RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 GPR162Q16538 588 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 EXOC3L4Q17RC7 722 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 SHROOM1Q2M3G4 852 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 CERKLQ49MI3 558 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 PRR16Q569H4 304 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 CFAP58Q5T655 872 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 ALKBH5Q6P6C2 394 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 LRIG3Q6UXM1 1119 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 KDM7AQ6ZMT4 941 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 TMEM179Q6ZVK1 233 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 TPCN2Q8NHX9 752 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 SLC30A5Q8TAD4 765 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 SEC14L1Q92503 715 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 CCDC43Q96MW1 224 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 KRT12Q99456 494 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 HSD17B14Q9BPX1 270 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 SYT11Q9BT88 431 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 FAM107BQ9H098 131 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 TAF1DQ9H5J8 278 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 SUCLA2Q9P2R7 463 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 PI4KBQ9UBF8 816 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 HCSTQ9UBK5 93 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 AJAP1Q9UKB5 411 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 ZMIZ1Q9ULJ6 1067 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 SYNPO2Q9UMS6 1093 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 COL2A1P02458 1487 aaPredicted RBP5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 ATRNL1Q5VV63 1379 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 NCANO14594 1321 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 UBE4BO95155 1302 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 ATXN2Q99700 1313 aaKnown RBP5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 ESYT3A0FGR9 886 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 RSPH10B2B2RC85 870 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 F5H6K3 240 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 H0YGN5 161 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 CCDC188H7C350 402 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 EML1O00423 815 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 MEIS1O00470 390 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 DDX3XO00571 662 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 FLOT1O75955 427 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 NDUFB10O96000 172 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 RSPH10BP0C881 870 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 FERP16591 822 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 CASP4P49662 377 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 ERVK-9P63128 1117 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 GNGT1P63211 74 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 ARID5AQ03989 594 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 KLRC3Q07444 240 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 CUL1Q13616 776 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 TRADDQ15628 312 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 SYDE2Q5VT97 1194 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 RINT1Q6NUQ1 792 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 PODNQ7Z5L7 613 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 FBXO11Q86XK2 927 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 EFCAB13Q8IY85 973 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 TAF4BQ92750 862 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 SPAG5Q96R06 1193 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 UIMC1Q96RL1 719 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 RUFY1Q96T51 708 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 EIF2AK1Q9BQI3 630 aaKnown RBP5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 PAGR1Q9BTK6 254 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 MKNK1Q9BUB5 465 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 RUSC1Q9BVN2 902 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 PLEKHA4Q9H4M7 779 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 TUFT1Q9NNX1 390 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 DMAC2Q9NW81 257 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 TTC7AQ9ULT0 858 aaPredicted RBP5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 PACSIN2Q9UNF0 486 aaPredicted RBP5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 DAAM1Q9Y4D1 1078 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 NFS1Q9Y697 457 aa5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 RBBP6Q7Z6E9 1792 aaKnown RBP5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 COL11A2P13942 1736 aaPredicted RBP5.66□□□□□ -1.5
ATPAF1-212ENST00000542495 FRMPD4Q14CM0 1322 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 A0A087WUV0 522 aaPredicted RBP5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 SPDYE3A6NKU9 549 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 HMGB1P1B2RPK0 211 aaPredicted RBP5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 PGRMC1O00264 195 aaKnown RBP5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 EBAG9O00559 213 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 KCNK3O14649 394 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 PSMD10O75832 226 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 KRT14P02533 472 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 H2AFZP0C0S5 128 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 MUTP22033 750 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 ALDH1B1P30837 517 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 CCT5P48643 541 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 ZNF131P52739 623 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 C1QTNF8P60827 252 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 JAG1P78504 1218 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 POU5F1Q01860 360 aaKnown RBP5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 ICA1Q05084 483 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 PPP2R5CQ13362 524 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 ELOAQ14241 798 aaKnown RBP5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 DACT2Q5SW24 774 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 TMEM164Q5U3C3 297 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 STRIP1Q5VSL9 837 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 C1orf186Q6ZWK4 172 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 H2AFVQ71UI9 128 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 OTOP1Q7RTM1 612 aa5.65□□□□□ -1.5
ATPAF1-212ENST00000542495 NT5DC3Q86UY8 548 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms