543002 KRT18P05783 430 aaKnown RBP18.92■□□□□ 0.62
RABGGTA-203ENST00000543002 SFPQP23246 707 aaKnown RBP eCLIP18.92■□□□□ 0.62
RABGGTA-203ENST00000543002 NDUFA8P51970 172 aa18.92■□□□□ 0.62
RABGGTA-203ENST00000543002 CACNB1Q02641 598 aaPredicted RBP18.92■□□□□ 0.62
RABGGTA-203ENST00000543002 TPRNQ4KMQ1 711 aa18.92■□□□□ 0.62
RABGGTA-203ENST00000543002 CDCA2Q69YH5 1023 aaPredicted RBP18.92■□□□□ 0.62
RABGGTA-203ENST00000543002 TMEM87AQ8NBN3 555 aa18.92■□□□□ 0.62
RABGGTA-203ENST00000543002 DDX12PQ92771 950 aa18.92■□□□□ 0.62
RABGGTA-203ENST00000543002 LRRC27Q9C0I9 530 aa18.92■□□□□ 0.62
RABGGTA-203ENST00000543002 TMX1Q9H3N1 280 aa18.92■□□□□ 0.62
RABGGTA-203ENST00000543002 MINDY3Q9H8M7 445 aa18.92■□□□□ 0.62
RABGGTA-203ENST00000543002 CXXC1Q9P0U4 656 aaPredicted RBP18.92■□□□□ 0.62
RABGGTA-203ENST00000543002 USP25Q9UHP3 1055 aa18.92■□□□□ 0.62
RABGGTA-203ENST00000543002 SFI1A8K8P3 1242 aa18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 ZBBXA8MT70 800 aa18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 PLS3P13797 630 aa18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 FGFR4P22455 802 aa18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 SYKP43405 635 aa18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 ZNF131P52739 623 aa18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 PEX3P56589 373 aa18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 WDR5P61964 334 aaKnown RBP18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 DMP1Q13316 513 aaPredicted RBP18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 PCBP1Q15365 356 aaKnown RBP eCLIP18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 CLEC17AQ6ZS10 378 aa18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 ZBTB8OSQ8IWT0 167 aa18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 DEPTORQ8TB45 409 aa18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 C2orf40Q9H1Z8 148 aa18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 GOLPH3LQ9H4A5 285 aa18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 KCNG1Q9UIX4 513 aa18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 SLC4A7Q9Y6M7 1214 aa18.91■□□□□ 0.62
RABGGTA-203ENST00000543002 INO80B-WBP1J3KQ70 363 aa18.9■□□□□ 0.62
RABGGTA-203ENST00000543002 ACTN4O43707 911 aaKnown RBP18.9■□□□□ 0.62
RABGGTA-203ENST00000543002 FAM13AO94988 1023 aa18.9■□□□□ 0.62
RABGGTA-203ENST00000543002 SLFN14P0C7P3 912 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms