RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 ARL2P36404 184 aa22.34■■□□□ 1.17
CACNA2D4-215ENST00000542340 SRGAP1Q7Z6B7 1085 aa22.34■■□□□ 1.17
CACNA2D4-215ENST00000542340 SNX29Q8TEQ0 813 aa22.34■■□□□ 1.17
CACNA2D4-215ENST00000542340 C17orf80Q9BSJ5 609 aa22.34■■□□□ 1.17
CACNA2D4-215ENST00000542340 TMEM161AQ9NX61 479 aa22.34■■□□□ 1.17
CACNA2D4-215ENST00000542340 MTUS1Q9ULD2 1270 aa22.34■■□□□ 1.17
CACNA2D4-215ENST00000542340 USO1O60763 962 aaKnown RBP22.33■■□□□ 1.17
CACNA2D4-215ENST00000542340 POU5F1BQ06416 359 aa22.33■■□□□ 1.17
CACNA2D4-215ENST00000542340 BTG3Q14201 252 aaPredicted RBP22.33■■□□□ 1.17
CACNA2D4-215ENST00000542340 ECM1Q16610 540 aa22.33■■□□□ 1.17
CACNA2D4-215ENST00000542340 CMTR2Q8IYT2 770 aaKnown RBP22.33■■□□□ 1.17
CACNA2D4-215ENST00000542340 RNF149Q8NC42 400 aa22.33■■□□□ 1.17
CACNA2D4-215ENST00000542340 MCPH1Q8NEM0 835 aa22.33■■□□□ 1.17
CACNA2D4-215ENST00000542340 DACT1Q9NYF0 836 aa22.33■■□□□ 1.17
CACNA2D4-215ENST00000542340 KIAA1024Q9UPX6 916 aa22.33■■□□□ 1.17
CACNA2D4-215ENST00000542340 ARHGEF35A5YM69 484 aa22.32■■□□□ 1.16
CACNA2D4-215ENST00000542340 GTPBP6O43824 516 aaPredicted RBP22.32■■□□□ 1.16
CACNA2D4-215ENST00000542340 GRB10Q13322 594 aa22.32■■□□□ 1.16
CACNA2D4-215ENST00000542340 TFDP1Q14186 410 aa22.32■■□□□ 1.16
CACNA2D4-215ENST00000542340 EPC2Q52LR7 807 aa22.32■■□□□ 1.16
CACNA2D4-215ENST00000542340 CATSPER4Q7RTX7 472 aa22.32■■□□□ 1.16
CACNA2D4-215ENST00000542340 TMEM192Q8IY95 271 aa22.32■■□□□ 1.16
CACNA2D4-215ENST00000542340 FBXO22Q8NEZ5 403 aa22.32■■□□□ 1.16
CACNA2D4-215ENST00000542340 CLP1Q92989 425 aaKnown RBP22.32■■□□□ 1.16
CACNA2D4-215ENST00000542340 DDX19AQ9NUU7 478 aaKnown RBP22.32■■□□□ 1.16
CACNA2D4-215ENST00000542340 A0A0U1RQF3 1178 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 VWA3AA6NCI4 1184 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 PP2D1A8MPX8 630 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 LPXNO60711 386 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 CYP11B2P19099 503 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 IBSPP21815 317 aaPredicted RBP22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 CDC25AP30304 524 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 PHKA2P46019 1235 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 PTENP60484 403 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 RESTQ13127 1097 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 PADI6Q6TGC4 694 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 ECHDC2Q86YB7 292 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 IFNLR1Q8IU57 520 aaPredicted RBP22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 ASAP3Q8TDY4 903 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 MMTAG2Q9BU76 263 aaKnown RBP22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 TRAIPQ9BWF2 469 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 LMCD1Q9NZU5 365 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 MTMR6Q9Y217 621 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 RWDD3Q9Y3V2 267 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 MTCH2Q9Y6C9 303 aa22.31■■□□□ 1.16
CACNA2D4-215ENST00000542340 STX6O43752 255 aa22.3■■□□□ 1.16
CACNA2D4-215ENST00000542340 LINC00271P0C7V0 271 aa22.3■■□□□ 1.16
CACNA2D4-215ENST00000542340 GLRA2P23416 452 aa22.3■■□□□ 1.16
CACNA2D4-215ENST00000542340 CAPSQ13938 189 aa22.3■■□□□ 1.16
CACNA2D4-215ENST00000542340 PCBP1Q15365 356 aaKnown RBP eCLIP22.3■■□□□ 1.16
CACNA2D4-215ENST00000542340 SF3A1Q15459 793 aaKnown RBP22.3■■□□□ 1.16
CACNA2D4-215ENST00000542340 KCTD17Q8N5Z5 321 aa22.3■■□□□ 1.16
CACNA2D4-215ENST00000542340 POLR3FQ9H1D9 316 aaPredicted RBP22.3■■□□□ 1.16
CACNA2D4-215ENST00000542340 BHMT2Q9H2M3 363 aa22.3■■□□□ 1.16
CACNA2D4-215ENST00000542340 MINDY3Q9H8M7 445 aa22.3■■□□□ 1.16
CACNA2D4-215ENST00000542340 DNM3Q9UQ16 869 aa22.3■■□□□ 1.16
CACNA2D4-215ENST00000542340 PIN4Q9Y237 131 aaKnown RBP22.3■■□□□ 1.16
CACNA2D4-215ENST00000542340 C5orf67F2Z3F1 127 aa22.29■■□□□ 1.16
CACNA2D4-215ENST00000542340 HOXA2O43364 376 aa22.29■■□□□ 1.16
CACNA2D4-215ENST00000542340 EOMESO95936 686 aa22.29■■□□□ 1.16
CACNA2D4-215ENST00000542340 RB1P06400 928 aa22.29■■□□□ 1.16
CACNA2D4-215ENST00000542340 BMPR1AP36894 532 aa22.29■■□□□ 1.16
CACNA2D4-215ENST00000542340 HYIQ5T013 277 aa22.29■■□□□ 1.16
CACNA2D4-215ENST00000542340 FAM102BQ5T8I3 360 aa22.29■■□□□ 1.16
CACNA2D4-215ENST00000542340 GDPD5Q8WTR4 605 aa22.29■■□□□ 1.16
CACNA2D4-215ENST00000542340 AK8Q96MA6 479 aa22.29■■□□□ 1.16
CACNA2D4-215ENST00000542340 NFKBIZQ9BYH8 718 aa22.29■■□□□ 1.16
CACNA2D4-215ENST00000542340 ZSCAN16Q9H4T2 348 aaPredicted RBP22.29■■□□□ 1.16
CACNA2D4-215ENST00000542340 AGPAT5Q9NUQ2 364 aa22.29■■□□□ 1.16
CACNA2D4-215ENST00000542340 MRPL42Q9Y6G3 142 aaKnown RBP22.29■■□□□ 1.16
CACNA2D4-215ENST00000542340 H3BNC9 293 aa22.28■■□□□ 1.16
CACNA2D4-215ENST00000542340 EYA4O95677 639 aa22.28■■□□□ 1.16
CACNA2D4-215ENST00000542340 HSP90AA1P07900 732 aaKnown RBP22.28■■□□□ 1.16
CACNA2D4-215ENST00000542340 SKIP12755 728 aa22.28■■□□□ 1.16
CACNA2D4-215ENST00000542340 PDIA4P13667 645 aaKnown RBP22.28■■□□□ 1.16
CACNA2D4-215ENST00000542340 GATMP50440 423 aa22.28■■□□□ 1.16
CACNA2D4-215ENST00000542340 PAN2Q504Q3 1202 aaKnown RBP22.28■■□□□ 1.16
CACNA2D4-215ENST00000542340 TWF2Q6IBS0 349 aaKnown RBP22.28■■□□□ 1.16
CACNA2D4-215ENST00000542340 MAEAQ7L5Y9 396 aa22.28■■□□□ 1.16
CACNA2D4-215ENST00000542340 ZNF598Q86UK7 904 aaKnown RBP22.28■■□□□ 1.16
CACNA2D4-215ENST00000542340 GPRC5CQ9NQ84 441 aa22.28■■□□□ 1.16
CACNA2D4-215ENST00000542340 TBKBP1A7MCY6 615 aa22.27■■□□□ 1.16
CACNA2D4-215ENST00000542340 E9PMD0 336 aa22.27■■□□□ 1.16
CACNA2D4-215ENST00000542340 SLC26A4O43511 780 aa22.27■■□□□ 1.16
CACNA2D4-215ENST00000542340 FGFR1P11362 822 aa22.27■■□□□ 1.16
CACNA2D4-215ENST00000542340 CTNNB1P35222 781 aa22.27■■□□□ 1.16
CACNA2D4-215ENST00000542340 PLVAPQ9BX97 442 aa22.27■■□□□ 1.16
CACNA2D4-215ENST00000542340 TMEM117Q9H0C3 514 aa22.27■■□□□ 1.16
CACNA2D4-215ENST00000542340 NT5C3AQ9H0P0 336 aa22.27■■□□□ 1.16
CACNA2D4-215ENST00000542340 INO80B-WBP1J3KQ70 363 aa22.26■■□□□ 1.15
CACNA2D4-215ENST00000542340 ZNF623O75123 536 aa22.26■■□□□ 1.15
CACNA2D4-215ENST00000542340 ERLIN2O94905 339 aa22.26■■□□□ 1.15
CACNA2D4-215ENST00000542340 AXLP30530 894 aa22.26■■□□□ 1.15
CACNA2D4-215ENST00000542340 HOXA11P31270 313 aaPredicted RBP22.26■■□□□ 1.15
CACNA2D4-215ENST00000542340 LONP1P36776 959 aaKnown RBP22.26■■□□□ 1.15
CACNA2D4-215ENST00000542340 RAB27AP51159 221 aa22.26■■□□□ 1.15
CACNA2D4-215ENST00000542340 GPM6BQ13491 265 aa22.26■■□□□ 1.15
CACNA2D4-215ENST00000542340 CCDC85BQ15834 202 aaPredicted RBP22.26■■□□□ 1.15
CACNA2D4-215ENST00000542340 SLC17A8Q8NDX2 589 aa22.26■■□□□ 1.15
CACNA2D4-215ENST00000542340 PPM1EQ8WY54 764 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms