RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 TRAPPC10P48553 1259 aa19.49■□□□□ 0.71
LTBR-210ENST00000542830 KCNQ1P51787 676 aa19.49■□□□□ 0.71
LTBR-210ENST00000542830 CSPP1Q1MSJ5 1256 aa19.49■□□□□ 0.71
LTBR-210ENST00000542830 ABI1Q8IZP0 508 aa19.49■□□□□ 0.71
LTBR-210ENST00000542830 ZNF579Q8NAF0 562 aaKnown RBP19.49■□□□□ 0.71
LTBR-210ENST00000542830 KLHL23Q8NBE8 558 aa19.49■□□□□ 0.71
LTBR-210ENST00000542830 ANKEF1Q9NU02 776 aa19.49■□□□□ 0.71
LTBR-210ENST00000542830 MYO7AQ13402 2215 aa19.48■□□□□ 0.71
LTBR-210ENST00000542830 FNDC1Q4ZHG4 1894 aaPredicted RBP19.48■□□□□ 0.71
LTBR-210ENST00000542830 TNFRSF10AO00220 468 aa19.48■□□□□ 0.71
LTBR-210ENST00000542830 CSDE1O75534 798 aaKnown RBP19.48■□□□□ 0.71
LTBR-210ENST00000542830 EOMESO95936 686 aa19.48■□□□□ 0.71
LTBR-210ENST00000542830 ITGB1P05556 798 aa19.48■□□□□ 0.71
LTBR-210ENST00000542830 FGFR1P11362 822 aa19.48■□□□□ 0.71
LTBR-210ENST00000542830 SKIP12755 728 aa19.48■□□□□ 0.71
LTBR-210ENST00000542830 EMC2Q15006 297 aa19.48■□□□□ 0.71
LTBR-210ENST00000542830 NOSTRINQ8IVI9 506 aa19.48■□□□□ 0.71
LTBR-210ENST00000542830 KSR1Q8IVT5 923 aa19.48■□□□□ 0.71
LTBR-210ENST00000542830 RSPH1Q8WYR4 309 aa19.48■□□□□ 0.71
LTBR-210ENST00000542830 PPP2R3CQ969Q6 453 aa19.48■□□□□ 0.71
LTBR-210ENST00000542830 CCDC43Q96MW1 224 aaKnown RBP19.48■□□□□ 0.71
LTBR-210ENST00000542830 MTRQ99707 1265 aa19.48■□□□□ 0.71
LTBR-210ENST00000542830 TRAIPQ9BWF2 469 aa19.48■□□□□ 0.71
LTBR-210ENST00000542830 TMEM60Q9H2L4 133 aa19.48■□□□□ 0.71
LTBR-210ENST00000542830 ALG13Q9NP73 1137 aaKnown RBP19.48■□□□□ 0.71
LTBR-210ENST00000542830 NOL7Q9UMY1 257 aaKnown RBP19.48■□□□□ 0.71
LTBR-210ENST00000542830 LAG3P18627 525 aa19.47■□□□□ 0.71
LTBR-210ENST00000542830 UBE3AQ05086 875 aa19.47■□□□□ 0.71
LTBR-210ENST00000542830 LEXMQ3ZCV2 418 aa19.47■□□□□ 0.71
LTBR-210ENST00000542830 TTC38Q5R3I4 469 aa19.47■□□□□ 0.71
LTBR-210ENST00000542830 CATSPER4Q7RTX7 472 aa19.47■□□□□ 0.71
LTBR-210ENST00000542830 SRGAP1Q7Z6B7 1085 aa19.47■□□□□ 0.71
LTBR-210ENST00000542830 LRRC43Q8N309 656 aa19.47■□□□□ 0.71
LTBR-210ENST00000542830 SPPL3Q8TCT6 385 aa19.47■□□□□ 0.71
LTBR-210ENST00000542830 PRPF31Q8WWY3 499 aaKnown RBP19.47■□□□□ 0.71
LTBR-210ENST00000542830 TMEM143Q96AN5 459 aa19.47■□□□□ 0.71
LTBR-210ENST00000542830 PABPC5Q96DU9 382 aaKnown RBP19.47■□□□□ 0.71
LTBR-210ENST00000542830 CASD1Q96PB1 797 aa19.47■□□□□ 0.71
LTBR-210ENST00000542830 IFT122Q9HBG6 1241 aa19.47■□□□□ 0.71
LTBR-210ENST00000542830 TYW1Q9NV66 732 aaKnown RBP19.47■□□□□ 0.71
LTBR-210ENST00000542830 POTEMA6NI47 508 aa19.46■□□□□ 0.71
LTBR-210ENST00000542830 DGAT1O75907 488 aa19.46■□□□□ 0.71
LTBR-210ENST00000542830 OR52Z1P0C646 297 aa19.46■□□□□ 0.71
LTBR-210ENST00000542830 XRCC6P12956 609 aaKnown RBP eCLIP19.46■□□□□ 0.71
LTBR-210ENST00000542830 KCNA5P22460 613 aa19.46■□□□□ 0.71
LTBR-210ENST00000542830 MCM2P49736 904 aa19.46■□□□□ 0.71
LTBR-210ENST00000542830 LAMTOR4Q0VGL1 99 aa19.46■□□□□ 0.71
LTBR-210ENST00000542830 MXD4Q14582 209 aaPredicted RBP19.46■□□□□ 0.71
LTBR-210ENST00000542830 COL19A1Q14993 1142 aa19.46■□□□□ 0.71
LTBR-210ENST00000542830 TWF2Q6IBS0 349 aaKnown RBP19.46■□□□□ 0.71
LTBR-210ENST00000542830 ZNF598Q86UK7 904 aaKnown RBP19.46■□□□□ 0.71
LTBR-210ENST00000542830 FERMT3Q86UX7 667 aa19.46■□□□□ 0.71
LTBR-210ENST00000542830 ERMNQ8TAM6 284 aa19.46■□□□□ 0.71
LTBR-210ENST00000542830 TUFT1Q9NNX1 390 aa19.46■□□□□ 0.71
LTBR-210ENST00000542830 RNF19AQ9NV58 838 aa19.46■□□□□ 0.71
LTBR-210ENST00000542830 PIN4Q9Y237 131 aaKnown RBP19.46■□□□□ 0.71
LTBR-210ENST00000542830 XIRP2A4UGR9 3374 aa19.46■□□□□ 0.71
LTBR-210ENST00000542830 KIAA1671Q9BY89 1806 aa19.46■□□□□ 0.71
LTBR-210ENST00000542830 ZBTB39O15060 712 aa19.45■□□□□ 0.7
LTBR-210ENST00000542830 SRGAP2CP0DJJ0 459 aa19.45■□□□□ 0.7
LTBR-210ENST00000542830 U2AF2P26368 475 aaKnown RBP eCLIP19.45■□□□□ 0.7
LTBR-210ENST00000542830 PHKA2P46019 1235 aa19.45■□□□□ 0.7
LTBR-210ENST00000542830 RARRES1P49788 294 aa19.45■□□□□ 0.7
LTBR-210ENST00000542830 RAB27AP51159 221 aa19.45■□□□□ 0.7
LTBR-210ENST00000542830 PCBP1Q15365 356 aaKnown RBP eCLIP19.45■□□□□ 0.7
LTBR-210ENST00000542830 ZNF174Q15697 407 aa19.45■□□□□ 0.7
LTBR-210ENST00000542830 PUS10Q3MIT2 529 aaKnown RBP19.45■□□□□ 0.7
LTBR-210ENST00000542830 COLGALT1Q8NBJ5 622 aa19.45■□□□□ 0.7
LTBR-210ENST00000542830 RNF169Q8NCN4 708 aa19.45■□□□□ 0.7
LTBR-210ENST00000542830 POF1BQ8WVV4 589 aa19.45■□□□□ 0.7
LTBR-210ENST00000542830 MRPL9Q9BYD2 267 aaKnown RBP19.45■□□□□ 0.7
LTBR-210ENST00000542830 CWH43Q9H720 699 aa19.45■□□□□ 0.7
LTBR-210ENST00000542830 BMP2KQ9NSY1 1161 aaPredicted RBP19.45■□□□□ 0.7
LTBR-210ENST00000542830 TCF20Q9UGU0 1960 aaKnown RBP19.44■□□□□ 0.7
LTBR-210ENST00000542830 TECP42680 631 aa19.44■□□□□ 0.7
LTBR-210ENST00000542830 CAMK1Q14012 370 aa19.44■□□□□ 0.7
LTBR-210ENST00000542830 TFDP1Q14186 410 aa19.44■□□□□ 0.7
LTBR-210ENST00000542830 THNSL1Q8IYQ7 743 aa19.44■□□□□ 0.7
LTBR-210ENST00000542830 RNF149Q8NC42 400 aa19.44■□□□□ 0.7
LTBR-210ENST00000542830 TMX3Q96JJ7 454 aa19.44■□□□□ 0.7
LTBR-210ENST00000542830 POLR3CQ9BUI4 534 aaPredicted RBP19.44■□□□□ 0.7
LTBR-210ENST00000542830 XPNPEP1Q9NQW7 623 aa19.44■□□□□ 0.7
LTBR-210ENST00000542830 AGPAT5Q9NUQ2 364 aa19.44■□□□□ 0.7
LTBR-210ENST00000542830 FAM105AQ9NUU6 356 aa19.44■□□□□ 0.7
LTBR-210ENST00000542830 ZNF623O75123 536 aa19.43■□□□□ 0.7
LTBR-210ENST00000542830 FGF18O76093 207 aa19.43■□□□□ 0.7
LTBR-210ENST00000542830 ATF7P17544 494 aaPredicted RBP19.43■□□□□ 0.7
LTBR-210ENST00000542830 PPM1AP35813 382 aa19.43■□□□□ 0.7
LTBR-210ENST00000542830 POU5F1BQ06416 359 aa19.43■□□□□ 0.7
LTBR-210ENST00000542830 HYAL1Q12794 435 aa19.43■□□□□ 0.7
LTBR-210ENST00000542830 CLLU1OSQ5K130 101 aa19.43■□□□□ 0.7
LTBR-210ENST00000542830 EP400NLQ6ZTU2 488 aa19.43■□□□□ 0.7
LTBR-210ENST00000542830 TBC1D32Q96NH3 1257 aa19.43■□□□□ 0.7
LTBR-210ENST00000542830 CLDND1Q9NY35 253 aa19.43■□□□□ 0.7
LTBR-210ENST00000542830 LZTS1Q9Y250 596 aa19.43■□□□□ 0.7
LTBR-210ENST00000542830 ARID2Q68CP9 1835 aa19.43■□□□□ 0.7
LTBR-210ENST00000542830 CARNS1A5YM72 827 aa19.42■□□□□ 0.7
LTBR-210ENST00000542830 CSPG5O95196 566 aa19.42■□□□□ 0.7
LTBR-210ENST00000542830 SPATA31C1P0DKV0 1188 aa19.42■□□□□ 0.7
LTBR-210ENST00000542830 MUTP22033 750 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms